--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Methanococcus jannaschii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 181 MJ0705 2 in 49 405 9 2 -9.22 305,391 MENYNDILEKMLNGEIKPYQ LSLLGALAAGHLGKAHQELG 182 MJ1015 2 in 11 389 9 0 -10.04 37,143 LNDTTQPTKGDAVKKILALI YVGLPEDVAKIGLNAVNMIK 183 MJ0606 2 in 10 91 2 9 -2.46 51,86 MDLEGKCCLIHAIGGIIFGY GVLPFFLVAIVVWVLKFNGL 184 MJ0149 2 in 5 58 9 9 -29.73 33,55 MLRDIAFEFFIMIALGIFIG LLGIFCAFGRLFKMIKDYEK 185 MJ0519 2 in 3 84 3 9 -3.58 37,79 VDKMKSYIYFFTIACIIAVI LFMLLVLAFFAYAIYKLYIP 186 MJ1398 2 in 3 391 9 3 -16.73 26,213 MKKDTLLLIILILFCIVHVY SKEEGNRIVYYINESILKFH 187 MJ1417 2 in 2 649 1 1 -2.00 131,161 MFSIKFKTTEELPEPSPRLI LDEIVPLVFDLDNRGGAERF 188 MJ1433 2 in 2 247 9 6 -22.22 32,56 MNDKRYMLIIAICLIFLSIL SLCLRANPFDNKSIIIEEDD 189 MJ0106 2 in 1 238 4 2 -4.37 40,96 LVDSMKFVEKAKIEFENPIV ELAEQHLKMMSKSRKEYPMY 190 MJ0158 2 in 1 374 0 0 -0.13 100,337 MLSDYEEFLRLEKARKIILE RIDDNYIIKAIVESIKMAFK 191 MJ0184 2 in 1 77 9 6 -20.00 31,60 VNIMITKQFDRHLKYYTTIV LVSMFFLGRLLDFMAKMDLK 192 MJ0357 2 in 1 155 9 0 -10.00 118,140 MEAPPKCALKFSNYIVKHIE MANIEEVKEENTEKQETEAY 193 MJ0482 2 in 1 240 6 1 -6.03 22,44 MKSPHKVIYCYLIILYKLSS KFLKVEEKQKDKEETENREE 194 MJ0524 2 in 1 158 9 5 -17.08 41,155 LRWVIMKKLGKIWNYLSKPE LESSILLISFIIFSWLFFNK 195 MJ0526 2 in 1 92 9 9 -21.05 37,66 LEVLPLVSGICCILGGIGVI KYLTTVKKKKRYGRNLPILS 196 MJ0574 2 in 1 93 0 9 -0.34 35,72 MWPCPIGFGMVGFPIFGFFF LLSKRNSKSKGDNNGKNIGS 197 MJ0638 2 in 1 225 5 0 -5.46 119,195 MKEVKDFYDKWEPEDFPNYI KKLSKIFKNKGQFLIIEMVK 198 MJ0650 2 in 1 692 9 1 -18.77 24,685 LVNFMKRILIFFILFLLFCG IFIILTIIAIYIVVKINKKL 199 MJ0755 2 in 1 342 9 0 -12.50 25,91 MWKKLMLLLLMAIPLVSAVA GGIGGINAPHIYHQRINSTI 200 MJ0792 2 in 1 89 9 9 -16.67 30,82 MKFLEKGVYKIFGAVILVSM LGPAGLASGVFTVVFSTTVL 201 MJ0795 2 in 1 504 9 1 -38.00 24,496 MKRLKNLFIIFIFLFLLSQV IAILFCVGVVYLIYRGFVKK 202 MJ0826 2 in 1 138 9 9 -12.90 31,60 MEIGYIFILAGFLVIALEAI DKVEIVGVEGVSLIVKKVEG 203 MJ0835 2 in 1 377 4 2 -4.37 42,269 MVDTSKIKALKEKSRRTVKS KIPDIIQIDPKDIVIVIKSK 204 MJ0995 2 in 1 227 3 7 -3.62 32,108 MYGDYMKYMKKIVLFLIINI KVYVYLEFNGIDLNLINNGI 205 MJ1017 2 in 1 203 9 5 -25.64 32,54 MKVKVYRVGGITGIFLIFLI LKDRMSISELKRFEIGDMVL 206 MJ1069 2 in 1 392 9 1 -10.89 91,118 MRKIKLIIFPGYYIPHIGGL ENFNWKKSVKEYKKIFERLV 207 MJ1080 2 in 1 135 9 8 -10.13 30,116 MEGKIMNIKHKIPILLLVLY FYLFRVLFKDDWVALIEVVL 208 MJ1090 2 in 1 95 9 7 -22.57 22,86 METKHIILLAIVAIIIALPL IGAIIIGYYIGYYNAKRQVA 209 MJ1291 2 in 1 240 6 1 -6.67 27,225 MNKSGMSLIITMLLLIGTAI FEIIASTKYGDVEKKITFEI 210 MJ1293 2 in 1 231 9 1 -24.00 101,123 MTNKTRKETNEIKNNITLPP IYKPENLSIGGFLVVDIKKE 211 MJ1467 2 in 1 184 8 3 -8.32 68,133 VEKYKLRKNNTILLYDYSIN ITVTIDKNNITICKELTINI 212 MJ1468 2 in 1 1009 9 1 -24.57 25,1002 MKLLKILMPLIILGIISIVN IEILIVISTIFCFFQIIRGL 213 MJ1480 2 in 1 423 8 0 -8.67 236,373 MFMREIELRGHIIDSLILPK MLVEELEKLEKEKEKSEKRE 214 MJ1505 2 in 1 784 0 0 -0.90 60,684 LKSRITMFIEHPLIKPKTLE EGVGKERAKKIREVLTAEYE 215 MJ1553 2 in 1 157 6 9 -6.89 96,151 MKFLFSKTKIEILKKLNERN LIISTFLIIFIVYLVYKIIR 216 MJ1570 2 in 1 115 9 9 -13.76 29,103 MNWQDPLVKKFLYLIVAMVI ILCVGAYYALIKIVNPKAAA 217 MJ1586 2 in 1 491 2 3 -2.29 285,460 VRRDINNFLFGERMELFEIL GYYYTPLDLIEKIPNVLKIF 218 MJ1664 2 in 1 226 5 0 -5.42 114,181 MNKLKLKNEKEVRIKFGEYK DKLIEKEKNKIFKELKDIFN 219 MJECL34 2 in 1 295 0 1 -0.48 157,196 VKHMTPGLTEKKLYVYYDER EILKLEKEILEVIQKKCENK 220 MJECL38 2 in 1 259 9 0 -12.18 86,251 VANMQSLTNIEVQRFHDCEW ICTSIIITILEIVTSIIKKT 221 MJ0081 2 out 12 451 0 1 0.28 149,326 LVLVMLHYEDRIDLYDERGK REPLKYVAEGAVEVKEKEKV 222 MJ0842 2 out 11 449 0 1 0.48 149,327 VGVIPMVKYKDTINLYDEKG DEFREPLKYVIKGALEVKDK 223 MJ1479 2 out 3 432 2 1 2.44 116,398 MRNPIIDVGAKELSYEIREI DEKFEWIFDTLAEKIDEFLK 224 MJ0827 2 out 2 199 9 1 9.10 29,60 LKVNDMFWFWLILGIIALFI QMKAERLKRAAILEAEGEKP 225 MJ0110 2 out 1 93 9 6 27.12 61,83 VVINMDFDITVIGYIAGTLT LSLMFWIPITYLKIRDEMRK 226 MJ0292 2 out 1 93 9 9 17.31 28,79 LVMLMEQFIGIVKDILVLIA ILAPFLAHAIAHAAYNDNLS 227 MJ0418 2 out 1 257 2 0 2.68 24,210 VIIMKKIGILEIVVILSILI NNSIDEIPNKIKENYAIITL 228 MJ0711 2 out 1 322 9 0 11.10 203,318 MDSVLSGKIVQILVGYLKEN LEGTIVALILLEIILALAKI 229 MJ0781 2 out 1 721 9 1 10.19 25,170 LIIKNQLIFVNFYVILIIWW NVSDYIMRYQVDPEKLLRSI 230 MJ0815 2 out 1 308 1 0 1.67 23,264 LLLLQSILITKIMVIQLILF KNANNEELKFKVKGEKFTID 231 MJ1141 2 out 1 214 9 6 14.12 38,68 VISILGLDGFLQLVGMITIA RDGCINTLVDVDELITRLKS 232 MJ1289 2 out 1 165 9 3 9.74 26,126 MNTYLSTLLVLTTIFALSII DNLRHFYVNNSKVYVYSLLM 233 MJ1516 2 out 1 99 8 9 8.05 55,77 VMAMNEIELMQIKDFVKDMD AYKSAKDYNAQLYSIIFSKD 234 MJ1621 2 unk 1 57 0 8 0.00 21,57 MPTVNILSYFAFSVEAVLFP GVEKICLYSFVLVLPIAILM 235 MJECL21 2 out 1 432 0 1 0.29 213,252 MWRGVGMVVQQFINRIRNCP IDLILKGEIEIYDELLDIIF 236 MJECL37 2 out 1 237 9 2 9.00 149,171 MNNFSKNLEECFQKYGYENF TSKLYNKSINTIRSKIMEVS 237 MJECS10 2 out 1 286 5 4 5.48 218,248 LNFKKVSNMPDEIICNFYVN KLMEDVYTTDCENFPCGYFP