--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Methanococcus jannaschii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 32 MJ0087 9 in 14 349 2 3 -2.19 36,86,118,154,182,228,277,316,340 MDIPQKYKLYTKKKIIFGII LTSFLGAPMFLYLLLKMYKR 33 MJ0630 9 in 8 297 5 1 -5.55 22,59,100,143,168,202,243,265,293 VITIEISINLELIISFYLLF FWWVVAPIIALIIGFIINRM 34 MJ0478 9 in 7 440 9 2 -10.14 52,92,136,161,200,231,280,336,407 LENIMKKLIPILEKIPEVEL EQLLREKVSELHPAIAKLLN 35 MJ0374 9 in 2 330 2 2 -2.20 38,72,130,152,185,210,232,294,322 MISGGYMDLYAMAEYLVNNY IIGIFCGCLTRIDIYKLIDN 36 MJ0456 9 in 1 352 9 3 -18.92 26,49,98,166,215,243,276,316,347 MKIDTFIFLMFISIGILLLL GGIIYIMHLIVLVAYAKIFW 37 MJ0876 9 out 3 351 0 3 0.31 26,78,109,145,168,217,266,303,340 MNKVGILLILFILSLILPFT ILGGMLVVYLVYKGEKKIKI 38 MJ1269 9 out 2 315 6 3 6.83 36,62,87,120,169,217,249,272,298 LVKLLLKDLGEKMILEGAII IAPYGITGVDWKKLKRLLST 39 MJ0871 8 in 1 317 0 3 -0.80 40,81,127,152,204,246,272,314 VIVVDYITPLMESMKISAYY MVNAAITLLLDIFIIAGLLL 40 MJ1177 8 in 1 334 2 0 -2.48 35,83,110,156,223,252,275,317 MRFEEFKYVRKGVIVGLLIM GPLVVGALNAFYLAKYRDKK 41 MJ1595 8 in 1 336 9 3 -18.16 28,59,87,148,177,251,273,320 LMKIKITKSTILLIISFLFI TILGYIAMLIIKREIDKKKG 42 MJ0566 8 out 7 668 7 0 7.93 304,326,358,445,467,529,629,663 MKSYEIALIGNPNVGKSTIF YEMILAYVVALVISVIGNLL 43 MJ0441 8 out 4 267 0 3 0.27 40,75,108,130,177,205,233,267 MVIKLEFEFLLLLPLLIIVG PKHLRIMLSSILGVMGLFML 44 MJ0520 8 out 2 295 8 1 8.46 28,91,113,150,186,236,259,285 VMLMDTSLIGAINLTIHAFL LQMTIAGLVLCDVLYRLIVG 45 MJ0440 8 out 1 299 8 1 8.06 77,106,138,164,187,228,260,292 LYYKLVLSHYSKTSTLINIT CIMALGLAPGLRDLFRTVMG 46 MJ1036 8 out 1 233 5 3 5.91 27,63,85,131,153,181,205,233 VSNMVEVPIFIAILSFIVMC EEKTFLYILLGYILVGIIAL 47 MJ1226 7 in 75 805 1 1 -1.05 85,245,278,648,701,765,790 LWGVVMNVEEIEEEYKTSIK HVWMLINDEIKMILLKRLKI 48 MJ0139 7 in 4 209 9 3 -12.12 29,60,92,115,143,174,199 MNLKDRRLKKIMEVLSLIFT FSVLFFISGLITSLQKALKG 49 MJ0678 7 in 3 320 9 2 -11.27 127,156,185,227,254,281,319 MKLRFIECHIPKHLFMGIDE LYAILLWVTLFIAIFVLIIY 50 MJ0790 7 in 2 229 0 4 -0.53 28,67,91,120,157,179,225 MNWKGHTILGIIFGLPFISS LVAIWALMAVYVWKYMILSL 51 MJ1113 7 in 2 301 5 3 -5.33 25,80,123,166,188,227,299 MGHYFINLFTYTIIAFIFSA TVLWIIGIFFGIVGILISLI 52 MJ0279 7 in 1 283 1 2 -1.43 35,58,118,166,230,252,281 LGVFMEKLKTYLELIRVKNC KFLKIIMNIVLLAFIVGAIK 53 MJ1368 7 out 4 249 2 3 2.09 27,69,106,138,188,210,240 MEKFDIAMTVFLVMIFLFIF MILISIALFALLRMFGRMRG 54 MJ0222 7 out 1 695 9 1 9.27 408,445,513,553,575,625,658 VILVRPVRMKKLKAVILDEK FYEGGGKKFSPFKANREYTT 55 MJ0880 7 out 1 308 6 5 6.99 28,114,137,197,233,271,305 MDILPYLTKIILLSSIGITI INYTISVMIKILLILLLIAF 56 MJ0923 7 out 1 297 5 5 5.52 36,74,96,124,147,189,224 MEIFKLLRKDRKMLFLMFIG KEILKTLVEVVVFNNDKDEN 57 MJ0938 7 out 1 250 7 3 7.57 27,65,87,114,139,216,240 LIIKVMVMLLIELTYAFIFV SSAVISGILICYLMYKEIIR 58 MJ0971 7 out 1 365 0 3 0.57 26,83,127,152,193,303,362 LNMDTSKVILIVAIIIWIIL LGSITLLVWWVILGSILYSM 59 MJ1024 7 out 1 403 1 3 1.16 52,206,260,287,323,352,382 MNSGDIMKLNIKKILTIGKR GVLLYEENLTLKRVIKIIFK 60 MJ1089 7 out 1 268 1 0 1.67 46,68,93,118,141,169,256 VGFMKHNIVDNVAFSNKLRH IFLIILAYLTKDFTLTSYIK 61 MJ1189 7 out 1 283 1 3 1.46 49,87,143,167,220,242,267 MKKLEYYLKDAFYYVLSDVK AVFAKRAIALYYKDRVEELK 62 MJ1307 7 out 1 262 0 3 0.43 27,54,77,130,161,199,241 MNSKRDLAVAISFFVFGASV FLLSCEKVIIEKISKSEEKL 63 MJ1556 7 out 1 312 5 2 5.98 38,78,135,205,243,281,310 MMDKIIQTLTLTFTFLYYSI MISTLVRILXTALFVIITLI