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Transmembrane helices for metja (Methanococcus jannaschii)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 141 | MJ1219 | 3 | in | 5 | |ali|phd|phdHtm| | 104 | 2 | 9 | -2.14 | 41,67,94 | VVNMAPNTNFASLVAVAGCV |
| 142 | MJ1223 | 3 | in | 5 | |ali|phd|phdHtm| | 92 | 9 | 9 | -14.03 | 20,53,75 | MNIYVWLFAIIALSFSALVG |
| 143 | MJ0138 | 3 | in | 1 | |ali|phd|phdHtm| | 482 | 1 | 1 | -1.82 | 81,347,377 | MEIGILDIKGSLPLFEDFGN |
| 144 | MJ0288 | 3 | in | 1 | |ali|phd|phdHtm| | 178 | 9 | 0 | -19.29 | 24,150,172 | MKKFSAIFGLLSVIFVIMAI |
| 145 | MJ0545 | 3 | in | 1 | |ali|phd|phdHtm| | 251 | 4 | 1 | -4.17 | 27,128,249 | LVGKMKKVIIPLLISLFIFL |
| 146 | MJ0696 | 3 | in | 1 | |ali|phd|phdHtm| | 182 | 9 | 6 | -18.75 | 20,84,106 | VESILFIAIAFLINSFISYK |
| 147 | MJ0794 | 3 | in | 1 | |ali|phd|phdHtm| | 141 | 1 | 9 | -1.43 | 51,91,130 | VILMNLIEALTNPDTFFKKL |
| 148 | MJ1033 | 3 | in | 1 | |ali|phd|phdHtm| | 317 | 2 | 0 | -2.59 | 144,277,310 | MITVIAIAKDGSIVEPKLDE |
| 149 | MJ1282 | 3 | in | 1 | |ali|phd|phdHtm| | 352 | 8 | 1 | -8.00 | 20,124,261 | MRKIILIFFIFLILQNIYAY |
| 150 | MJ1590 | 3 | in | 1 | |ali|phd|phdHtm| | 105 | 0 | 9 | -0.95 | 35,58,80 | MRISPLIAGLIGGFTAAILQ |
| 151 | MJ0877 | 3 | out | 11 | |ali|phd|phdHtm| | 123 | 9 | 9 | 10.78 | 50,85,113 | LDANLLGEKYAISVGVDIKS |
| 152 | MJ1491 | 3 | out | 10 | |ali|phd|phdHtm| | 127 | 3 | 9 | 3.94 | 53,85,116 | VKYMVSFDQERMLKPAVIGG |
| 153 | MJ0067 | 3 | out | 6 | |ali|phd|phdHtm| | 103 | 9 | 8 | 25.96 | 25,50,99 | VIILDFSQFLPDIGSGFIIG |
| 154 | MJ0138_1 | 3 | out | 6 | |ali|phd|phdHtm| | 333 | 9 | 2 | 14.52 | 29,51,84 | METYEKIELGIIVIILLILI |
| 155 | MJ1507 | 3 | out | 5 | |ali|phd|phdHtm| | 399 | 3 | 4 | 3.85 | 286,337,379 | LGKSMKVDDIITFAFKNIKQ |
| 156 | MJ1306 | 3 | out | 4 | |ali|phd|phdHtm| | 83 | 6 | 9 | 6.68 | 24,53,76 | MLDAILSNYLYYPSILAFLF |
| 157 | MJ1310 | 3 | out | 3 | |ali|phd|phdHtm| | 128 | 9 | 8 | 14.80 | 35,57,111 | MIMINYLVNRMDFQMASFIT |
| 158 | MJ1617 | 3 | out | 3 | |ali|phd|phdHtm| | 93 | 2 | 2 | 2.08 | 26,61,86 | MIMKPILIFLGIILMFIGFF |
| 159 | MJ0437 | 3 | out | 2 | |ali|phd|phdHtm| | 79 | 9 | 9 | 23.19 | 24,47,69 | MEIIHYIVIIMTLLSSLASL |
| 160 | MJ0137 | 3 | out | 1 | |ali|phd|phdHtm| | 286 | 4 | 1 | 4.00 | 30,116,147 | MWGEKMDPLSGFISSLIWWL |
| 161 | MJ0201 | 3 | out | 1 | |ali|phd|phdHtm| | 160 | 9 | 8 | 14.42 | 62,121,148 | MINLELFKEFLLNLIKDYGY |
| 162 | MJ0321 | 3 | out | 1 | |ali|phd|phdHtm| | 122 | 9 | 4 | 11.18 | 36,80,107 | MTNNDKIVAIVTSIAVICIS |
| 163 | MJ0342 | 3 | out | 1 | |ali|phd|phdHtm| | 123 | 9 | 4 | 18.42 | 39,61,108 | MRWLTPFGMLFISGTYYGLI |
| 164 | MJ0518 | 3 | out | 1 | |ali|phd|phdHtm| | 94 | 9 | 9 | 13.16 | 23,63,93 | MGLFELNLAIILFIIGNFIG |
| 165 | MJ0528 | 3 | out | 1 | |ali|phd|phdHtm| | 98 | 9 | 6 | 13.68 | 32,61,83 | MVYNNSLLVRVMDIIILYLI |
| 166 | MJ0610 | 3 | out | 1 | |ali|phd|phdHtm| | 434 | 0 | 0 | 0.86 | 145,258,324 | MGLNITGLIPKHMENRGKLT |
| 167 | MJ0803 | 3 | out | 1 | |ali|phd|phdHtm| | 172 | 9 | 8 | 12.04 | 29,76,109 | MNSYGVILISYVGLIKLALA |
| 168 | MJ0958 | 3 | out | 1 | |ali|phd|phdHtm| | 426 | 9 | 0 | 13.33 | 21,115,421 | MKKFILFLIILLFSIYFLNV |
| 169 | MJ1067 | 3 | out | 1 | |ali|phd|phdHtm| | 148 | 6 | 5 | 6.68 | 63,85,129 | MNITGIKLKIPTKITKIHFL |
| 170 | MJ1254 | 3 | out | 1 | |ali|phd|phdHtm| | 469 | 5 | 2 | 5.29 | 59,189,267 | LIAFLFYKCFAKNYKINFLY |
| 171 | MJ1308 | 3 | out | 1 | |ali|phd|phdHtm| | 108 | 9 | 9 | 13.89 | 51,73,104 | LVDFMDYNDFQKKLDKEEHG |
| 172 | MJ1354 | 3 | out | 1 | |ali|phd|phdHtm| | 145 | 9 | 2 | 18.18 | 28,95,124 | MDVGIILGILSAMGFLVFLG |
| 173 | MJ1357 | 3 | out | 1 | |ali|phd|phdHtm| | 343 | 9 | 0 | 11.58 | 31,53,83 | METSKKLVIVAVLSITLILT |
| 174 | MJ1361 | 3 | out | 1 | |ali|phd|phdHtm| | 292 | 8 | 1 | 8.87 | 79,202,224 | MRAYPIKTRYIKRGENFIPI |
| 175 | MJ1443 | 3 | out | 1 | |ali|phd|phdHtm| | 110 | 9 | 7 | 15.46 | 36,60,86 | VIFMGKTSLGLDENIEGALC |
| 176 | MJ1495 | 3 | out | 1 | |ali|phd|phdHtm| | 292 | 9 | 0 | 11.93 | 37,83,150 | VILIIYLTKIMGDEMTSMDM |
| 177 | MJ1506 | 3 | out | 1 | |ali|phd|phdHtm| | 437 | 1 | 2 | 1.33 | 57,252,422 | LLYILKCKSNYIINFHRLPQ |
| 178 | MJ1566 | 3 | out | 1 | |ali|phd|phdHtm| | 447 | 9 | 0 | 11.25 | 210,398,433 | MGFKYLKIKNPKVILTEWIP |
| 179 | MJ1580 | 3 | out | 1 | |ali|phd|phdHtm| | 124 | 9 | 8 | 13.58 | 31,64,94 | MLIKILEEKLMELIQIVGVI |
| 180 | MJECS09 | 3 | out | 1 | |ali|phd|phdHtm| | 237 | 6 | 1 | 6.68 | 68,103,168 | MPLPEYGTDNSDNFVRFIYF |
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