--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Methanococcus jannaschii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 MJ1525 17 out 1 933 8 0 8.21 41,138,163,191,220,257,282,316,338,381,447,477,499,529,559,597,815 MYIKVKLMSNALEKINNFFK DFGIQPGFKIYKVDYGTDYL 2 MJ1068 14 in 1 507 9 0 -12.70 33,60,111,150,189,212,254,295,343,370,393,422,462,492 LSYKEKAVKGVSWHLLSYFL FGLKIINIYEVKDIISKIIK 3 MJ1485 14 in 1 474 5 0 -5.30 37,62,97,136,160,205,227,254,294,334,356,408,438,463 MGICRLTKKDIEGILHILGG IIPVLVLFATLYFKTLRLLK 4 MJ0326 13 in 6 436 7 1 -7.91 45,79,108,130,156,198,220,260,311,347,369,403,435 VIMKFVEKYFEFEKYGTNLK VHWLVYVLAVIFALRFVYLS 5 MJ0672 13 in 1 432 8 9 -8.56 23,55,88,139,177,213,254,283,314,348,372,397,430 MRLSKEFIGLGIITASLIFG IGMILSILSAAVITLYSILY 6 MJ1521 13 in 1 422 9 0 -9.91 22,47,76,112,137,178,206,234,257,300,328,367,403 VNIVLFLGYLSILFAGGAII LEASWAKPLANILLKRKTST 7 MJ0057 13 out 4 426 8 1 8.98 23,48,78,114,137,181,205,234,257,305,328,364,403 MELMMAIGYLGLALVLGSLV GMLALKLLGEYKPKYKEESH 8 MJ0609 12 in 1 435 5 0 -5.36 34,61,102,131,172,204,244,290,335,362,391,416 MELKNKKLSLWEAVSMAVGV FEIIYRKVTKRTFSNNMYVK 9 MJ0709 12 in 1 450 9 2 -12.31 40,70,113,150,192,215,262,300,341,379,410,439 MKNVEILLDDPKKAVIEVSK TAGIFAFLFGVLAIKALIKS 10 MJ1375 12 in 1 415 9 2 -9.50 39,61,99,133,172,194,232,272,314,347,373,402 MSLCKDSIYILMSNLYSKGM TSISVFLIGVFAILRIKKHI 11 MJ1079 12 out 1 397 5 1 5.13 19,48,70,119,148,177,199,239,280,318,364,395 MLNLLYLILGIICGTITGLF TNLSNMMNVLIFPTILYFLR 12 MJ1275 12 out 1 388 4 2 4.11 23,45,71,106,130,168,198,236,283,312,343,374 MESYYYVFFIILSIIFIVPN TITPIVVKHIFVAKCNKKAK 13 MJ1309 12 out 1 481 6 2 6.76 22,49,90,130,177,211,254,282,334,373,417,463 MNYLPMMIVFPLIMAIIMNL DIVTNYLWDYAKELGVNYYL 14 MJ1560 11 in 3 386 6 2 -6.29 30,57,96,119,155,177,234,264,299,321,374 MGKLEKNVFVIWITTFTTML YKFSAIFSIVVGIISYLRIE 15 MJ0718 11 in 2 402 3 0 -3.72 44,82,111,144,183,233,255,307,329,354,383 MMMHPMNKTNKRDKMEKRNN YKKYNMLLVVLLSLVLGYLI 16 MJ1196 11 in 1 366 9 2 -9.98 40,62,104,131,155,188,224,266,312,334,364 MGHLTLKDAVFLTITSIVGG LISMLITGLLILFRVYNFII 17 MJ1319 11 out 59 492 4 2 4.44 62,110,167,199,244,280,333,377,407,450,482 VSYMERESWSSNLGFILASV IIPLAFVVSVILQKMKTIKG 18 MJ0419 11 out 2 354 7 0 7.24 39,61,96,131,166,201,224,246,272,296,343 MLLLHWDNMGKIELHHVFVM LYYFFGLILCIYAILLRKLK 19 MJ0584 11 out 1 365 5 1 5.77 36,58,88,125,147,191,222,269,299,333,361 MKMDVMSFIMNIINVMINTI YLGLVVIFSTICGYIAGIIL 20 MJ0091 10 in 3 302 1 0 -1.95 20,57,93,128,150,181,213,250,276,298 MLILGVGYFLLGLILLYYGS RWQGILFLALYIIAIASLRM 21 MJ1031 10 in 2 308 9 2 -11.53 21,52,82,118,146,187,211,241,280,305 VIPMDVVLIVLILVLVGYFS IFITTTFSLLVIALWGWILL 22 MJ1270 10 in 2 345 9 2 -10.12 23,54,93,116,143,185,242,264,288,318 MSIDLISMILLWFGLYYIVS IPEKPIITPPMKKKIMEISG 23 MJ0305 10 in 1 395 2 2 -2.62 41,66,106,160,193,228,267,300,341,380 MPMNIVNMFGKYIKIIKWIG IGAVIGYQMTKLETIFKYIR 24 MJ0420 10 in 1 380 3 2 -3.63 41,70,92,114,147,193,231,268,324,364 MHICNIIEKIKKIDLFHPVS LLLYINAKLVFAKLLKLINE 25 MJ0576 10 in 1 347 6 4 -6.05 39,68,105,132,172,203,236,271,306,331 MLEACESKLDIIKNFVPSWF WAITLIKTTNKVYTGEVFKG 26 MJ0762 10 in 1 342 7 3 -7.21 36,60,98,125,164,196,230,264,299,325 MQSYIKNFESSWFAAVMGTG VTLIKTINKVYSGELFKDKI 27 MJ0901 10 in 1 562 9 0 -11.62 50,72,228,250,291,315,469,494,517,549 VVIVVFDLLPRVGLKPRDYL IVAYITKLIVSQVLGVSVPL 28 MJ1317 10 in 1 398 2 2 -2.18 59,81,116,184,242,279,312,334,372,397 MVRKVAEQNLQKNNENDREL EMTFLYGSVLAIISGLLLLF 29 MJ0058 10 out 2 391 8 1 8.20 32,68,108,132,168,209,240,285,326,360 VFEVKHMDGIDVFFFMWAAS EEAEKVGLDTAILQTTAYSE 30 MJ1286 10 out 1 595 4 1 4.17 92,114,142,260,298,354,383,524,565,588 LKNLLKRYVSIKNIIKVIEL IKHILLMLIVGYMLFKFYIG 31 MJ1362 10 out 1 322 3 0 3.86 24,55,86,123,145,174,209,259,290,318 MIDELISIIGIPALAFAIST PISYVATLIGVIGFIFALLG