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Transmembrane helices for metja (Methanococcus jannaschii)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
238MJ14111in74|ali|phd|phdHtm|46302-0.48156MFIDGKWINREDMDVINPYS
239MJ07151in11|ali|phd|phdHtm|33843-4.36217MKISIYGAGNQRLYLEQLKV
240MJ08921in10|ali|phd|phdHtm|21777-7.8037MKVFEFLKGKRGAMGIGTLI
241MJ08931in10|ali|phd|phdHtm|22397-11.2144LRLRWPNMLLDYIKSRRGAI
242MJ08911in9|ali|phd|phdHtm|21787-8.2337MKVFEFLKGKRGAMGIGTLI
243MJ10571in6|ali|phd|phdHtm|29014-1.38267MVGEMDKPLVSVVMATYNEP
244MJ14001in3|ali|phd|phdHtm|6769-6.6638MKFIMKFIKSNKGQISLEFS
245MJ04311in2|ali|phd|phdHtm|7579-7.6039VGKMKILKKLLSKKGQLSME
246MJ05361in2|ali|phd|phdHtm|18745-4.93146VNKRRVKMRKEIRLSGFGGQ
247MJ08891in2|ali|phd|phdHtm|46993-24.00296VVGFMIALSVSSGYLLDNNY
248MJ11071in2|ali|phd|phdHtm|14978-7.33143MKFFVVFVMAVAYSKLYELI
249MJ13241in2|ali|phd|phdHtm|23435-3.31205MRVIGVIGYKDSGKTTLIEE
250MJ13861in2|ali|phd|phdHtm|7409-0.2535LKIYDAVVKTTFQISTSIFF
251MJ01501in1|ali|phd|phdHtm|17327-2.4258MGDVKMDKELLHKKIKKDIE
252MJ02091in1|ali|phd|phdHtm|26685-8.6781MLSVMRMQIPKTHPRYESLM
253MJ02701in1|ali|phd|phdHtm|7899-18.2237MKNKREKMRPKSSTILILLM
254MJ02891in1|ali|phd|phdHtm|33893-11.3831VFEMKNSTRYILSLLLSIIM
255MJ03711in1|ali|phd|phdHtm|7429-2.5059MKTDFNQKIEQLKEFIEECR
256MJ05971in1|ali|phd|phdHtm|35744-4.00268LTIGREKMKVEEILENARKA
257MJ06351in1|ali|phd|phdHtm|28393-17.0022VKFMRIVRILAILLALIIGT
258MJ06991in1|ali|phd|phdHtm|38013-2.00360MVVFLLLKSQFLYGEDFKLR
259MJ08301in1|ali|phd|phdHtm|25295-20.1449VVFLKKLIKLKNNLKEKFKN
260MJ08331in1|ali|phd|phdHtm|27794-17.0022LFMKSLIKLIVFIVLCSLFL
261MJ09451in1|ali|phd|phdHtm|22465-7.0038MLLRQYINVPRLGEIMNLKE
262MJ09541in1|ali|phd|phdHtm|44093-12.0033LLRLQMMEGLIVKRTLLLIL
263MJ09661in1|ali|phd|phdHtm|44442-4.00110VIKMIKNVAIIYPNKFKAGI
264MJ11281in1|ali|phd|phdHtm|30894-17.0026VILMKKFEIILFLFIAVLIF
265MJ11571in1|ali|phd|phdHtm|34123-2.2932MLDSPHNLYIKKFMLCYIIY
266MJ12831in1|ali|phd|phdHtm|22036-3.3831MVEMNKRGQFFIIGGVILSI
267MJ12841in1|ali|phd|phdHtm|12199-14.6730MILNNKGFIRILEATIAGIM
268MJ13381in1|ali|phd|phdHtm|35343-4.00227MRNIRKIKVDNMKVSVYGAG
269MJ13731in1|ali|phd|phdHtm|16296-48.0023MKKKIIILFLFTAILCSITL
270MJ13941in1|ali|phd|phdHtm|98761-6.0028VMWGMPNIKLKFIYLCILLF
271MJ14021in1|ali|phd|phdHtm|34694-21.4332MFEWMKNKKAISPILALLIV
272MJ14031in1|ali|phd|phdHtm|37493-12.1349MTVSHGGILEGSSRGGKMMD
273MJ14401in1|ali|phd|phdHtm|28215-1.09227MEGKAYALASGTIINAIATG
274MJ14421in1|ali|phd|phdHtm|20296-9.3333MTSIRIFIKFYGGTMRKFLI
275MJ14701in1|ali|phd|phdHtm|62492-10.6733MFRKIVSKRGYIFTYEAIVI
276MJ14771in1|ali|phd|phdHtm|34693-15.2534VHLNKIRGKNMKKSHILGII
277MJ14821in1|ali|phd|phdHtm|30993-14.00110MDLQNDIIVRGKSYEMPFSK
278MJ16511in1|ali|phd|phdHtm|26315-1.7977LGIYMRDDILDIITLTTDFG
279MJ16661in1|ali|phd|phdHtm|46592-12.00258MQKILIAPWGNFSSWKKVIY
280MJECL151in1|ali|phd|phdHtm|36583-8.00187MKFFNREKEINEILLILEEE
281MJECL161in1|ali|phd|phdHtm|7099-20.4167MSILISNKQFNHGLKDEFAT
282MJECL241out11|ali|phd|phdHtm|259040.88153MVVISIANQKGGVGKTTIAL
283MJ04221out9|ali|phd|phdHtm|290242.24157MRVIILKIKKIFMVMIMIKV
284MJ09601out9|ali|phd|phdHtm|217252.60127MKFFLDTANVEEIKKYAELG
285MJ02301out7|ali|phd|phdHtm|879918.3145LFVGEIMPMGFGVHYVGSEG
286MJ02601out7|ali|phd|phdHtm|203060.53189LVVLFLIWSHVNVVVSDSMY
287MJ08531out7|ali|phd|phdHtm|84595.0172MSEDEKLPQVIMDPADYEAL
288MJ08521out4|ali|phd|phdHtm|689911.5164MGVEVSNKPNVSSIQSYVED
289MJ02691out3|ali|phd|phdHtm|178878.51139MIEIRFHGRGGQGAVTAAQI
290MJ05441out3|ali|phd|phdHtm|229344.00147MIAIIPAFNEEKNILKVLKD
291MJ05461unk3|ali|phd|phdHtm|56090.0018MILYIIVAISILLNIILGIK
292MJ01851out2|ali|phd|phdHtm|499916.5338MCYGIIVMILFSLYKGLAPN
293MJ08131out2|ali|phd|phdHtm|249242.72121MLYVVGIGSGNERHFTKEAE
294MJ13711out2|ali|phd|phdHtm|244949.77210VIIMYAIGIGDNKEEVLKAY
295MJ15761unk2|ali|phd|phdHtm|189090.0025MLMLLLIIVGLILALIVLGI
296MJ00681out1|ali|phd|phdHtm|115797.9875MPNYHVTLQAAYIVRNVDDV
297MJ01631unk1|ali|phd|phdHtm|187070.0020MDAIIIFLILFIVGVLIGVG
298MJ02191out1|ali|phd|phdHtm|3999516.0050MAMDIETLLDLEKLYSAIMT
299MJ05211out1|ali|phd|phdHtm|69494.5842VKNMDEERKYGLYSLIIGLL
300MJ05251out1|ali|phd|phdHtm|539912.5037MLNVEVPTIGVSLIFLAYDE
301MJ06211out1|ali|phd|phdHtm|172979.05153MKACERLLLKIESQEKFVEE
302MJ07011out1|ali|phd|phdHtm|414334.00124VIIMLSEYLEEFKEYLERFK
303MJ08161out1|ali|phd|phdHtm|297030.00152MQDKQLLQLKEQIINDIKKR
304MJ08501out1|ali|phd|phdHtm|1039910.0098MATYVFIDQNIPLVYTVETG
305MJ08511unk1|ali|phd|phdHtm|245050.00245MVMSMANKREPAPGWPIVSG
306MJ08981out1|ali|phd|phdHtm|1549916.0031VIYLASSAMSEIVMFVAVLL
307MJ10041out1|ali|phd|phdHtm|2149534.00202MKVRDLMDKNFAKIYVDETV
308MJ10721out1|ali|phd|phdHtm|116292.22107MIYFGGIMAIAYAKLYEIIA
309MJ10871out1|ali|phd|phdHtm|312030.00123MIIETPSKVILFGEHAVVYG
310MJ11401out1|ali|phd|phdHtm|257141.7167LLSFQQVVKIHLILRCLSPQ
311MJ12801out1|ali|phd|phdHtm|1579936.0025MNLILTLLIIFAIIGLLILI
312MJ13951out1|ali|phd|phdHtm|1329932.44123MDVNVSYKDTYSVITYQVWE
313MJ14571out1|ali|phd|phdHtm|1359920.0027VMVMTALTLLILFFGLAFIL
314MJ14831out1|ali|phd|phdHtm|152182.0028LINMDKTLSVIVFLISLIII
315MJ15581out1|ali|phd|phdHtm|90797.6453MSRVVVSVIGQDRTGIVAGI
316MJ15611out1|ali|phd|phdHtm|5539237.45542MITNKIKIFLISLIFISGVY
317MJ15881out1|ali|phd|phdHtm|1129915.2995MVGNAYTLFEGNSADDLYKA
318MJECL441out1|ali|phd|phdHtm|331535.95288LFIKWGDRLMTKTLHLTKVT

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