--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Methanobacterium thermoautotrophicum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 21 MTH748 1 in 25 374 7 2 -7.85 360 LILCGDSVAGNSTGEMFRVT IVLADHMIRAGFIHPTYIGN 22 MTH1036 1 in 19 365 0 2 -0.18 310 MKFYEYSAKEIFRAEGISTP IPFETSLERAAEKAVEIAKN 23 MTH627 1 in 13 189 4 4 -4.93 46 MHFPIKHPKTFIMKGPISLL YTDMTGKHSTNSNSVEIPLK 24 MTH1142 1 in 10 347 5 2 -5.76 271 VIDMKLAILGAGCYRTHAAS NFGASADILPTVFEILEKRK 25 MTH1915 1 in 9 337 1 2 -1.20 109 VIVIDGSEGEGGGAVVRVST ITGRRFRVEGERGGPATIEV 26 MTH1666 1 in 8 383 2 1 -2.41 328 MRRQRRSEDDREYLKIVQIK ENFIRVSTAEIADFCQDHRK 27 MTH1216 1 in 7 386 3 2 -3.52 90 MEIILCVTGSVAAIEAVKLA LASIIIDEVIRKVGDSLDQL 28 MTH1035 1 in 6 189 2 5 -2.50 150 MIEVRKEIRIAGFGGQGVIL TEEKNLMAFQAGRELIMEGS 29 MTH1728 1 in 5 278 9 3 -12.03 31 VMDMELKPKNILIIIIIIAL GQAIVRSQKVVPAIANVSDD 30 MTH705 1 in 5 477 2 1 -2.74 431 VTKKVIRKPDSLHDVFERKG MNLRILEAGAEWARENIEGE 31 MTH1874 1 in 4 281 4 3 -4.00 143 DIPHTHINESYNTHASEMLY EADYLVEIAGAPRAVVERMI 32 MTH719 1 in 4 574 9 1 -18.87 27 LVKIMSRISFLLLVLAVAFL MYSKIIKFYGTNKRLPNYVT 33 MTH131 1 in 3 74 9 9 -29.94 23 MDKRHILMLLAVIIISVAPL QPLWEPPSGEIESLLFACRQ 34 MTH1408 1 in 3 329 4 3 -4.92 64 MIVTILTLTERARRLAGEMR RKTKSSGVTAALAVSGTPKA 35 MTH425 1 in 3 119 9 8 -15.65 35 LRDLLSDRRGFAFSLDVLLA SPAKIAGINTTNMGELVGPE 36 MTH114 1 in 2 262 9 4 -20.04 257 MAFHVMIIPSMNCPSDCSYC WATPSQLTPTVIYTHAIASL 37 MTH1330 1 in 2 319 9 2 -25.93 25 MGVSKVRGLYILLLVVLLLA CKTYGDRYMDWYRRVGYRYA 38 MTH1883 1 in 2 306 9 3 -10.60 110 MIMVQGEVSGKKYTEPFSKG IIKSLTKTTVKGGEKGAEKT 39 MTH1646 1 in 1 237 2 3 -2.00 121 MFIELVMIMKALFTVTGRGM NSGMEANITVLDHPSGMSIS 40 MTH1815 1 in 1 346 4 2 -4.00 202 MDASEAYRIFKGRPELRDAL AGASVMEVRTLRQLAEVIEG 41 MTH290 1 in 1 169 9 5 -21.00 44 MSSDVDDGKTGRSGGWWSRR VVFFGITARGNLLTPSGKFC 42 MTH291 1 in 1 148 9 6 -26.00 43 MSSDDDGKTGRLRGWWSKRS IIWEEHPNILTVGLQTQAHV 43 MTH357 1 in 1 735 9 1 -16.00 43 MFIYKGLFKSLHGVFSPSGG LGVIKNWKSASIKGYYAELP 44 MTH376 1 in 1 395 6 3 -6.00 136 MRILVVQESDWIERNPHQQH DWESITERFEETLRELVEKD 45 MTH805 1 in 1 289 9 3 -9.86 232 VMVVKKTVRSPGSATVINAI ENLEGDVLVTSVDNEGTRVL 46 MTH84 1 in 1 200 3 5 -3.33 48 LNWSGWWKFIGVAGVSTAEA IEACILGFKNYLEKKLREAG 47 MTH1740 1 out 56 261 1 4 1.60 142 MIEIRFHGRGGQGAVTAAEI KGCGICAEKCPVKAIKMERE 48 MTH194 1 out 48 499 3 1 3.76 412 MPFKVERKEEVCKRNFDRPG TVEASALTGVKLAGMESPAR 49 MTH1826 1 out 45 367 6 2 6.00 116 VASKVYFADLRARSADENKG YQLVYAEEIGLGSRKYHLVR 50 MTH1813 1 out 39 328 9 2 12.00 211 MIESKYTNKGSDFSETELEE DLDVIRGSEIFKISVKPSEL 51 MTH253 1 out 25 406 2 2 2.68 151 MDGESVIRCISCGREYDLEE PVEVEPDINQLRSIIRGTGS 52 MTH1003 1 out 15 409 4 2 4.40 322 LMGVEFLEIIDLDDARRITG PKNVEIINEGEEVEVVLFEN 53 MTH872 1 out 13 283 9 2 13.52 205 MMRIGIIARFDVAEAVEIAE KDFYRKVREKLIEGGIDSIK 54 MTH1456 1 out 10 218 1 3 1.48 111 MDPQGNATTGFGINKSELES PESTGTEAYMKLAAEILEME 55 MTH1916 1 out 10 261 3 3 3.32 102 MVEDYDPCEVEVDTEYIGHE LILELDDGTLRKVISGECIH 56 MTH1645 1 out 8 561 9 1 16.29 554 VINMNIGPYNNRPDMGRLRE AVSFLIALALIVSIIKSRRL 57 MTH853 1 out 7 391 9 2 12.07 384 MVLVVGSGAGGATLARELAI PPILTIMALARRLARHIVSV 58 MTH1156 1 out 6 310 7 3 7.77 289 MFRFDKEQIVLDIAGTKIGG SEAAKDIGTEPVEDHPFFKL 59 MTH1403 1 out 6 351 4 2 4.68 122 MIRIIGIGPARDDITIRALR DDLMDKKRELLKLRRECLMR 60 MTH1576 1 out 5 424 9 2 10.72 324 VTQMEEARKGNITPEMEEVA DSEMCSMCGEYCALRILRED 61 MTH1320 1 out 4 196 3 4 3.20 82 VIEMLDKLKESLRNSPVIKK KVDVIDGRVKVEDIPAGGPH 62 MTH1469 1 out 4 73 9 9 37.26 71 MRERQVTSMRNIIRGRVTGL LKLGTMIYAGFKAVAVTVLK 63 MTH1918 1 out 3 211 0 3 0.32 79 LRGNMIRRKRHLEMLLEKVP TYSFHRMEVASVGVVILRVV 64 MTH1105 1 out 2 368 6 2 6.68 175 VFQLDKIKIAIVGVGNCASS QYTDDVAARMVDEFIAGERE 65 MTH116 1 out 2 247 6 3 6.00 177 MNEIERNRYFLKDSIRKRVD EVLGVDGVDEFAIYLAPVGK 66 MTH1497 1 out 2 490 2 1 2.68 382 VSPMRIGLVCIRGSVPAFEN AKKPEFRGYMGPEEIKKVFS 67 MTH1525 1 out 2 462 6 1 6.64 216 MKGSVRGWIMDIEGFVRRNM DAARRAIEKKDMVVRMISRE 68 MTH1782 1 out 2 94 0 9 0.74 26 MMDRMNIAGAVLLIVLVAAF RVYTVETQRNFTGPVPGLNM 69 MTH493 1 out 2 187 7 4 7.67 58 LLSRVQNIRLFNLQTGETDS PAIPAMAGIMRGSECYHIPR 70 MTH1279 1 out 1 234 8 3 8.00 168 MEIKRIAERIRDITGSPVWL PELDPFIDRYVEGCLKNLKL 71 MTH1301 1 out 1 147 4 5 4.00 23 LMINSKVLASVAIVLIIGAV VGEIYIDPMTGKNLGGAGGA 72 MTH1346 1 out 1 933 9 1 16.57 926 VKWMRRLFMVSVLFLLAMLT VGVLVAAGLVAFGFLRGGAG 73 MTH1475 1 out 1 96 1 9 1.97 50 VMAASIDINTIITYTKINLY FANEFPGTGQHRQTQKPPPR 74 MTH1762 1 out 1 647 8 1 8.00 566 LMNSRDSVGPILTEVGGIGE ERIVYGRILEKFQKTDKAEE 75 MTH1828 1 out 1 359 8 2 8.00 247 VGEILEIDGVEGVIITESSG AMDELGITGTIHPELRKIWE 76 MTH1914 1 out 1 377 6 2 6.00 327 MLEDPVNEVKRREHALRIIG AIKLVSGFINDDEKMRRLIL 77 MTH206 1 out 1 79 8 9 8.06 43 LPDCHYFTSIIHTRISKTEF AVPLPLFKWIAATVINFPGH 78 MTH274 1 out 1 253 1 3 1.39 207 LRGLIIIMDYKVNSADDNNI QRLIDLYGCRPRIIMEKLGS 79 MTH462 1 out 1 265 0 3 0.00 135 MSDIDDETADVLVELVNEYE ETASYYISKARDHMFEIYQI 80 MTH526 1 out 1 228 0 3 0.00 157 MVDVCGVNGYDEISGKLKDL LIVGLNGENIGCVLNALEAI 81 MTH539 1 out 1 218 5 4 5.94 51 METFIYHDDVTIDSVSLVTL YNKIYHPTSRKPGMFVVKSS 82 MTH564 1 out 1 246 9 2 13.53 229 VIVLKITSIGADISDNDTSC NGNLIDLAVPFEERTRILRV 83 MTH674 1 out 1 966 9 0 20.57 959 MGRQYFMVFMVLLVAVALTG VGVLVAAGLVAFGFLRGGAG 84 MTH77 1 out 1 135 1 6 1.35 70 VEGFIGLNMAAYATIIAYTG HYIEIPKNPDGSLRWEDAAY 85 MTH98 1 out 1 61 9 9 16.01 52 FYESSHKLEISPGIIAVIFI VCVLTIISIFHGNLHQYREE