--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Methanococcus jannaschii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 64 MJ0847 6 in 6 303 8 3 -8.30 79,105,154,178,251,286 MDATLIALGALALSGALATV LAIINRKVEVFARNKYGPYT 65 MJ1014 6 in 4 315 9 5 -10.79 42,101,138,184,246,304 LKTMEIKKLLRKIDEFKIIT GLVVNIIGIYYLKRWREHVS 66 MJ0413 6 in 3 267 9 4 -11.93 35,95,129,151,207,249 VMNHKKGISVKINTKELVLK VLDRGLRYIEDKYFVWRKMM 67 MJ1013 6 in 3 281 9 4 -14.46 40,89,125,152,204,272 MSPIKHKTIRMIKDKIFLFI LIIFLAIFVPIRYALKDDIK 68 MJ0111 6 in 2 396 6 0 -6.91 32,264,292,314,353,382 MDISKLLKDRKILILIIFVT IGIFITRPAFARIIEEMFKK 69 MJ0449 6 in 2 283 9 1 -9.79 30,57,95,127,165,187 MREVEKPLILSIVGNILLGL KNRLESLENVERAYVHVDIV 70 MJ0849 6 in 2 265 0 3 -0.18 48,110,132,157,188,240 MSHGGGGHAAELYPEEQIFA KMSFKDACAVLHVPEIPKKE 71 MJ0096 6 in 1 262 9 5 -16.39 43,111,158,188,229,254 MEVKAMEIFKKYLSLNIPKK AAFATGYKNLFLYLISMLFK 72 MJ0233 6 in 1 277 9 5 -9.20 42,79,132,161,215,263 MGTIESYLTNSYNYIIFNFK YLGVFSIRAVALYYKDRKGI 73 MJ0662 6 in 1 239 9 1 -10.00 30,78,114,152,190,212 VDKRILVRLAIYPIAYVLWG AGHIKPCILCGKCKERETHE 74 MJ0700 6 in 1 324 2 0 -2.85 29,58,106,140,196,281 MIDNKLKLVIKVVLLIFLLH VKLAYPHIKAVIETENKFKN 75 MJ0797 6 in 1 367 9 1 -13.61 37,173,237,261,315,350 MYFELAKRNLKRNLLRSILA SALYPAYKASKLDPIKSLRN 76 MJ0976 6 in 1 366 8 3 -8.94 51,90,156,181,226,248 MSEDSNPKNDLKLKMYETFR LNEAKYIINNKINELTQSDS 77 MJ1092 6 in 1 214 9 3 -16.00 20,70,100,139,166,207 MVMIMELLYAITAFILGMLH SIIILIGLYTIAHPILEHAI 78 MJ1221 6 in 1 299 9 3 -10.88 136,158,197,225,251,280 LWFGERMRYMKIIIPKKFLN DVGGYIGLKYKVGKINQKIK 79 MJ1253 6 in 1 282 9 2 -10.57 26,143,172,194,232,261 MIKDYKVSIAIPIALLILSI TWLLNAGILKYYITEYRAKK 80 MJ1438 6 in 1 258 4 5 -4.14 57,80,136,159,206,255 LGITMFKEFKALLSFFTRIP RVVVLLSIIASIKVFSIYLL 81 MJ1589 6 in 1 241 4 4 -4.42 29,58,103,125,178,216 MMMALQIFIKILPIMFFGIL LLDENILSPNEVLFSLFLAG 82 MJ0972 6 out 4 228 9 5 10.55 41,83,105,151,183,219 LVGYSGEHFIFNVVKYMDIL AISVQIIFTGIVGLYNSISV 83 MJ1677 6 out 3 205 9 5 10.05 27,66,88,134,164,197 MDLQYFILAFSSIFSILNPF GLILTAIAVQMIVNGIRGAL 84 MJ0848 6 out 2 230 4 0 4.57 30,67,102,160,189,229 MDIVSAIVPLIEMTIAGAII GVIASTVASLLFGIISVLMV 85 MJ1091 6 out 2 233 1 4 1.53 29,61,98,129,154,187 LHIMEGYLPPMWCAVWWVLS LGVVPEEELKPYLTPSPAGG 86 MJ0523 6 out 1 234 9 0 12.22 32,62,84,155,192,216 VGEMENIIYSIYHPTILVGF LGLVIKVGSKLGLIGYIGEV 87 MJ0611 6 out 1 191 3 0 3.00 37,59,91,139,161,188 MSIFRFSQREIIDLTISVLA PFIWAIVGLPLIGYMLYMMF 88 MJ0902 6 out 1 238 8 1 8.00 23,53,75,106,135,226 LGEKMINFIVGAIGLLIASI YLLTSIIGDKIIGIFLSVFG 89 MJ0392 5 in 3 339 6 2 -6.74 39,61,118,140,198 MNYSIRLFKIMGIPIELHIT ISKTDILRAMSILELKEELK 90 MJ1314 5 in 3 307 2 3 -2.00 78,100,177,227,307 MLNPIILFLAIIFDRIIGEL KAVDYTVVVFLIIYTLIWWI 91 MJ0779 5 in 2 299 3 0 -3.37 55,77,103,221,279 MPKYLTTLYKRTIKRNIILF TMTIGVLAYYTILKFAPGIF 92 MJ0129 5 in 1 170 9 6 -13.35 19,55,80,124,155 MLSFVVMSFLIFVIVMVNEH MLLFLKTYSIIIKQLKKLEN 93 MJ0433 5 in 1 175 9 0 -10.88 54,76,104,127,166 MDAKEILELVEESYKSEDGD QFLIFAFVQFLVALCFLICK 94 MJ0780 5 in 1 335 5 3 -5.76 123,152,177,297,327 MKGIFEKLKRRIDILLYKLG LLKIGPLLTLIFGIFVKLKI 95 MJ0793 5 in 1 178 9 5 -9.74 23,72,94,120,170 MKIPIILTLMLFSLGFIFGF IVIAAFIEVYITPKIATYLL 96 MJ0933 5 in 1 238 4 3 -4.87 26,65,119,187,237 LEVDTMETLIRLFVSILIIC HVNLIATIVGGIIGVLIYCT 97 MJ1078 5 in 1 234 5 5 -5.04 54,91,147,184,217 MFINSLVPAKLGDVYRGYLL GAIMFYIVERNILKEPKNEK 98 MJ1137 5 in 1 191 2 6 -2.27 33,55,100,150,186 LREIYRQTIHLVFGVLIAFS PFIVAFIINHQINICSLMNF 99 MJ1571 5 in 1 292 8 4 -8.03 80,119,161,204,287 LFKIYNIKSRIIRENMNNKL AFLLFSIIITALLVLFDRGI 100 MJ1600 5 in 1 177 3 0 -3.26 23,72,96,140,165 MFYRLLFASLWYILPAYVAN VFVHLLGNIIAYKLGIKDVW 101 MJECL39 5 in 1 351 1 0 -1.91 75,112,134,156,192 VPILLEHIQLNDEDLKDTKH DEGKFAVNVYYEIPNSIPNS 102 MJ1343 5 out 10 420 8 3 8.25 48,92,138,166,197 LWGENIATADLFANATDIHS EKMGLDMAEHKMPAYPEETV 103 MJ0749 5 out 9 246 9 4 9.66 51,80,102,146,174 LDSRVYIIKFDNWGFMVNLM MSVCKKGALSFSAFTKNTKK 104 MJ0750 5 out 3 238 6 1 6.15 34,65,87,123,152 MDKIQILRKISQTLFFIYFV ECKSSCKKDALSFSYAFKKR 105 MJ0027 5 out 1 184 9 4 9.20 52,74,120,142,169 MGSLLMERNFMVEDTFTNGK LVIGYLKIIEKYRHSSNKSH 106 MJ0170 5 out 1 350 9 3 14.50 30,80,109,157,189 VNMEIFGNSISNILIFVVIT FEKEGIEMAFPTYTVYLEKD 107 MJ0271 5 out 1 180 0 4 0.96 40,88,110,145,171 MDLKSNIKLILATDLLAVLI IMLVITANMFIIEFYTFKKF 108 MJ0522 5 out 1 218 9 5 10.14 39,100,144,180,212 MIESITGYLFGIVPFGDIVF LMIHLSSLLLIVRTVEILLT 109 MJ0998 5 out 1 241 4 5 4.54 26,55,91,123,158 LKSLYALIFLLFVIVVSYIF YSHILARILKNDEEKMKIPT 110 MJ1032 5 out 1 366 9 3 14.20 191,243,278,317,345 MEKEGVKNYLVLVVDIDDDI LFTKSSKEDKFKKLKNSITK 111 MJ1143 5 out 1 361 9 3 11.11 36,84,111,162,194 MTITQMISEILMHNTVYNYI FDRKGIEFAFPTYTLYLKRD 112 MJ1147 5 out 1 462 8 0 8.45 122,160,400,423,453 LFILIIKCGIMEKEVISSRE VTSLILLGNLYIAVRRKLSR 113 MJ1397 5 out 1 486 1 0 1.46 25,137,183,383,464 LGTMRSVYLIIIIILFFAFI FLSDKKAYDVAVEIGLEAYL 114 MJ1492 5 out 1 156 7 5 7.78 26,51,86,115,149 MKKYYLIVLISFLIFYLSIF GFTVVFYILPIFFEMIYKKF 115 MJ1562 5 out 1 388 2 2 2.52 39,251,286,344,369 MVVLMLREILKKVAHFSEQK LIVIEERHIMPLIKRLKGDT 116 MJ1569 5 out 1 222 9 2 12.77 26,99,122,156,198 MHIPDGYLGPITCAFFYLIM VKKVRPDLFTSKEQQVSGVN 117 MJ1682 4 in 11 284 5 0 -5.31 35,57,160,198 MINQIKTYLLMALLVGLIYA THPPTEERIERLLEMCKRIG 118 MJ0565 4 in 4 147 5 9 -5.06 34,66,105,136 MDIKNMRNVIVSLSLVFGLL VLGMLAIIPYRIAKIISSST 119 MJ1358 4 in 2 152 9 5 -9.54 19,55,80,142 LGVVFAFGFYLIFIKLTGLK FFIPVVVFFNCKYFYEMELS 120 MJ1523 4 in 2 124 2 4 -2.14 31,54,80,119 MIRELLLIGVGGFFGAIFRY NVVGCLIMVYFGRVLALAIF 121 MJ0527 4 in 1 164 9 1 -9.55 24,94,132,154 MEIVEIVKIIIAGIICWLNF FEHRYASILLGKIAKKMNRG 122 MJ0554 4 in 1 152 9 7 -11.61 36,62,108,140 MVNEHKAHASFMFKIINVFV FTKLLIDAYFITLKKLKSLK 123 MJ0587 4 in 1 153 9 6 -10.52 37,64,104,140 MVNEYKAHSSFILKVVITLI ITTLIIKYLKIIKNLKKISK 124 MJ0704 4 in 1 377 9 3 -15.38 48,87,123,155 MFAFEGFKWEIVEIFDWKGL LEKLINKCNNKLRELESQNN 125 MJ0706 4 in 1 214 2 8 -2.87 57,114,160,204 MRDAYLMMVLMDALKEIFDL FIVAGIVEGTITFKIAKIMF 126 MJ0979 4 in 1 197 9 6 -20.53 30,106,130,192 MLPKKIDYIKIALIVVGIIA GWYLTMIIGLALIAYPFIRK 127 MJ1114 4 in 1 192 9 6 -20.43 46,75,142,164 MDIVEKVYKEGILKLKENIP RIATEKLEKALEKSVKNEEN 128 MJ1290 4 in 1 312 9 1 -15.23 22,64,201,303 MKKAIYLLILCIFGLFSVYF GIIIGFGIIGLAIYLSKRGR 129 MJ1527 4 in 1 140 8 0 -8.91 34,59,82,111 LNIYLISKVFIKYHLFQNIL ERYKFPVFGDIAERYYREFL 130 MJ1577 4 in 1 598 9 1 -9.06 27,290,454,481 MREEKEIIIVCLLIFIVGVV TGSGGGFGAGGGFGGGGGGA 131 MJECS05 4 in 1 144 9 4 -14.81 37,64,110,137 MESKEYRKLEYNYKAFLIFS LMAGLFILVVLVIWYFGYKS 132 MJ0221 4 out 28 220 1 5 1.29 77,142,167,216 MVDPLILGAVGAGLAVGIAG MPETFAIFGLLIAILIMLMI 133 MJ1212 4 out 3 201 0 8 0.17 38,96,142,186 MFSIRKIITISDYVTMLNII FALMLCLIYAIYGIIKYIRG 134 MJ0131 4 out 2 103 9 3 14.10 22,46,69,91 MPGVIFWTIFIIQFMIWVFL SWIGLLFGLKLSGNNDTPQI 135 MJ0480 4 out 2 198 9 6 10.77 39,121,160,189 MFGSIFDIYYKTLDAIFMPI GWYILCSFATSTVLRKILGI 136 MJ0585 4 out 1 205 9 1 37.99 21,124,155,198 MKKLAFLILLIVFSNLSLVN PISMYGWILIGLAVKFIIKK 137 MJ0645 4 out 1 191 9 4 10.00 59,128,157,184 VLRIPRSLKSIINTINGESG IKMVAGALAVAILCFMIEKA 138 MJ0759 4 out 1 118 0 8 0.53 32,66,88,116 LVIKKGEIMNEIISLVSLSV SAHLALMGMMFILALGNVIL 139 MJ1365 4 out 1 397 1 3 1.11 276,316,338,387 MVIILRHVRVFNGVNECDIY SNLGASIGVFYCLGKFIGFL 140 MJ1644 4 out 1 177 8 9 8.88 40,85,112,161 VIKMELKEAKYLGGIGAVLN VAQILEIVAYFSLPDDLKSE