--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Methanococcus jannaschii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 141 MJ1219 3 in 5 104 2 9 -2.14 41,67,94 VVNMAPNTNFASLVAVAGCV AFIVMSILILIFGNNRGGYY 142 MJ1223 3 in 5 92 9 9 -14.03 20,53,75 MNIYVWLFAIIALSFSALVG VGAFAFCKVIGGDNEKAKQP 143 MJ0138 3 in 1 482 1 1 -1.82 81,347,377 MEIGILDIKGSLPLFEDFGN KDEEDNFLERLDNWMENINK 144 MJ0288 3 in 1 178 9 0 -19.29 24,150,172 MKKFSAIFGLLSVIFVIMAI ITAVLIISILGLGAMLIRRH 145 MJ0545 3 in 1 251 4 1 -4.17 27,128,249 LVGKMKKVIIPLLISLFIFL GILGLIIGIVFGFVVMYIIK 146 MJ0696 3 in 1 182 9 6 -18.75 20,84,106 VESILFIAIAFLINSFISYK KYDEEIENIIKNQIEKFRDK 147 MJ0794 3 in 1 141 1 9 -1.43 51,91,130 VILMNLIEALTNPDTFFKKL ALITIPIAYYMREISQQEMR 148 MJ1033 3 in 1 317 2 0 -2.59 144,277,310 MITVIAIAKDGSIVEPKLDE MALMVVIIMIFVYIFRRSGW 149 MJ1282 3 in 1 352 8 1 -8.00 20,124,261 MRKIILIFFIFLILQNIYAY EVPGIAIYGDLINLLEMRFN 150 MJ1590 3 in 1 105 0 9 -0.95 35,58,80 MRISPLIAGLIGGFTAAILQ ETELKQTHSPVYWFHIRNFS 151 MJ0877 3 out 11 123 9 9 10.78 50,85,113 LDANLLGEKYAISVGVDIKS LSIIGAPIAIIIYLKIRKMG 152 MJ1491 3 out 10 127 3 9 3.94 53,85,116 VKYMVSFDQERMLKPAVIGG IIFGAILGAVGGVIYVVIKN 153 MJ0067 3 out 6 103 9 8 25.96 25,50,99 VIILDFSQFLPDIGSGFIIG IHSFSFGTSFLIGFGLGFKK 154 MJ0138_1 3 out 6 333 9 2 14.52 29,51,84 METYEKIELGIIVIILLILI IYAFGTKEQLEKLKRYVEGV 155 MJ1507 3 out 5 399 3 4 3.85 286,337,379 LGKSMKVDDIITFAFKNIKQ SGYFPARSGAKLNPIETLRG 156 MJ1306 3 out 4 83 6 9 6.68 24,53,76 MLDAILSNYLYYPSILAFLF SYLSAVIGIIIGNRLFGGKM 157 MJ1310 3 out 3 128 9 8 14.80 35,57,111 MIMINYLVNRMDFQMASFIT VSIILYKKYKTLRSSVILKE 158 MJ1617 3 out 3 93 2 2 2.08 26,61,86 MIMKPILIFLGIILMFIGFF VLIAILMIIWMFLFAFGIRI 159 MJ0437 3 out 2 79 9 9 23.19 24,47,69 MEIIHYIVIIMTLLSSLASL GGAILPALFAFTVRRTQRID 160 MJ0137 3 out 1 286 4 1 4.00 30,116,147 MWGEKMDPLSGFISSLIWWL VRQRGTVEFMPYPVKQENGA 161 MJ0201 3 out 1 160 9 8 14.42 62,121,148 MINLELFKEFLLNLIKDYGY SRLIRHGMVILPFVLKDHIH 162 MJ0321 3 out 1 122 9 4 11.18 36,80,107 MTNNDKIVAIVTSIAVICIS IIGYYFGYRSGKESKNSSGN 163 MJ0342 3 out 1 123 9 4 18.42 39,61,108 MRWLTPFGMLFISGTYYGLI PVIIVFLGKQLMRGLYEKIK 164 MJ0518 3 out 1 94 9 9 13.16 23,63,93 MGLFELNLAIILFIIGNFIG YGRVEFVVGLAVALFLYFLR 165 MJ0528 3 out 1 98 9 6 13.68 32,61,83 MVYNNSLLVRVMDIIILYLI FFAGLFGALLSKYADKLFGE 166 MJ0610 3 out 1 434 0 0 0.86 145,258,324 MGLNITGLIPKHMENRGKLT SAIGVKKEDIYKVIEKLDEV 167 MJ0803 3 out 1 172 9 8 12.04 29,76,109 MNSYGVILISYVGLIKLALA PVHLKYSKELEDIIKNYLKK 168 MJ0958 3 out 1 426 9 0 13.33 21,115,421 MKKFILFLIILLFSIYFLNV NWYIIVLIIAGLLWMAILWK 169 MJ1067 3 out 1 148 6 5 6.68 63,85,129 MNITGIKLKIPTKITKIHFL AIKIANGVTIIREYKKTFST 170 MJ1254 3 out 1 469 5 2 5.29 59,189,267 LIAFLFYKCFAKNYKINFLY RKEKIGRINKLTLTEESKKL 171 MJ1308 3 out 1 108 9 9 13.89 51,73,104 LVDFMDYNDFQKKLDKEEHG LFWLSIFLGAIAFCIYMTTR 172 MJ1354 3 out 1 145 9 2 18.18 28,95,124 MDVGIILGILSAMGFLVFLG ILRFRAIKEFNKAFIEELTT 173 MJ1357 3 out 1 343 9 0 11.58 31,53,83 METSKKLVIVAVLSITLILT FGTEENLKYLENLVKKKKKK 174 MJ1361 3 out 1 292 8 1 8.87 79,202,224 MRAYPIKTRYIKRGENFIPI LEHTPVVVVKIKEEYKPESQ 175 MJ1443 3 out 1 110 9 7 15.46 36,60,86 VIFMGKTSLGLDENIEGALC AYKGEKFKLPVIGDIAEQYS 176 MJ1495 3 out 1 292 9 0 11.93 37,83,150 VILIIYLTKIMGDEMTSMDM KPSVYYIPVPYSKKESEKNA 177 MJ1506 3 out 1 437 1 2 1.33 57,252,422 LLYILKCKSNYIINFHRLPQ IIILYIRKRKRHQEFEEFEE 178 MJ1566 3 out 1 447 9 0 11.25 210,398,433 MGFKYLKIKNPKVILTEWIP ILGVYVGKIVIEYRKKKVLG 179 MJ1580 3 out 1 124 9 8 13.58 31,64,94 MLIKILEEKLMELIQIVGVI QITHIVREIAIRDRYEPKKR 180 MJECS09 3 out 1 237 6 1 6.68 68,103,168 MPLPEYGTDNSDNFVRFIYF RYLHTLKTPKNLTTTEVVRH