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Transmembrane helices for mettm (Methanobacterium thermoautotrophicum )
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 218 | MTH562 | 2 | in | 70 | |ali|phd|phdHtm| | 397 | 7 | 2 | -7.91 | 296,382 | MSIMDDLMEGRIKLYEIERH |
| 219 | MTH1603 | 2 | in | 27 | |ali|phd|phdHtm| | 400 | 3 | 1 | -3.72 | 175,337 | LFMRGQLDALLREERVFNPD |
| 220 | MTH1132 | 2 | in | 16 | |ali|phd|phdHtm| | 446 | 0 | 1 | -0.04 | 148,324 | VNTMPMYEDRIDLYGADGKL |
| 221 | MTH1168 | 2 | in | 16 | |ali|phd|phdHtm| | 450 | 0 | 0 | -0.12 | 152,328 | MIVRREKMAKFEDKVDLYDD |
| 222 | MTH548 | 2 | in | 16 | |ali|phd|phdHtm| | 365 | 2 | 0 | -2.47 | 240,262 | LSSWMMVPVVFLTAYSDPET |
| 223 | MTH1571 | 2 | in | 14 | |ali|phd|phdHtm| | 251 | 6 | 3 | -6.08 | 55,219 | MPERYEGMAYWEMVSRQMGL |
| 224 | MTH1313 | 2 | in | 13 | |ali|phd|phdHtm| | 135 | 6 | 2 | -6.28 | 66,104 | MSDEGPDDGKKGRYSERLRG |
| 225 | MTH1248 | 2 | in | 11 | |ali|phd|phdHtm| | 78 | 2 | 9 | -2.09 | 23,58 | MIEYVIMIIAILGAVLALVQ |
| 226 | MTH374 | 2 | in | 9 | |ali|phd|phdHtm| | 291 | 9 | 6 | -11.29 | 248,279 | MRIVAVIPAFNEEVAIGSVV |
| 227 | MTH1286 | 2 | in | 7 | |ali|phd|phdHtm| | 250 | 9 | 1 | -9.97 | 193,243 | VMPVRSILEELLRGRISLEE |
| 228 | MTH1429 | 2 | in | 7 | |ali|phd|phdHtm| | 106 | 5 | 1 | -5.86 | 31,72 | VITYKLKVMFMDVFQAIVIG |
| 229 | MTH600 | 2 | in | 7 | |ali|phd|phdHtm| | 85 | 3 | 9 | -3.19 | 32,80 | VEDKMRGEVLIPAGVILIVA |
| 230 | MTH1242 | 2 | in | 6 | |ali|phd|phdHtm| | 76 | 7 | 9 | -7.24 | 45,72 | MFAGPIIFGFILGFILGSRV |
| 231 | MTH640 | 2 | in | 6 | |ali|phd|phdHtm| | 56 | 1 | 9 | -1.92 | 28,50 | MAVAKWLLYIIGIILVLMGI |
| 232 | MTH667 | 2 | in | 6 | |ali|phd|phdHtm| | 69 | 1 | 9 | -1.52 | 32,65 | VLVIQMVAGTFTGSVIYSHA |
| 233 | MTH567 | 2 | in | 5 | |ali|phd|phdHtm| | 206 | 1 | 6 | -1.76 | 24,104 | LTMKKVLIAIAVLAIIAVSG |
| 234 | MTH785 | 2 | in | 5 | |ali|phd|phdHtm| | 644 | 9 | 0 | -17.32 | 153,176 | MKTTIKNSRTQESVSYEGNE |
| 235 | MTH1257 | 2 | in | 3 | |ali|phd|phdHtm| | 63 | 9 | 9 | -10.95 | 41,63 | MPPQRNPMETIQYVPISIIY |
| 236 | MTH1531 | 2 | in | 3 | |ali|phd|phdHtm| | 116 | 1 | 9 | -1.65 | 39,94 | MMEIEVNWKAVVSGIILTVI |
| 237 | MTH515 | 2 | in | 3 | |ali|phd|phdHtm| | 181 | 4 | 3 | -4.65 | 59,176 | MIAWVLEAARRNIWSADGSL |
| 238 | MTH671 | 2 | in | 3 | |ali|phd|phdHtm| | 226 | 3 | 6 | -3.09 | 39,181 | MVAVPGSEILSGALHVVSQS |
| 239 | MTH693 | 2 | in | 3 | |ali|phd|phdHtm| | 146 | 9 | 9 | -15.15 | 33,66 | VVGLMGPESWIIIAAICLIG |
| 240 | MTH1026 | 2 | in | 2 | |ali|phd|phdHtm| | 223 | 2 | 1 | -2.72 | 35,160 | VLPKRASFLVSVATIPLLFG |
| 241 | MTH1245 | 2 | in | 2 | |ali|phd|phdHtm| | 110 | 2 | 9 | -2.53 | 61,103 | MNFYDEIINRIRKVTGERGD |
| 242 | MTH387 | 2 | in | 2 | |ali|phd|phdHtm| | 92 | 2 | 9 | -2.20 | 42,74 | MFMNPMDLLNITNVGVFVIF |
| 243 | MTH388 | 2 | in | 2 | |ali|phd|phdHtm| | 89 | 1 | 9 | -1.52 | 31,72 | VRNLLETQIWFYAGAALVVI |
| 244 | MTH642 | 2 | in | 2 | |ali|phd|phdHtm| | 65 | 2 | 9 | -2.05 | 34,58 | MEDMVMERFEQLGVFHLAAG |
| 245 | MTH712 | 2 | in | 2 | |ali|phd|phdHtm| | 83 | 7 | 9 | -7.06 | 42,71 | MQEGAGMAEDFGRYWVAGLI |
| 246 | MTH95 | 2 | in | 2 | |ali|phd|phdHtm| | 151 | 4 | 8 | -4.95 | 59,132 | MKDKMFILTLLAVFAISAAV |
| 247 | MTH1028 | 2 | in | 1 | |ali|phd|phdHtm| | 441 | 3 | 0 | -4.00 | 138,282 | MLDKIKGNDRDKKNNPPDLR |
| 248 | MTH1029 | 2 | in | 1 | |ali|phd|phdHtm| | 312 | 9 | 3 | -23.61 | 25,306 | VGMLMKKLVYTAIMAIFIIS |
| 249 | MTH1038 | 2 | in | 1 | |ali|phd|phdHtm| | 289 | 1 | 1 | -1.50 | 25,288 | VVIMRQILPLILIAFLVAAP |
| 250 | MTH1102 | 2 | in | 1 | |ali|phd|phdHtm| | 86 | 0 | 9 | -0.37 | 39,86 | MRLSDQNKVSLVAGLCLVGL |
| 251 | MTH1124 | 2 | in | 1 | |ali|phd|phdHtm| | 348 | 9 | 3 | -11.97 | 33,60 | MDPERDALRIALYYALFSIL |
| 252 | MTH145 | 2 | in | 1 | |ali|phd|phdHtm| | 252 | 9 | 6 | -10.36 | 29,57 | MKTKINWRVKLALLLVLVSA |
| 253 | MTH1725 | 2 | in | 1 | |ali|phd|phdHtm| | 92 | 9 | 9 | -31.25 | 38,64 | MEDDEYKRARKRVEDLKGFY |
| 254 | MTH282 | 2 | in | 1 | |ali|phd|phdHtm| | 308 | 4 | 0 | -4.65 | 38,60 | LRVVSMEGEDTCAGCLFLIV |
| 255 | MTH349 | 2 | in | 1 | |ali|phd|phdHtm| | 196 | 9 | 6 | -10.00 | 168,191 | MDLIKIVSCLEEGNIIHCGG |
| 256 | MTH389 | 2 | in | 1 | |ali|phd|phdHtm| | 159 | 9 | 6 | -22.85 | 36,151 | MSLGRILNELANPKRIPRLF |
| 257 | MTH436 | 2 | in | 1 | |ali|phd|phdHtm| | 70 | 9 | 7 | -16.89 | 42,69 | MEDEVEIKRKPRRPSDGGRL |
| 258 | MTH489 | 2 | in | 1 | |ali|phd|phdHtm| | 109 | 8 | 9 | -8.77 | 62,93 | LMYVKWIVMIPPILSLYFSA |
| 259 | MTH60 | 2 | in | 1 | |ali|phd|phdHtm| | 176 | 8 | 3 | -8.33 | 29,59 | VINMREKLMGVIPLMVALVF |
| 260 | MTH636 | 2 | in | 1 | |ali|phd|phdHtm| | 106 | 1 | 9 | -1.94 | 61,102 | MNVLRAVIKCTENFISHQDK |
| 261 | MTH69 | 2 | in | 1 | |ali|phd|phdHtm| | 85 | 9 | 9 | -14.29 | 41,80 | MIERSEKGERKFDILFMVTF |
| 262 | MTH698 | 2 | in | 1 | |ali|phd|phdHtm| | 196 | 7 | 4 | -7.61 | 39,61 | MSCSLFFSCSSSLRYAGAPW |
| 263 | MTH71 | 2 | in | 1 | |ali|phd|phdHtm| | 88 | 7 | 9 | -7.78 | 57,82 | LEIISYGLVGQGLIRVNMAA |
| 264 | MTH726 | 2 | in | 1 | |ali|phd|phdHtm| | 204 | 9 | 6 | -18.87 | 46,84 | MFGRDRLHPGERILYETRPR |
| 265 | MTH733 | 2 | in | 1 | |ali|phd|phdHtm| | 147 | 9 | 8 | -17.14 | 28,61 | MLIKIRRDTLVILLLAFILI |
| 266 | MTH823 | 2 | in | 1 | |ali|phd|phdHtm| | 677 | 9 | 2 | -9.32 | 59,82 | LTYKSLPVAEKIQSYWNRRA |
| 267 | MTH977 | 2 | in | 1 | |ali|phd|phdHtm| | 394 | 9 | 2 | -24.15 | 26,337 | LKDKHIVLPLLVLLAFAAGI |
| 268 | MTH1780 | 2 | out | 18 | |ali|phd|phdHtm| | 297 | 9 | 0 | 12.75 | 64,101 | MAFSFTLTVNFSILPYYEGQ |
| 269 | MTH1392 | 2 | out | 6 | |ali|phd|phdHtm| | 564 | 9 | 2 | 16.34 | 294,337 | MSWLILMVVFFLCAFRAVKD |
| 270 | MTH559 | 2 | out | 5 | |ali|phd|phdHtm| | 232 | 9 | 2 | 15.96 | 33,59 | MTMISEFYQIFGQLVFLAGV |
| 271 | MTH860 | 2 | out | 5 | |ali|phd|phdHtm| | 334 | 1 | 2 | 1.56 | 162,315 | MKYGMFNELMEQPESLRRTL |
| 272 | MTH1512 | 2 | out | 4 | |ali|phd|phdHtm| | 344 | 5 | 0 | 5.06 | 127,220 | VSTMKVAVYGAGNQKLYVDQ |
| 273 | MTH1249 | 2 | out | 3 | |ali|phd|phdHtm| | 87 | 9 | 9 | 13.79 | 26,73 | MYLIIMKSAVLFISSILVIL |
| 274 | MTH1519 | 2 | out | 3 | |ali|phd|phdHtm| | 91 | 9 | 2 | 40.47 | 18,87 | MRWLALLMLMIFVAGSSIGT |
| 275 | MTH110 | 2 | out | 2 | |ali|phd|phdHtm| | 82 | 7 | 0 | 7.80 | 23,71 | VDWQWLSSQDISNFIICEVT |
| 276 | MTH394 | 2 | out | 2 | |ali|phd|phdHtm| | 83 | 4 | 9 | 4.75 | 41,81 | MERDLTLLTALVAGGVIAVS |
| 277 | MTH504 | 2 | out | 2 | |ali|phd|phdHtm| | 347 | 4 | 0 | 4.02 | 132,223 | VKRVIAMKVTVYGAGNQKLY |
| 278 | MTH617 | 2 | out | 2 | |ali|phd|phdHtm| | 96 | 3 | 9 | 3.68 | 67,96 | VCQVVQMPKRKMRTRMDPER |
| 279 | MTH1277 | 2 | out | 1 | |ali|phd|phdHtm| | 137 | 9 | 9 | 15.71 | 106,134 | LMLNEEVEMVYCPRCGERNR |
| 280 | MTH1302 | 2 | out | 1 | |ali|phd|phdHtm| | 237 | 3 | 0 | 3.16 | 43,98 | MMIKTETECCTIYSEDVEDA |
| 281 | MTH138 | 2 | out | 1 | |ali|phd|phdHtm| | 384 | 1 | 2 | 1.00 | 119,301 | LRKQGVHMRICIVTEYFPGG |
| 282 | MTH1901 | 2 | out | 1 | |ali|phd|phdHtm| | 465 | 9 | 3 | 40.00 | 20,51 | MIYLIITIAGIVMIFAGLYF |
| 283 | MTH293 | 2 | out | 1 | |ali|phd|phdHtm| | 177 | 9 | 1 | 12.72 | 50,72 | LIGMNSIDIYMTLEERISSA |
| 284 | MTH366 | 2 | unk | 1 | |ali|phd|phdHtm| | 49 | 0 | 7 | 0.00 | 27,49 | VIIGSIVHLIMLLAVSAFMN |
| 285 | MTH768 | 2 | out | 1 | |ali|phd|phdHtm| | 84 | 9 | 9 | 15.38 | 43,74 | MELIWFYIALFLAISDEIHT |
| 286 | MTH89 | 2 | out | 1 | |ali|phd|phdHtm| | 59 | 9 | 9 | 17.11 | 35,57 | LFLMLAWLPGGWATHLKRHI |
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