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Transmembrane helices for metja (Methanococcus jannaschii)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 181 | MJ0705 | 2 | in | 49 | |ali|phd|phdHtm| | 405 | 9 | 2 | -9.22 | 305,391 | MENYNDILEKMLNGEIKPYQ |
| 182 | MJ1015 | 2 | in | 11 | |ali|phd|phdHtm| | 389 | 9 | 0 | -10.04 | 37,143 | LNDTTQPTKGDAVKKILALI |
| 183 | MJ0606 | 2 | in | 10 | |ali|phd|phdHtm| | 91 | 2 | 9 | -2.46 | 51,86 | MDLEGKCCLIHAIGGIIFGY |
| 184 | MJ0149 | 2 | in | 5 | |ali|phd|phdHtm| | 58 | 9 | 9 | -29.73 | 33,55 | MLRDIAFEFFIMIALGIFIG |
| 185 | MJ0519 | 2 | in | 3 | |ali|phd|phdHtm| | 84 | 3 | 9 | -3.58 | 37,79 | VDKMKSYIYFFTIACIIAVI |
| 186 | MJ1398 | 2 | in | 3 | |ali|phd|phdHtm| | 391 | 9 | 3 | -16.73 | 26,213 | MKKDTLLLIILILFCIVHVY |
| 187 | MJ1417 | 2 | in | 2 | |ali|phd|phdHtm| | 649 | 1 | 1 | -2.00 | 131,161 | MFSIKFKTTEELPEPSPRLI |
| 188 | MJ1433 | 2 | in | 2 | |ali|phd|phdHtm| | 247 | 9 | 6 | -22.22 | 32,56 | MNDKRYMLIIAICLIFLSIL |
| 189 | MJ0106 | 2 | in | 1 | |ali|phd|phdHtm| | 238 | 4 | 2 | -4.37 | 40,96 | LVDSMKFVEKAKIEFENPIV |
| 190 | MJ0158 | 2 | in | 1 | |ali|phd|phdHtm| | 374 | 0 | 0 | -0.13 | 100,337 | MLSDYEEFLRLEKARKIILE |
| 191 | MJ0184 | 2 | in | 1 | |ali|phd|phdHtm| | 77 | 9 | 6 | -20.00 | 31,60 | VNIMITKQFDRHLKYYTTIV |
| 192 | MJ0357 | 2 | in | 1 | |ali|phd|phdHtm| | 155 | 9 | 0 | -10.00 | 118,140 | MEAPPKCALKFSNYIVKHIE |
| 193 | MJ0482 | 2 | in | 1 | |ali|phd|phdHtm| | 240 | 6 | 1 | -6.03 | 22,44 | MKSPHKVIYCYLIILYKLSS |
| 194 | MJ0524 | 2 | in | 1 | |ali|phd|phdHtm| | 158 | 9 | 5 | -17.08 | 41,155 | LRWVIMKKLGKIWNYLSKPE |
| 195 | MJ0526 | 2 | in | 1 | |ali|phd|phdHtm| | 92 | 9 | 9 | -21.05 | 37,66 | LEVLPLVSGICCILGGIGVI |
| 196 | MJ0574 | 2 | in | 1 | |ali|phd|phdHtm| | 93 | 0 | 9 | -0.34 | 35,72 | MWPCPIGFGMVGFPIFGFFF |
| 197 | MJ0638 | 2 | in | 1 | |ali|phd|phdHtm| | 225 | 5 | 0 | -5.46 | 119,195 | MKEVKDFYDKWEPEDFPNYI |
| 198 | MJ0650 | 2 | in | 1 | |ali|phd|phdHtm| | 692 | 9 | 1 | -18.77 | 24,685 | LVNFMKRILIFFILFLLFCG |
| 199 | MJ0755 | 2 | in | 1 | |ali|phd|phdHtm| | 342 | 9 | 0 | -12.50 | 25,91 | MWKKLMLLLLMAIPLVSAVA |
| 200 | MJ0792 | 2 | in | 1 | |ali|phd|phdHtm| | 89 | 9 | 9 | -16.67 | 30,82 | MKFLEKGVYKIFGAVILVSM |
| 201 | MJ0795 | 2 | in | 1 | |ali|phd|phdHtm| | 504 | 9 | 1 | -38.00 | 24,496 | MKRLKNLFIIFIFLFLLSQV |
| 202 | MJ0826 | 2 | in | 1 | |ali|phd|phdHtm| | 138 | 9 | 9 | -12.90 | 31,60 | MEIGYIFILAGFLVIALEAI |
| 203 | MJ0835 | 2 | in | 1 | |ali|phd|phdHtm| | 377 | 4 | 2 | -4.37 | 42,269 | MVDTSKIKALKEKSRRTVKS |
| 204 | MJ0995 | 2 | in | 1 | |ali|phd|phdHtm| | 227 | 3 | 7 | -3.62 | 32,108 | MYGDYMKYMKKIVLFLIINI |
| 205 | MJ1017 | 2 | in | 1 | |ali|phd|phdHtm| | 203 | 9 | 5 | -25.64 | 32,54 | MKVKVYRVGGITGIFLIFLI |
| 206 | MJ1069 | 2 | in | 1 | |ali|phd|phdHtm| | 392 | 9 | 1 | -10.89 | 91,118 | MRKIKLIIFPGYYIPHIGGL |
| 207 | MJ1080 | 2 | in | 1 | |ali|phd|phdHtm| | 135 | 9 | 8 | -10.13 | 30,116 | MEGKIMNIKHKIPILLLVLY |
| 208 | MJ1090 | 2 | in | 1 | |ali|phd|phdHtm| | 95 | 9 | 7 | -22.57 | 22,86 | METKHIILLAIVAIIIALPL |
| 209 | MJ1291 | 2 | in | 1 | |ali|phd|phdHtm| | 240 | 6 | 1 | -6.67 | 27,225 | MNKSGMSLIITMLLLIGTAI |
| 210 | MJ1293 | 2 | in | 1 | |ali|phd|phdHtm| | 231 | 9 | 1 | -24.00 | 101,123 | MTNKTRKETNEIKNNITLPP |
| 211 | MJ1467 | 2 | in | 1 | |ali|phd|phdHtm| | 184 | 8 | 3 | -8.32 | 68,133 | VEKYKLRKNNTILLYDYSIN |
| 212 | MJ1468 | 2 | in | 1 | |ali|phd|phdHtm| | 1009 | 9 | 1 | -24.57 | 25,1002 | MKLLKILMPLIILGIISIVN |
| 213 | MJ1480 | 2 | in | 1 | |ali|phd|phdHtm| | 423 | 8 | 0 | -8.67 | 236,373 | MFMREIELRGHIIDSLILPK |
| 214 | MJ1505 | 2 | in | 1 | |ali|phd|phdHtm| | 784 | 0 | 0 | -0.90 | 60,684 | LKSRITMFIEHPLIKPKTLE |
| 215 | MJ1553 | 2 | in | 1 | |ali|phd|phdHtm| | 157 | 6 | 9 | -6.89 | 96,151 | MKFLFSKTKIEILKKLNERN |
| 216 | MJ1570 | 2 | in | 1 | |ali|phd|phdHtm| | 115 | 9 | 9 | -13.76 | 29,103 | MNWQDPLVKKFLYLIVAMVI |
| 217 | MJ1586 | 2 | in | 1 | |ali|phd|phdHtm| | 491 | 2 | 3 | -2.29 | 285,460 | VRRDINNFLFGERMELFEIL |
| 218 | MJ1664 | 2 | in | 1 | |ali|phd|phdHtm| | 226 | 5 | 0 | -5.42 | 114,181 | MNKLKLKNEKEVRIKFGEYK |
| 219 | MJECL34 | 2 | in | 1 | |ali|phd|phdHtm| | 295 | 0 | 1 | -0.48 | 157,196 | VKHMTPGLTEKKLYVYYDER |
| 220 | MJECL38 | 2 | in | 1 | |ali|phd|phdHtm| | 259 | 9 | 0 | -12.18 | 86,251 | VANMQSLTNIEVQRFHDCEW |
| 221 | MJ0081 | 2 | out | 12 | |ali|phd|phdHtm| | 451 | 0 | 1 | 0.28 | 149,326 | LVLVMLHYEDRIDLYDERGK |
| 222 | MJ0842 | 2 | out | 11 | |ali|phd|phdHtm| | 449 | 0 | 1 | 0.48 | 149,327 | VGVIPMVKYKDTINLYDEKG |
| 223 | MJ1479 | 2 | out | 3 | |ali|phd|phdHtm| | 432 | 2 | 1 | 2.44 | 116,398 | MRNPIIDVGAKELSYEIREI |
| 224 | MJ0827 | 2 | out | 2 | |ali|phd|phdHtm| | 199 | 9 | 1 | 9.10 | 29,60 | LKVNDMFWFWLILGIIALFI |
| 225 | MJ0110 | 2 | out | 1 | |ali|phd|phdHtm| | 93 | 9 | 6 | 27.12 | 61,83 | VVINMDFDITVIGYIAGTLT |
| 226 | MJ0292 | 2 | out | 1 | |ali|phd|phdHtm| | 93 | 9 | 9 | 17.31 | 28,79 | LVMLMEQFIGIVKDILVLIA |
| 227 | MJ0418 | 2 | out | 1 | |ali|phd|phdHtm| | 257 | 2 | 0 | 2.68 | 24,210 | VIIMKKIGILEIVVILSILI |
| 228 | MJ0711 | 2 | out | 1 | |ali|phd|phdHtm| | 322 | 9 | 0 | 11.10 | 203,318 | MDSVLSGKIVQILVGYLKEN |
| 229 | MJ0781 | 2 | out | 1 | |ali|phd|phdHtm| | 721 | 9 | 1 | 10.19 | 25,170 | LIIKNQLIFVNFYVILIIWW |
| 230 | MJ0815 | 2 | out | 1 | |ali|phd|phdHtm| | 308 | 1 | 0 | 1.67 | 23,264 | LLLLQSILITKIMVIQLILF |
| 231 | MJ1141 | 2 | out | 1 | |ali|phd|phdHtm| | 214 | 9 | 6 | 14.12 | 38,68 | VISILGLDGFLQLVGMITIA |
| 232 | MJ1289 | 2 | out | 1 | |ali|phd|phdHtm| | 165 | 9 | 3 | 9.74 | 26,126 | MNTYLSTLLVLTTIFALSII |
| 233 | MJ1516 | 2 | out | 1 | |ali|phd|phdHtm| | 99 | 8 | 9 | 8.05 | 55,77 | VMAMNEIELMQIKDFVKDMD |
| 234 | MJ1621 | 2 | unk | 1 | |ali|phd|phdHtm| | 57 | 0 | 8 | 0.00 | 21,57 | MPTVNILSYFAFSVEAVLFP |
| 235 | MJECL21 | 2 | out | 1 | |ali|phd|phdHtm| | 432 | 0 | 1 | 0.29 | 213,252 | MWRGVGMVVQQFINRIRNCP |
| 236 | MJECL37 | 2 | out | 1 | |ali|phd|phdHtm| | 237 | 9 | 2 | 9.00 | 149,171 | MNNFSKNLEECFQKYGYENF |
| 237 | MJECS10 | 2 | out | 1 | |ali|phd|phdHtm| | 286 | 5 | 4 | 5.48 | 218,248 | LNFKKVSNMPDEIICNFYVN |
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