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Transmembrane helices for mettm (Methanobacterium thermoautotrophicum )
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 176 | MTH959 | 3 | in | 54 | |ali|phd|phdHtm| | 162 | 3 | 5 | -3.27 | 78,106,153 | MVEIALGTALAAIGAGVAVG |
| 177 | MTH386 | 3 | in | 28 | |ali|phd|phdHtm| | 86 | 9 | 0 | -9.89 | 19,56,78 | VLIMLIQITGIIVVLMALRT |
| 178 | MTH1706 | 3 | in | 23 | |ali|phd|phdHtm| | 105 | 9 | 1 | -12.66 | 26,61,83 | MNARDKKFMTAGIIIALIIA |
| 179 | MTH1393 | 3 | in | 22 | |ali|phd|phdHtm| | 338 | 9 | 1 | -11.52 | 87,133,265 | VNLQMKPRVMILLGSASDFR |
| 180 | MTH630 | 3 | in | 7 | |ali|phd|phdHtm| | 83 | 3 | 7 | -3.17 | 19,53,83 | LNYFVFALLAALMFGLAPVF |
| 181 | MTH1373 | 3 | in | 2 | |ali|phd|phdHtm| | 183 | 9 | 9 | -10.74 | 41,106,156 | LKYRREFFRQLIHATGIVFV |
| 182 | MTH86 | 3 | in | 2 | |ali|phd|phdHtm| | 138 | 5 | 9 | -5.84 | 37,81,127 | LWWGDWRKRMGGSMLGLRII |
| 183 | MTH1030 | 3 | in | 1 | |ali|phd|phdHtm| | 240 | 9 | 5 | -17.03 | 23,193,221 | MRASTLLIIAGMFIVSLYAL |
| 184 | MTH1518 | 3 | in | 1 | |ali|phd|phdHtm| | 133 | 6 | 8 | -6.91 | 69,109,131 | MKVKCEECGETYTLNDGEDP |
| 185 | MTH180 | 3 | in | 1 | |ali|phd|phdHtm| | 402 | 9 | 1 | -21.29 | 201,357,381 | LMVMDYLLRKILGFFLGYRV |
| 186 | MTH1848 | 3 | in | 1 | |ali|phd|phdHtm| | 365 | 1 | 1 | -1.83 | 27,131,164 | VPFSILDILGMAAFILLIIL |
| 187 | MTH1908 | 3 | in | 1 | |ali|phd|phdHtm| | 97 | 5 | 9 | -5.51 | 32,54,89 | MDIEAKMTALHVPAGIVAAV |
| 188 | MTH354 | 3 | in | 1 | |ali|phd|phdHtm| | 297 | 2 | 1 | -2.63 | 25,84,154 | MEPFIKAGLVLITLILGSVP |
| 189 | MTH466 | 3 | in | 1 | |ali|phd|phdHtm| | 289 | 3 | 2 | -3.33 | 98,120,243 | MAYLICENCNHYWQINSEEE |
| 190 | MTH484 | 3 | in | 1 | |ali|phd|phdHtm| | 93 | 9 | 9 | -16.67 | 18,57,79 | MIILIMKTVAFIFMLLAAVL |
| 191 | MTH80 | 3 | in | 1 | |ali|phd|phdHtm| | 81 | 2 | 9 | -2.38 | 26,48,79 | LDYESLLDILYSLLCLDIIL |
| 192 | MTH78 | 3 | out | 70 | |ali|phd|phdHtm| | 80 | 9 | 4 | 16.92 | 32,54,80 | MMVKYIFYFSYFLSYFTAAL |
| 193 | MTH431 | 3 | out | 40 | |ali|phd|phdHtm| | 268 | 9 | 5 | 15.32 | 31,56,256 | VNTMDVLGVTVMLALFILLL |
| 194 | MTH276 | 3 | out | 20 | |ali|phd|phdHtm| | 128 | 2 | 6 | 2.09 | 27,49,80 | LKMAFIMEPVLTINFIFCMI |
| 195 | MTH520 | 3 | out | 14 | |ali|phd|phdHtm| | 104 | 2 | 9 | 2.69 | 34,57,95 | MADAPETSRTLELVLGVIGG |
| 196 | MTH1652 | 3 | out | 9 | |ali|phd|phdHtm| | 121 | 6 | 9 | 6.70 | 34,74,106 | MKRAYVLLIGLSMLLISLIV |
| 197 | MTH1255 | 3 | out | 8 | |ali|phd|phdHtm| | 89 | 0 | 9 | 0.67 | 22,58,82 | MEGLSFLILIVIATFIVAGG |
| 198 | MTH1247 | 3 | out | 5 | |ali|phd|phdHtm| | 120 | 9 | 1 | 11.63 | 34,56,102 | MMISLQLASLLTAGSLMVIG |
| 199 | MTH1331 | 3 | out | 5 | |ali|phd|phdHtm| | 121 | 0 | 9 | 0.98 | 34,68,106 | MKRAYVLLIGLSMLLISLIV |
| 200 | MTH64 | 3 | out | 4 | |ali|phd|phdHtm| | 92 | 3 | 4 | 3.49 | 27,58,89 | MQHTSKLFYFFGVVIVFYNF |
| 201 | MTH137 | 3 | out | 3 | |ali|phd|phdHtm| | 116 | 5 | 5 | 5.10 | 25,58,92 | VRSSVGEFMIYQVIGTVIGI |
| 202 | MTH444 | 3 | out | 3 | |ali|phd|phdHtm| | 373 | 9 | 3 | 17.87 | 65,93,122 | MEFFAVSLDSHVFSHIKEIF |
| 203 | MTH1244 | 3 | out | 2 | |ali|phd|phdHtm| | 102 | 7 | 9 | 7.33 | 34,60,84 | VVPVSESLRGLMATVALGLF |
| 204 | MTH1472 | 3 | out | 2 | |ali|phd|phdHtm| | 132 | 1 | 6 | 1.27 | 38,66,110 | MASSGTSKLLKGSFLIMIGN |
| 205 | MTH1804 | 3 | out | 2 | |ali|phd|phdHtm| | 143 | 1 | 6 | 1.89 | 32,98,138 | MGYSVMAGGPDIRILLFSVP |
| 206 | MTH73 | 3 | out | 2 | |ali|phd|phdHtm| | 316 | 2 | 2 | 2.41 | 159,191,287 | LSGHQTPQSSMQRLFPYNGS |
| 207 | MTH1022 | 3 | out | 1 | |ali|phd|phdHtm| | 279 | 9 | 4 | 10.38 | 40,145,182 | MFLDPVINFFGTVLEMFRSG |
| 208 | MTH1250 | 3 | out | 1 | |ali|phd|phdHtm| | 86 | 9 | 9 | 16.08 | 24,54,81 | MMDILIIAEYTLLASLAVFS |
| 209 | MTH1436 | 3 | out | 1 | |ali|phd|phdHtm| | 104 | 9 | 8 | 14.16 | 32,55,90 | MGYSILPAIPVTGLYMVTYL |
| 210 | MTH1439 | 3 | out | 1 | |ali|phd|phdHtm| | 105 | 5 | 9 | 5.53 | 38,69,101 | MRGRGAHDFIQDQNFTFLAI |
| 211 | MTH1520 | 3 | out | 1 | |ali|phd|phdHtm| | 336 | 3 | 1 | 3.60 | 38,60,92 | MVLVIEIIRKHLPRVLKVPA |
| 212 | MTH1641 | 3 | out | 1 | |ali|phd|phdHtm| | 148 | 5 | 8 | 5.94 | 62,99,134 | LAELMIIYKNAIIKLGVFSW |
| 213 | MTH204 | 3 | out | 1 | |ali|phd|phdHtm| | 338 | 9 | 4 | 9.36 | 32,60,111 | MVELWKERLYAFIVDFLIVT |
| 214 | MTH384 | 3 | out | 1 | |ali|phd|phdHtm| | 105 | 8 | 9 | 8.35 | 33,70,92 | MLDYHSFIMIIHVTYLSGYL |
| 215 | MTH518 | 3 | out | 1 | |ali|phd|phdHtm| | 111 | 6 | 9 | 6.43 | 48,70,108 | VVCMRFRYICHRKPERTFSF |
| 216 | MTH547 | 3 | out | 1 | |ali|phd|phdHtm| | 252 | 9 | 6 | 12.32 | 170,201,234 | MVPYLDGEDVAGVQSRVRMY |
| 217 | MTH965 | 3 | out | 1 | |ali|phd|phdHtm| | 452 | 0 | 0 | 0.38 | 131,153,192 | MGRFITITVIFKGNIVGSMM |
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