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Transmembrane helices for metja (Methanococcus jannaschii)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
64MJ08476in6|ali|phd|phdHtm|30383-8.3079,105,154,178,251,286MDATLIALGALALSGALATV
65MJ10146in4|ali|phd|phdHtm|31595-10.7942,101,138,184,246,304LKTMEIKKLLRKIDEFKIIT
66MJ04136in3|ali|phd|phdHtm|26794-11.9335,95,129,151,207,249VMNHKKGISVKINTKELVLK
67MJ10136in3|ali|phd|phdHtm|28194-14.4640,89,125,152,204,272MSPIKHKTIRMIKDKIFLFI
68MJ01116in2|ali|phd|phdHtm|39660-6.9132,264,292,314,353,382MDISKLLKDRKILILIIFVT
69MJ04496in2|ali|phd|phdHtm|28391-9.7930,57,95,127,165,187MREVEKPLILSIVGNILLGL
70MJ08496in2|ali|phd|phdHtm|26503-0.1848,110,132,157,188,240MSHGGGGHAAELYPEEQIFA
71MJ00966in1|ali|phd|phdHtm|26295-16.3943,111,158,188,229,254MEVKAMEIFKKYLSLNIPKK
72MJ02336in1|ali|phd|phdHtm|27795-9.2042,79,132,161,215,263MGTIESYLTNSYNYIIFNFK
73MJ06626in1|ali|phd|phdHtm|23991-10.0030,78,114,152,190,212VDKRILVRLAIYPIAYVLWG
74MJ07006in1|ali|phd|phdHtm|32420-2.8529,58,106,140,196,281MIDNKLKLVIKVVLLIFLLH
75MJ07976in1|ali|phd|phdHtm|36791-13.6137,173,237,261,315,350MYFELAKRNLKRNLLRSILA
76MJ09766in1|ali|phd|phdHtm|36683-8.9451,90,156,181,226,248MSEDSNPKNDLKLKMYETFR
77MJ10926in1|ali|phd|phdHtm|21493-16.0020,70,100,139,166,207MVMIMELLYAITAFILGMLH
78MJ12216in1|ali|phd|phdHtm|29993-10.88136,158,197,225,251,280LWFGERMRYMKIIIPKKFLN
79MJ12536in1|ali|phd|phdHtm|28292-10.5726,143,172,194,232,261MIKDYKVSIAIPIALLILSI
80MJ14386in1|ali|phd|phdHtm|25845-4.1457,80,136,159,206,255LGITMFKEFKALLSFFTRIP
81MJ15896in1|ali|phd|phdHtm|24144-4.4229,58,103,125,178,216MMMALQIFIKILPIMFFGIL
82MJ09726out4|ali|phd|phdHtm|2289510.5541,83,105,151,183,219LVGYSGEHFIFNVVKYMDIL
83MJ16776out3|ali|phd|phdHtm|2059510.0527,66,88,134,164,197MDLQYFILAFSSIFSILNPF
84MJ08486out2|ali|phd|phdHtm|230404.5730,67,102,160,189,229MDIVSAIVPLIEMTIAGAII
85MJ10916out2|ali|phd|phdHtm|233141.5329,61,98,129,154,187LHIMEGYLPPMWCAVWWVLS
86MJ05236out1|ali|phd|phdHtm|2349012.2232,62,84,155,192,216VGEMENIIYSIYHPTILVGF
87MJ06116out1|ali|phd|phdHtm|191303.0037,59,91,139,161,188MSIFRFSQREIIDLTISVLA
88MJ09026out1|ali|phd|phdHtm|238818.0023,53,75,106,135,226LGEKMINFIVGAIGLLIASI
89MJ03925in3|ali|phd|phdHtm|33962-6.7439,61,118,140,198MNYSIRLFKIMGIPIELHIT
90MJ13145in3|ali|phd|phdHtm|30723-2.0078,100,177,227,307MLNPIILFLAIIFDRIIGEL
91MJ07795in2|ali|phd|phdHtm|29930-3.3755,77,103,221,279MPKYLTTLYKRTIKRNIILF
92MJ01295in1|ali|phd|phdHtm|17096-13.3519,55,80,124,155MLSFVVMSFLIFVIVMVNEH
93MJ04335in1|ali|phd|phdHtm|17590-10.8854,76,104,127,166MDAKEILELVEESYKSEDGD
94MJ07805in1|ali|phd|phdHtm|33553-5.76123,152,177,297,327MKGIFEKLKRRIDILLYKLG
95MJ07935in1|ali|phd|phdHtm|17895-9.7423,72,94,120,170MKIPIILTLMLFSLGFIFGF
96MJ09335in1|ali|phd|phdHtm|23843-4.8726,65,119,187,237LEVDTMETLIRLFVSILIIC
97MJ10785in1|ali|phd|phdHtm|23455-5.0454,91,147,184,217MFINSLVPAKLGDVYRGYLL
98MJ11375in1|ali|phd|phdHtm|19126-2.2733,55,100,150,186LREIYRQTIHLVFGVLIAFS
99MJ15715in1|ali|phd|phdHtm|29284-8.0380,119,161,204,287LFKIYNIKSRIIRENMNNKL
100MJ16005in1|ali|phd|phdHtm|17730-3.2623,72,96,140,165MFYRLLFASLWYILPAYVAN
101MJECL395in1|ali|phd|phdHtm|35110-1.9175,112,134,156,192VPILLEHIQLNDEDLKDTKH
102MJ13435out10|ali|phd|phdHtm|420838.2548,92,138,166,197LWGENIATADLFANATDIHS
103MJ07495out9|ali|phd|phdHtm|246949.6651,80,102,146,174LDSRVYIIKFDNWGFMVNLM
104MJ07505out3|ali|phd|phdHtm|238616.1534,65,87,123,152MDKIQILRKISQTLFFIYFV
105MJ00275out1|ali|phd|phdHtm|184949.2052,74,120,142,169MGSLLMERNFMVEDTFTNGK
106MJ01705out1|ali|phd|phdHtm|3509314.5030,80,109,157,189VNMEIFGNSISNILIFVVIT
107MJ02715out1|ali|phd|phdHtm|180040.9640,88,110,145,171MDLKSNIKLILATDLLAVLI
108MJ05225out1|ali|phd|phdHtm|2189510.1439,100,144,180,212MIESITGYLFGIVPFGDIVF
109MJ09985out1|ali|phd|phdHtm|241454.5426,55,91,123,158LKSLYALIFLLFVIVVSYIF
110MJ10325out1|ali|phd|phdHtm|3669314.20191,243,278,317,345MEKEGVKNYLVLVVDIDDDI
111MJ11435out1|ali|phd|phdHtm|3619311.1136,84,111,162,194MTITQMISEILMHNTVYNYI
112MJ11475out1|ali|phd|phdHtm|462808.45122,160,400,423,453LFILIIKCGIMEKEVISSRE
113MJ13975out1|ali|phd|phdHtm|486101.4625,137,183,383,464LGTMRSVYLIIIIILFFAFI
114MJ14925out1|ali|phd|phdHtm|156757.7826,51,86,115,149MKKYYLIVLISFLIFYLSIF
115MJ15625out1|ali|phd|phdHtm|388222.5239,251,286,344,369MVVLMLREILKKVAHFSEQK
116MJ15695out1|ali|phd|phdHtm|2229212.7726,99,122,156,198MHIPDGYLGPITCAFFYLIM
117MJ16824in11|ali|phd|phdHtm|28450-5.3135,57,160,198MINQIKTYLLMALLVGLIYA
118MJ05654in4|ali|phd|phdHtm|14759-5.0634,66,105,136MDIKNMRNVIVSLSLVFGLL
119MJ13584in2|ali|phd|phdHtm|15295-9.5419,55,80,142LGVVFAFGFYLIFIKLTGLK
120MJ15234in2|ali|phd|phdHtm|12424-2.1431,54,80,119MIRELLLIGVGGFFGAIFRY
121MJ05274in1|ali|phd|phdHtm|16491-9.5524,94,132,154MEIVEIVKIIIAGIICWLNF
122MJ05544in1|ali|phd|phdHtm|15297-11.6136,62,108,140MVNEHKAHASFMFKIINVFV
123MJ05874in1|ali|phd|phdHtm|15396-10.5237,64,104,140MVNEYKAHSSFILKVVITLI
124MJ07044in1|ali|phd|phdHtm|37793-15.3848,87,123,155MFAFEGFKWEIVEIFDWKGL
125MJ07064in1|ali|phd|phdHtm|21428-2.8757,114,160,204MRDAYLMMVLMDALKEIFDL
126MJ09794in1|ali|phd|phdHtm|19796-20.5330,106,130,192MLPKKIDYIKIALIVVGIIA
127MJ11144in1|ali|phd|phdHtm|19296-20.4346,75,142,164MDIVEKVYKEGILKLKENIP
128MJ12904in1|ali|phd|phdHtm|31291-15.2322,64,201,303MKKAIYLLILCIFGLFSVYF
129MJ15274in1|ali|phd|phdHtm|14080-8.9134,59,82,111LNIYLISKVFIKYHLFQNIL
130MJ15774in1|ali|phd|phdHtm|59891-9.0627,290,454,481MREEKEIIIVCLLIFIVGVV
131MJECS054in1|ali|phd|phdHtm|14494-14.8137,64,110,137MESKEYRKLEYNYKAFLIFS
132MJ02214out28|ali|phd|phdHtm|220151.2977,142,167,216MVDPLILGAVGAGLAVGIAG
133MJ12124out3|ali|phd|phdHtm|201080.1738,96,142,186MFSIRKIITISDYVTMLNII
134MJ01314out2|ali|phd|phdHtm|1039314.1022,46,69,91MPGVIFWTIFIIQFMIWVFL
135MJ04804out2|ali|phd|phdHtm|1989610.7739,121,160,189MFGSIFDIYYKTLDAIFMPI
136MJ05854out1|ali|phd|phdHtm|2059137.9921,124,155,198MKKLAFLILLIVFSNLSLVN
137MJ06454out1|ali|phd|phdHtm|1919410.0059,128,157,184VLRIPRSLKSIINTINGESG
138MJ07594out1|ali|phd|phdHtm|118080.5332,66,88,116LVIKKGEIMNEIISLVSLSV
139MJ13654out1|ali|phd|phdHtm|397131.11276,316,338,387MVIILRHVRVFNGVNECDIY
140MJ16444out1|ali|phd|phdHtm|177898.8840,85,112,161VIKMELKEAKYLGGIGAVLN

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