--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in human Chromosome 22 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 82 c22000501 1 in 240 834 9 1 -10.68 98 MVLRAGGLLQAPVAIGAQSP NYFGVYTRITGVISWIQQVV 83 c22000213 1 in 177 270 9 4 -9.56 118 MAWNPLLLLFLSHCTGSLSQ PACGFCCCSFPHGSKGIQGP 84 c22000584 1 in 24 80 3 9 -3.68 34 MRILVNLLLDTLPMLGNVLL ALSRLQKESWREDAEDVLGL 85 c22000360 1 in 11 295 7 6 -7.20 288 MCRLWEVSLAGMPALLVSLA ITIIITIIIITITIIIIIIV 86 c22000598 1 in 11 1490 3 0 -4.00 986 MPLKKEAMNLRGGKGGHRSD LKEGVRDMLVKHHLFSWDVD 87 c22000689 1 in 10 143 1 9 -1.55 61 MQKTWPFSLLLSLALQSLKQ HTLRGDAHSPPLMTFQSSSA 88 c22000302 1 in 9 568 0 1 -0.60 28 MARGYGATVSLVLLGLGLAL QEGACVYAVSDLRKSGEAAG 89 c22000688 1 in 6 238 1 4 -1.00 230 MTSWVSSSPSPPLSPSSLSH IIIIIIIITTGTKTVLEVPP 90 c22000560 1 in 5 791 9 2 -12.00 596 MELSAVGERVFAAESIIKRR DRIDRLEAAPRVFLKPTMGL 91 c22000403 1 in 3 41 5 9 -5.00 30 MAAPKGLLLVALVLLLASCK MLKDFLLVALAFTGVTLLLL 92 c22000172 1 in 2 292 6 6 -6.00 252 MAATQELLLQLQKDNRDGRQ RRLRYTLSPLLELRANGLLP 93 c22000799 1 in 2 64 0 9 -0.27 49 MQDAPSMGQASEAVPGLVAW GGGVFVITSRLLSQGDPISS 94 c22000087 1 in 1 212 4 6 -4.00 201 MASSRASSCSLSKAPSAWPR PALAGGSFRAVASAWVPLTM 95 c22000097 1 in 1 105 0 9 -0.11 61 MSLCARAEGPPPCAWGFWAV CRTLTTLLSLIFPYACSRGV 96 c22000110 1 in 1 55 9 9 -11.70 36 MPRSPGTRLKPAKYIPVATA TKTQWSSQLEGPGQATPRAR 97 c22000112 1 in 1 230 3 6 -3.50 190 MGGALASPRVALSQLQCGLL WKLRALLDPFLRLKVDGFLP 98 c22000142 1 in 1 373 4 3 -4.24 339 MCRATLGLPLPPIVIQPARR RRLRYTLSPLLELRANGLLP 99 c22000372 1 in 1 1057 3 1 -4.00 310 MPFLRPCVLLLQESKPLAWS REPELRRNSYLEIGNCMETP 100 c22000465 1 in 1 202 4 7 -4.00 177 MTAKGLAMFSCLSVPVQEAA FMTPFQTLQSNYFCHIFGLF 101 c22000556 1 in 1 755 4 1 -4.00 269 MKDKDKETENWEACGKRPGR NWGHPEYTCIYRFRVHGEPA 102 c22000712 1 in 1 351 4 4 -4.11 294 MPPLWALLALGCLRFGSAVN TSVNRGPPLDRAEVYSSKLQ 103 c22000782 1 in 1 63 6 9 -6.82 40 MDAAWFLPESSPCLLLKAPD CSEVEQIQAVVNNGFELTIM 104 c22000050 1 out 79 1120 5 1 5.26 1082 MLSKAYKYSSPKFRHGKAVG GPTNWGRAGAAGHLLIYSKS 105 c22000491 1 out 57 735 8 1 8.00 399 MWDGAPEVGPSSSCLSLSLS AGSMCREATGPISKSAGFEA 106 c22000408 1 out 28 402 9 3 20.00 289 MDFSICISNITPADAGTYYC QLAPKPELSFSEYASIQVPR 107 c22000772 1 unk 11 71 0 9 0.00 21 MAMVMVVLPLPFLLLLLFLL PGNLKHRQNPSDGSKVSKTI 108 c22000405 1 out 10 76 9 9 11.42 38 MSNTAQGSNIFERMEVVAVL IYKKAPSKELLRFFYEHWFG 109 c22000134 1 out 7 89 2 9 2.23 74 MQMNPVLWEAGPHPECHVRV CALLFTLGYALYSLAMMLLT 110 c22000422 1 unk 5 231 0 4 0.00 231 MASKGPSASASPENSSAGGP QFLSRLFLFVALVIMFWLLI 111 c22000630 1 out 5 1040 9 1 10.64 418 MDDSGELGGLETMETLTELG SCNDCQQMIVKLGGGTAIAA 112 c22000439 1 out 4 468 0 3 0.60 94 MPLGRPRGTFACPDLPLQTT PEMAKERYEDYLCIGIYPWA 113 c22000494 1 out 4 934 6 1 6.00 496 MVLAQGLLSMALLALCWERS LKQQDYLSLPPWEVNKPGEV 114 c22000055 1 out 3 110 4 9 4.32 32 MAQDYGAWVTWFLLGLGLGL AATPGCAPPLLGRTYRDATP 115 c22000103 1 out 3 271 8 6 8.00 34 MPEAPPLLLAAVLLGLVLLV REVVDGLEKAIYKGPGSEAG 116 c22000502 1 out 3 537 3 2 4.00 250 MAAPALSWRLPLLILLLPLA LNTDAYLSLQELQGQDPTHL 117 c22000225 1 out 2 101 9 9 16.56 22 MVGLVLLGLGLALAVIVLAV AATPGCAPPLLRRTCRDATP 118 c22000662 1 out 2 134 6 9 6.33 127 MEVLGMTDSEEDLDPMEDFD LLLLLALLLPLLSGGLHLLL 119 c22000701 1 out 2 57 0 9 0.85 45 MPFQVWRAACASLAAAPSYG HTGPPTVTLASATRLALANG 120 c22000838 1 out 2 240 9 6 10.35 80 MAVPQQLGHNPLHHHPKLRP VWGASRVLREPSLSSFLCKG 121 c22000022 1 out 1 246 8 5 8.00 137 MYRDKLLPDRSASHNPMYQK IPTLSTRTFGSNTQNRKRQL 122 c22000041 1 out 1 400 9 3 52.00 395 MKNHSPLTEGVQLDIASQSL GAAAVAILAVAIGVALALRK 123 c22000046 1 out 1 288 9 4 28.86 281 MALGTVFSLESEEEEYPGIT GAAAVAILAVAIGVALALRK 124 c22000301 1 out 1 916 9 1 28.36 905 MKPALLPWALLLLATALGPG LAVVAAVALVYVLLRRRKGN 125 c22000339 1 out 1 375 6 4 6.78 316 MTLPLLCPPSLNLSNSDILT LFSPNPVKPNYLANISILIA 126 c22000425 1 out 1 263 8 5 8.00 189 MLLAWVQAFLVSNMLLAEAY TPVDPQEGTTPLMGQAGTPG 127 c22000571 1 out 1 121 7 9 7.83 41 MANPASHWLSVSMLGACILW SLVGFRHDNSKVLELLLQAV 128 c22000577 1 out 1 463 9 2 9.19 45 MAGAGERKGKKDDNGIGTAI IDELGYTLYCSLSEPEVLLQ 129 c22000631 1 out 1 397 0 2 0.00 160 MARAGARGLLGGRRPPGLRL YGSAGRGSRYLRTNSKTEVT 130 c22000632 1 out 1 255 9 5 20.00 168 MASRCIIPCPGPPALDVGHS PATELGSTELVTTKTAGPEQ 131 c22000634 1 out 1 68 9 9 14.29 26 MPHFLDWFVPVYLVISVLIL DRDLRKTLMVRDNLAFGGPE 132 c22000645 1 out 1 259 4 4 4.95 200 MENQPVRWRALPGLPRPPGL PRSASSPKQHPSESVYTHTH 133 c22000730 1 out 1 74 6 9 6.55 40 MHPAKTGLTDSLAFGGGLPG TYGCHGSGQLSKQVPVVSSA 134 c22000743 1 out 1 286 6 4 6.49 75 MQSDPAVVSAKASGYDGQSN SKSDGGAHKPLLSVLPSRAH 135 c22000755 1 out 1 291 8 4 8.00 187 MMAASSTVYGAQHPPFDPLL GPNTDLARGVSFQRWPMHLL 136 c22000765 1 out 1 187 0 7 0.42 163 MLGLAVGLPALLPHTGLGGR GIDLTTTILGARSAGSDSRF 137 c22000767 1 out 1 79 3 9 3.74 44 MQEGPVGALLCSWAPGVGLS LLAEAYRLKFAFADAPNHYK 138 c22000787 1 out 1 310 9 6 24.00 31 MLCVCVCVCVCVCVVGWLGA NVDPGEVSGASTTAPLPSGF 139 c22000818 1 out 1 40 0 9 0.00 35 MLASAGFSLTSPGLMWTLGL LGLKSHPFNYVVSEKQMWAL 140 c22000822 1 out 1 70 9 9 13.16 32 MHTFALSLSVSLSLSLSLSL GEVDRPPPVPTPGDRAKFHA