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Transmembrane helices for mettm (Methanobacterium thermoautotrophicum )-- Low Reliability Report

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN

21 MTH748 1 in 25 |ali|phd|phdHtm| 374 7 2 -7.85 360 LILCGDSVAGNSTGEMFRVT

22 MTH1036 1 in 19 |ali|phd|phdHtm| 365 0 2 -0.18 310 MKFYEYSAKEIFRAEGISTP

23 MTH627 1 in 13 |ali|phd|phdHtm| 189 4 4 -4.93 46 MHFPIKHPKTFIMKGPISLL

24 MTH1142 1 in 10 |ali|phd|phdHtm| 347 5 2 -5.76 271 VIDMKLAILGAGCYRTHAAS

25 MTH1915 1 in 9 |ali|phd|phdHtm| 337 1 2 -1.20 109 VIVIDGSEGEGGGAVVRVST

26 MTH1666 1 in 8 |ali|phd|phdHtm| 383 2 1 -2.41 328 MRRQRRSEDDREYLKIVQIK

27 MTH1216 1 in 7 |ali|phd|phdHtm| 386 3 2 -3.52 90 MEIILCVTGSVAAIEAVKLA

28 MTH1035 1 in 6 |ali|phd|phdHtm| 189 2 5 -2.50 150 MIEVRKEIRIAGFGGQGVIL

29 MTH1728 1 in 5 |ali|phd|phdHtm| 278 9 3 -12.03 31 VMDMELKPKNILIIIIIIAL

30 MTH705 1 in 5 |ali|phd|phdHtm| 477 2 1 -2.74 431 VTKKVIRKPDSLHDVFERKG

31 MTH1874 1 in 4 |ali|phd|phdHtm| 281 4 3 -4.00 143 DIPHTHINESYNTHASEMLY

32 MTH719 1 in 4 |ali|phd|phdHtm| 574 9 1 -18.87 27 LVKIMSRISFLLLVLAVAFL

33 MTH131 1 in 3 |ali|phd|phdHtm| 74 9 9 -29.94 23 MDKRHILMLLAVIIISVAPL

34 MTH1408 1 in 3 |ali|phd|phdHtm| 329 4 3 -4.92 64 MIVTILTLTERARRLAGEMR

35 MTH425 1 in 3 |ali|phd|phdHtm| 119 9 8 -15.65 35 LRDLLSDRRGFAFSLDVLLA

36 MTH114 1 in 2 |ali|phd|phdHtm| 262 9 4 -20.04 257 MAFHVMIIPSMNCPSDCSYC

37 MTH1330 1 in 2 |ali|phd|phdHtm| 319 9 2 -25.93 25 MGVSKVRGLYILLLVVLLLA

38 MTH1883 1 in 2 |ali|phd|phdHtm| 306 9 3 -10.60 110 MIMVQGEVSGKKYTEPFSKG

39 MTH1646 1 in 1 |ali|phd|phdHtm| 237 2 3 -2.00 121 MFIELVMIMKALFTVTGRGM

40 MTH1815 1 in 1 |ali|phd|phdHtm| 346 4 2 -4.00 202 MDASEAYRIFKGRPELRDAL

41 MTH290 1 in 1 |ali|phd|phdHtm| 169 9 5 -21.00 44 MSSDVDDGKTGRSGGWWSRR

42 MTH291 1 in 1 |ali|phd|phdHtm| 148 9 6 -26.00 43 MSSDDDGKTGRLRGWWSKRS

43 MTH357 1 in 1 |ali|phd|phdHtm| 735 9 1 -16.00 43 MFIYKGLFKSLHGVFSPSGG

44 MTH376 1 in 1 |ali|phd|phdHtm| 395 6 3 -6.00 136 MRILVVQESDWIERNPHQQH

45 MTH805 1 in 1 |ali|phd|phdHtm| 289 9 3 -9.86 232 VMVVKKTVRSPGSATVINAI

46 MTH84 1 in 1 |ali|phd|phdHtm| 200 3 5 -3.33 48 LNWSGWWKFIGVAGVSTAEA

47 MTH1740 1 out 56 |ali|phd|phdHtm| 261 1 4 1.60 142 MIEIRFHGRGGQGAVTAAEI

48 MTH194 1 out 48 |ali|phd|phdHtm| 499 3 1 3.76 412 MPFKVERKEEVCKRNFDRPG

49 MTH1826 1 out 45 |ali|phd|phdHtm| 367 6 2 6.00 116 VASKVYFADLRARSADENKG

50 MTH1813 1 out 39 |ali|phd|phdHtm| 328 9 2 12.00 211 MIESKYTNKGSDFSETELEE

51 MTH253 1 out 25 |ali|phd|phdHtm| 406 2 2 2.68 151 MDGESVIRCISCGREYDLEE

52 MTH1003 1 out 15 |ali|phd|phdHtm| 409 4 2 4.40 322 LMGVEFLEIIDLDDARRITG

53 MTH872 1 out 13 |ali|phd|phdHtm| 283 9 2 13.52 205 MMRIGIIARFDVAEAVEIAE

54 MTH1456 1 out 10 |ali|phd|phdHtm| 218 1 3 1.48 111 MDPQGNATTGFGINKSELES

55 MTH1916 1 out 10 |ali|phd|phdHtm| 261 3 3 3.32 102 MVEDYDPCEVEVDTEYIGHE

56 MTH1645 1 out 8 |ali|phd|phdHtm| 561 9 1 16.29 554 VINMNIGPYNNRPDMGRLRE

57 MTH853 1 out 7 |ali|phd|phdHtm| 391 9 2 12.07 384 MVLVVGSGAGGATLARELAI

58 MTH1156 1 out 6 |ali|phd|phdHtm| 310 7 3 7.77 289 MFRFDKEQIVLDIAGTKIGG

59 MTH1403 1 out 6 |ali|phd|phdHtm| 351 4 2 4.68 122 MIRIIGIGPARDDITIRALR

60 MTH1576 1 out 5 |ali|phd|phdHtm| 424 9 2 10.72 324 VTQMEEARKGNITPEMEEVA

61 MTH1320 1 out 4 |ali|phd|phdHtm| 196 3 4 3.20 82 VIEMLDKLKESLRNSPVIKK

62 MTH1469 1 out 4 |ali|phd|phdHtm| 73 9 9 37.26 71 MRERQVTSMRNIIRGRVTGL

63 MTH1918 1 out 3 |ali|phd|phdHtm| 211 0 3 0.32 79 LRGNMIRRKRHLEMLLEKVP

64 MTH1105 1 out 2 |ali|phd|phdHtm| 368 6 2 6.68 175 VFQLDKIKIAIVGVGNCASS

65 MTH116 1 out 2 |ali|phd|phdHtm| 247 6 3 6.00 177 MNEIERNRYFLKDSIRKRVD

66 MTH1497 1 out 2 |ali|phd|phdHtm| 490 2 1 2.68 382 VSPMRIGLVCIRGSVPAFEN

67 MTH1525 1 out 2 |ali|phd|phdHtm| 462 6 1 6.64 216 MKGSVRGWIMDIEGFVRRNM

68 MTH1782 1 out 2 |ali|phd|phdHtm| 94 0 9 0.74 26 MMDRMNIAGAVLLIVLVAAF

69 MTH493 1 out 2 |ali|phd|phdHtm| 187 7 4 7.67 58 LLSRVQNIRLFNLQTGETDS

70 MTH1279 1 out 1 |ali|phd|phdHtm| 234 8 3 8.00 168 MEIKRIAERIRDITGSPVWL

71 MTH1301 1 out 1 |ali|phd|phdHtm| 147 4 5 4.00 23 LMINSKVLASVAIVLIIGAV

72 MTH1346 1 out 1 |ali|phd|phdHtm| 933 9 1 16.57 926 VKWMRRLFMVSVLFLLAMLT

73 MTH1475 1 out 1 |ali|phd|phdHtm| 96 1 9 1.97 50 VMAASIDINTIITYTKINLY

74 MTH1762 1 out 1 |ali|phd|phdHtm| 647 8 1 8.00 566 LMNSRDSVGPILTEVGGIGE

75 MTH1828 1 out 1 |ali|phd|phdHtm| 359 8 2 8.00 247 VGEILEIDGVEGVIITESSG

76 MTH1914 1 out 1 |ali|phd|phdHtm| 377 6 2 6.00 327 MLEDPVNEVKRREHALRIIG

77 MTH206 1 out 1 |ali|phd|phdHtm| 79 8 9 8.06 43 LPDCHYFTSIIHTRISKTEF

78 MTH274 1 out 1 |ali|phd|phdHtm| 253 1 3 1.39 207 LRGLIIIMDYKVNSADDNNI

79 MTH462 1 out 1 |ali|phd|phdHtm| 265 0 3 0.00 135 MSDIDDETADVLVELVNEYE

80 MTH526 1 out 1 |ali|phd|phdHtm| 228 0 3 0.00 157 MVDVCGVNGYDEISGKLKDL

81 MTH539 1 out 1 |ali|phd|phdHtm| 218 5 4 5.94 51 METFIYHDDVTIDSVSLVTL

82 MTH564 1 out 1 |ali|phd|phdHtm| 246 9 2 13.53 229 VIVLKITSIGADISDNDTSC

83 MTH674 1 out 1 |ali|phd|phdHtm| 966 9 0 20.57 959 MGRQYFMVFMVLLVAVALTG

84 MTH77 1 out 1 |ali|phd|phdHtm| 135 1 6 1.35 70 VEGFIGLNMAAYATIIAYTG

85 MTH98 1 out 1 |ali|phd|phdHtm| 61 9 9 16.01 52 FYESSHKLEISPGIIAVIFI

num	id	nhtm	top	nali	ali\|phd\|phdHtm	len1	riTop	riMod	topD	htmCN	seqN
21	MTH748	1	in	25	\|ali\|phd\|phdHtm\|	374	7	2	-7.85	360	LILCGDSVAGNSTGEMFRVT
22	MTH1036	1	in	19	\|ali\|phd\|phdHtm\|	365	0	2	-0.18	310	MKFYEYSAKEIFRAEGISTP
23	MTH627	1	in	13	\|ali\|phd\|phdHtm\|	189	4	4	-4.93	46	MHFPIKHPKTFIMKGPISLL
24	MTH1142	1	in	10	\|ali\|phd\|phdHtm\|	347	5	2	-5.76	271	VIDMKLAILGAGCYRTHAAS
25	MTH1915	1	in	9	\|ali\|phd\|phdHtm\|	337	1	2	-1.20	109	VIVIDGSEGEGGGAVVRVST
26	MTH1666	1	in	8	\|ali\|phd\|phdHtm\|	383	2	1	-2.41	328	MRRQRRSEDDREYLKIVQIK
27	MTH1216	1	in	7	\|ali\|phd\|phdHtm\|	386	3	2	-3.52	90	MEIILCVTGSVAAIEAVKLA
28	MTH1035	1	in	6	\|ali\|phd\|phdHtm\|	189	2	5	-2.50	150	MIEVRKEIRIAGFGGQGVIL
29	MTH1728	1	in	5	\|ali\|phd\|phdHtm\|	278	9	3	-12.03	31	VMDMELKPKNILIIIIIIAL
30	MTH705	1	in	5	\|ali\|phd\|phdHtm\|	477	2	1	-2.74	431	VTKKVIRKPDSLHDVFERKG
31	MTH1874	1	in	4	\|ali\|phd\|phdHtm\|	281	4	3	-4.00	143	DIPHTHINESYNTHASEMLY
32	MTH719	1	in	4	\|ali\|phd\|phdHtm\|	574	9	1	-18.87	27	LVKIMSRISFLLLVLAVAFL
33	MTH131	1	in	3	\|ali\|phd\|phdHtm\|	74	9	9	-29.94	23	MDKRHILMLLAVIIISVAPL
34	MTH1408	1	in	3	\|ali\|phd\|phdHtm\|	329	4	3	-4.92	64	MIVTILTLTERARRLAGEMR
35	MTH425	1	in	3	\|ali\|phd\|phdHtm\|	119	9	8	-15.65	35	LRDLLSDRRGFAFSLDVLLA
36	MTH114	1	in	2	\|ali\|phd\|phdHtm\|	262	9	4	-20.04	257	MAFHVMIIPSMNCPSDCSYC
37	MTH1330	1	in	2	\|ali\|phd\|phdHtm\|	319	9	2	-25.93	25	MGVSKVRGLYILLLVVLLLA
38	MTH1883	1	in	2	\|ali\|phd\|phdHtm\|	306	9	3	-10.60	110	MIMVQGEVSGKKYTEPFSKG
39	MTH1646	1	in	1	\|ali\|phd\|phdHtm\|	237	2	3	-2.00	121	MFIELVMIMKALFTVTGRGM
40	MTH1815	1	in	1	\|ali\|phd\|phdHtm\|	346	4	2	-4.00	202	MDASEAYRIFKGRPELRDAL
41	MTH290	1	in	1	\|ali\|phd\|phdHtm\|	169	9	5	-21.00	44	MSSDVDDGKTGRSGGWWSRR
42	MTH291	1	in	1	\|ali\|phd\|phdHtm\|	148	9	6	-26.00	43	MSSDDDGKTGRLRGWWSKRS
43	MTH357	1	in	1	\|ali\|phd\|phdHtm\|	735	9	1	-16.00	43	MFIYKGLFKSLHGVFSPSGG
44	MTH376	1	in	1	\|ali\|phd\|phdHtm\|	395	6	3	-6.00	136	MRILVVQESDWIERNPHQQH
45	MTH805	1	in	1	\|ali\|phd\|phdHtm\|	289	9	3	-9.86	232	VMVVKKTVRSPGSATVINAI
46	MTH84	1	in	1	\|ali\|phd\|phdHtm\|	200	3	5	-3.33	48	LNWSGWWKFIGVAGVSTAEA
47	MTH1740	1	out	56	\|ali\|phd\|phdHtm\|	261	1	4	1.60	142	MIEIRFHGRGGQGAVTAAEI
48	MTH194	1	out	48	\|ali\|phd\|phdHtm\|	499	3	1	3.76	412	MPFKVERKEEVCKRNFDRPG
49	MTH1826	1	out	45	\|ali\|phd\|phdHtm\|	367	6	2	6.00	116	VASKVYFADLRARSADENKG
50	MTH1813	1	out	39	\|ali\|phd\|phdHtm\|	328	9	2	12.00	211	MIESKYTNKGSDFSETELEE
51	MTH253	1	out	25	\|ali\|phd\|phdHtm\|	406	2	2	2.68	151	MDGESVIRCISCGREYDLEE
52	MTH1003	1	out	15	\|ali\|phd\|phdHtm\|	409	4	2	4.40	322	LMGVEFLEIIDLDDARRITG
53	MTH872	1	out	13	\|ali\|phd\|phdHtm\|	283	9	2	13.52	205	MMRIGIIARFDVAEAVEIAE
54	MTH1456	1	out	10	\|ali\|phd\|phdHtm\|	218	1	3	1.48	111	MDPQGNATTGFGINKSELES
55	MTH1916	1	out	10	\|ali\|phd\|phdHtm\|	261	3	3	3.32	102	MVEDYDPCEVEVDTEYIGHE
56	MTH1645	1	out	8	\|ali\|phd\|phdHtm\|	561	9	1	16.29	554	VINMNIGPYNNRPDMGRLRE
57	MTH853	1	out	7	\|ali\|phd\|phdHtm\|	391	9	2	12.07	384	MVLVVGSGAGGATLARELAI
58	MTH1156	1	out	6	\|ali\|phd\|phdHtm\|	310	7	3	7.77	289	MFRFDKEQIVLDIAGTKIGG
59	MTH1403	1	out	6	\|ali\|phd\|phdHtm\|	351	4	2	4.68	122	MIRIIGIGPARDDITIRALR
60	MTH1576	1	out	5	\|ali\|phd\|phdHtm\|	424	9	2	10.72	324	VTQMEEARKGNITPEMEEVA
61	MTH1320	1	out	4	\|ali\|phd\|phdHtm\|	196	3	4	3.20	82	VIEMLDKLKESLRNSPVIKK
62	MTH1469	1	out	4	\|ali\|phd\|phdHtm\|	73	9	9	37.26	71	MRERQVTSMRNIIRGRVTGL
63	MTH1918	1	out	3	\|ali\|phd\|phdHtm\|	211	0	3	0.32	79	LRGNMIRRKRHLEMLLEKVP
64	MTH1105	1	out	2	\|ali\|phd\|phdHtm\|	368	6	2	6.68	175	VFQLDKIKIAIVGVGNCASS
65	MTH116	1	out	2	\|ali\|phd\|phdHtm\|	247	6	3	6.00	177	MNEIERNRYFLKDSIRKRVD
66	MTH1497	1	out	2	\|ali\|phd\|phdHtm\|	490	2	1	2.68	382	VSPMRIGLVCIRGSVPAFEN
67	MTH1525	1	out	2	\|ali\|phd\|phdHtm\|	462	6	1	6.64	216	MKGSVRGWIMDIEGFVRRNM
68	MTH1782	1	out	2	\|ali\|phd\|phdHtm\|	94	0	9	0.74	26	MMDRMNIAGAVLLIVLVAAF
69	MTH493	1	out	2	\|ali\|phd\|phdHtm\|	187	7	4	7.67	58	LLSRVQNIRLFNLQTGETDS
70	MTH1279	1	out	1	\|ali\|phd\|phdHtm\|	234	8	3	8.00	168	MEIKRIAERIRDITGSPVWL
71	MTH1301	1	out	1	\|ali\|phd\|phdHtm\|	147	4	5	4.00	23	LMINSKVLASVAIVLIIGAV
72	MTH1346	1	out	1	\|ali\|phd\|phdHtm\|	933	9	1	16.57	926	VKWMRRLFMVSVLFLLAMLT
73	MTH1475	1	out	1	\|ali\|phd\|phdHtm\|	96	1	9	1.97	50	VMAASIDINTIITYTKINLY
74	MTH1762	1	out	1	\|ali\|phd\|phdHtm\|	647	8	1	8.00	566	LMNSRDSVGPILTEVGGIGE
75	MTH1828	1	out	1	\|ali\|phd\|phdHtm\|	359	8	2	8.00	247	VGEILEIDGVEGVIITESSG
76	MTH1914	1	out	1	\|ali\|phd\|phdHtm\|	377	6	2	6.00	327	MLEDPVNEVKRREHALRIIG
77	MTH206	1	out	1	\|ali\|phd\|phdHtm\|	79	8	9	8.06	43	LPDCHYFTSIIHTRISKTEF
78	MTH274	1	out	1	\|ali\|phd\|phdHtm\|	253	1	3	1.39	207	LRGLIIIMDYKVNSADDNNI
79	MTH462	1	out	1	\|ali\|phd\|phdHtm\|	265	0	3	0.00	135	MSDIDDETADVLVELVNEYE
80	MTH526	1	out	1	\|ali\|phd\|phdHtm\|	228	0	3	0.00	157	MVDVCGVNGYDEISGKLKDL
81	MTH539	1	out	1	\|ali\|phd\|phdHtm\|	218	5	4	5.94	51	METFIYHDDVTIDSVSLVTL
82	MTH564	1	out	1	\|ali\|phd\|phdHtm\|	246	9	2	13.53	229	VIVLKITSIGADISDNDTSC
83	MTH674	1	out	1	\|ali\|phd\|phdHtm\|	966	9	0	20.57	959	MGRQYFMVFMVLLVAVALTG
84	MTH77	1	out	1	\|ali\|phd\|phdHtm\|	135	1	6	1.35	70	VEGFIGLNMAAYATIIAYTG
85	MTH98	1	out	1	\|ali\|phd\|phdHtm\|	61	9	9	16.01	52	FYESSHKLEISPGIIAVIFI

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