--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Methanobacterium thermoautotrophicum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 287 MTH978 1 in 165 455 2 3 -2.08 164 MEMIIDGEGVSGEKIFTVRN DHMPFGDSGAVEWVRRVSST 288 MTH217 1 in 35 558 1 2 -1.92 165 MSKDTSVLLEEKRVFKPHYT FVAHPAVAEAAVIGKAYPIK 289 MTH701 1 in 10 425 5 2 -5.60 116 MTALINEFVNRVEFDSYEDF PLGLFNGYYRNPEKTSEVWH 290 MTH1448 1 in 7 159 4 7 -4.48 43 SIGNALPEPTIDASEMNDRR VGSQPLMIPRVGYITLWLKG 291 MTH1157 1 in 6 86 2 9 -2.31 75 MSEEDKTTIPRVLVSADEFN AVTNILFAGLLKGLLKSLFG 292 MTH1677 1 in 4 59 9 9 -15.51 54 MKYRESILNFIKQSKRVLRV GIIIIGVIGFIISIIAQLLG 293 MTH1219 1 in 3 232 9 5 -32.00 148 VARHSVNLYTGEYNIDPFII TPQDNQGTGGTGGTQNPPSS 294 MTH1158 1 in 2 68 9 9 -17.10 61 MIILSNKPNIRGIKRVVEDI GFLLAVLLVGVPAMMSILGV 295 MTH111 1 in 1 227 0 6 -0.57 54 DTFIDASSFFTGFFCLIDRR SEAIDLACSVSYQQIMTSIE 296 MTH1266 1 in 1 79 9 9 -11.21 78 MQHFQCTFIQSGSGGNALWF MCVKIIVLALYAPVEFIVII 297 MTH1411 1 in 1 50 9 9 -16.67 48 VGDIHFKCNLTMVLMTCKGD IDLDFLRHSFQVYLRFLFFA 298 MTH1545 1 in 1 291 9 4 -10.00 110 VLKKGVNMDMKPLPGMEING IEFITGEGQALVAESGFEPL 299 MTH1899 1 in 1 57 2 9 -2.27 47 MYSAAPCPASSFKNFILYTS LINLADNTLVILLCSHQYQH 300 MTH294 1 in 1 154 3 8 -3.11 36 VLQYFDSGGISVDKLTKILI EARQEIRKEAMKYRGRPPKA 301 MTH343 1 in 1 328 4 4 -4.97 291 LRVCAVVVTYNRKDLLVECL AYSDGLRGRFDNEKPRRILY 302 MTH392 1 in 1 74 4 9 -4.66 43 VRSMNRLRTGSLTALILSAA SMARPEEDEAEDRVDEPFIG 303 MTH427 1 in 1 667 4 2 -4.70 41 LKGDEMIRGFNDDEGGFIFT TAQALARQELIAMLQGIRLQ 304 MTH435 1 in 1 248 9 5 -9.46 74 MISRDHPRYHSLIQREMITE NLENIRETLKLIDLRRYNPE 305 MTH534 1 in 1 187 1 7 -1.33 33 MIIKDLRGQGGAEYILLFAA GGGSPFKFTSDQVKVRGNVS 306 MTH654 1 in 1 254 9 5 -25.33 24 MKIGRLTIIDILIILFLASL DVIEKIKGKYSVIKVVNLNN 307 MTH660 1 in 1 102 9 9 -13.08 31 VLPLNSTKKGRLFAILMIAL VTVYIDNRTNRSSTPFNRNQ 308 MTH1453 1 out 34 476 4 2 4.01 433 VGDPRSGIEPGTPFEELPDD VDNYDLTPIGDPEEDIRKIL 309 MTH563 1 out 34 293 7 4 7.24 98 MRGSIMILLDEDTRCLVQGI AVVVDRPSAIVDEIRAQLGV 310 MTH683 1 out 14 240 0 5 0.04 163 VITIITQDQLKTSPSVREDG VEGCLRIHEVQKEALRKRYG 311 MTH1363 1 out 13 1329 9 0 10.29 1322 LRTSVIPVILLMTIMLAGGV IIGVISLVCLLGVGYFFQGR 312 MTH800 1 out 13 273 2 4 2.44 141 LIRVAVTGACGRMGSGIIRR RFIEDAEPGRIMDMGDVLGI 313 MTH317 1 out 11 826 9 1 46.00 818 VWGWLQDNTTLYNTGKLPPT IIAIVGLMGAGYLLSGRRKI 314 MTH1159 1 unk 8 238 0 5 0.00 238 VVEKKSPAEGWPVVNGDYIV KVQGIMIGLAFTLTLGILLL 315 MTH1160 1 unk 6 100 0 9 0.00 100 MEMLPLVKIAPEYNLTLDPS KLTNMVYGFILGLIILFALL 316 MTH1460 1 out 6 447 6 2 7.00 123 MRVVLAGTGSAVGKTTIATG HIHAASCPQFAANFTRNAWE 317 MTH1543 1 out 5 433 9 2 10.04 325 MTQMDEAKKGVITDEMKAVA EYCAVKIVNEWLDSADTRIF 318 MTH270 1 out 5 52 5 9 5.16 41 LINNYYMESENENRIVGLLA QLVGYLVGIFLIIYGVLKIF 319 MTH406 1 out 5 211 9 5 41.11 202 MKVKEIMDKEFIAVSPEDRV FVGLIAIGELVIARKIARAR 320 MTH172 1 out 3 332 9 4 20.57 276 MPETYIITPNLNGVSFLEVY SEIKEYLTMRWSVKVPSPQE 321 MTH479 1 out 3 293 9 5 17.67 25 MDRKYIALAAIAAVIIIAIA GKAEYGQPLFTALFGGEEPK 322 MTH957 1 out 3 385 9 4 14.94 42 MADSITTIVTALGFPSIESF VIARSKREPGFPEAMVKEML 323 MTH1110 1 out 2 151 6 8 6.64 48 VIHLQHTPPAVTALMIPAVL LASEKYTIIEIPIRRIIVNS 324 MTH1294 1 out 2 155 6 8 6.00 24 VGPVELLAILILAGAIVVLI NKKLESLDRRLRRLEEKEEK 325 MTH1426 1 out 2 359 1 3 1.28 252 MEMFDGLKIYGSGNYLEGVT HGIPVEMVRERIEELCNTIL 326 MTH231 1 out 2 242 1 4 1.64 197 MYGSEGGAMRIVAGVGENRN GYLRALKFAHWLARGWNEDN 327 MTH92 1 out 2 70 9 9 18.50 55 MKGEENVNMIVVALTLCIMN FFITLILMTLGLFAKIKPKA 328 MTH1123 1 out 1 115 3 9 3.23 81 LNCDKHPEREGVASCIICGR NVMRILMNDPERIIRFLSAN 329 MTH1399 1 out 1 300 9 4 10.00 27 MDDCGYVMAGASLLLMIPVI ISGFIIYLDAGHMTKYGVRR 330 MTH1462 1 out 1 338 7 3 8.00 251 MAPAKTFHPLMEDTEHDYHC AGPRGGFKSMKRIWDARKHF 331 MTH1533 1 out 1 87 6 9 6.12 38 MFSESFLLDESGQSSSEYIL PPTNNTSGPGPEPEPIPPSF 332 MTH154 1 out 1 93 3 9 3.17 79 MIIFSPLVRKVYMEVYNNLI RMGFVGCVVGFNVFRMKYLD 333 MTH1772 1 out 1 131 9 9 16.00 23 MTISVLGVLLIIGTILVFAY KTARYQLQVASQALSDVRAL 334 MTH1778 1 out 1 73 9 9 11.92 30 VIPPRTIYGKAITSILMLVG ERGIEDLRREVAEIKEMLKK 335 MTH1857 1 out 1 63 9 9 11.43 28 MVLGIPDPWVWGAYILCILI IMEELRWEEEEKRMEEDELG 336 MTH211 1 out 1 281 9 4 12.00 28 VFLMDPIPVNVAVTVLVSVA VIRTVSAWKTGEDPVFPQSR 337 MTH229 1 out 1 189 0 7 0.00 184 LSNENTAKTRGYLICTECGG MALLIFVVICFLYFFIAVKF 338 MTH351 1 out 1 1561 9 0 17.00 1553 MEGIRVILMAVFLVFVLPGT GVVVLVALVGVGYFIGGKGR 339 MTH363 1 out 1 273 2 6 2.89 59 MMIRRSGVPAILTVHGWVMD EKWRRLILEVTGMSPDATGK 340 MTH533 1 out 1 91 9 9 12.73 36 VTMGPGAGTETPAIGIDVLI GISDDEENEEEQGFSDEKDE 341 MTH54 1 out 1 212 9 6 17.00 204 MNGMVGYIIIWDEKTNTGRV VGVLVAAGLVAFGFLRGGAG 342 MTH58 1 unk 1 85 0 9 0.00 85 MTGAIELTGITGKQRVPIDG DTVIVIPAWLIILLVLGATV 343 MTH629 1 out 1 57 4 9 4.31 32 VLDHILTRITPATTIIRPAS VKMGKAATTGTTTEASPDLR 344 MTH670 1 out 1 94 6 9 6.00 28 MAGSANLVDAMLVLSVGFLI YVEMGTVYRDPKTGKLIMVQ 345 MTH673 1 out 1 1708 9 0 24.57 1701 MDIEKFKGGEKIMRKHLITV LGVIALVALVGVGYFMGPGR 346 MTH694 1 out 1 198 8 7 8.00 40 VFILFSMAPLSYYHICVDTM YSTIGSVDLDAFEVLKAGKM 347 MTH714 1 out 1 1787 9 0 17.33 1778 LTYNVTALVGNAGNQDTSGV GVLILVVLMAIGYFRASRKE 348 MTH731 1 out 1 308 9 4 16.00 298 MCGGPSIGAAVGGSFDAYVV GFIMVLLVLFRSSLISSFRR 349 MTH74 1 out 1 91 2 9 2.91 53 MKQYISKVEGILLDYESWYK YEIRWMMVMLLIVGLIASPG 350 MTH85 1 out 1 41 9 9 35.71 27 MITPLYVPNIINARIMAIIH LISSFFPFNSSTKKCNQNKR 351 MTH880 1 out 1 67 9 9 19.20 64 MEVIVMVEPHKHCPVCSTPI MIFYLVFALFIVVWVVLSIR 352 MTH913 1 out 1 433 9 3 26.32 414 VFVKKPDETTGPLHAVFVDG GMYLFRRRAGRSNEAIWQPG 353 MTH928 1 out 1 1668 6 0 6.00 1658 VKMIRKRSVTLLITVVFVFM GIVAIVGLLGLGYFFGPGRT 354 MTH979 1 out 1 63 9 9 14.44 34 LHGLIADESGQGSAELILVF TAMNSDVQNVTNSIKGLKNK 355 MTH995 1 out 1 445 2 3 2.91 29 VNTMRVSGFMLTALIIASVI VKVDYYNRVAEKSELNNLRK