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Transmembrane helices for helpy (Helicobacter pylori)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1hpa1234299_i17out6|ali|phd|phdHtm|69700-0.5337,62,118,140,192,220,248,286,311,352, 396,468,490,540,575,602,671 MIKQSLNGEDMQKSLVSLAW
2hpa0386015_n14in16|ali|phd|phdHtm|93650-5.2030,70,101,327,359,554,653,686,718,782, 826,859,890,925 MKNLKSLLSFLLASFWVAIP
3hpa1342970_n14out426|ali|phd|phdHtm|61200-0.5853,101,133,155,196,226,265,291,345,393, 426,471,509,606 MQYSSLLSVVLFLPLIGAIY
4hpa0150342_n14out7|ali|phd|phdHtm|549808.5736,58,90,129,151,177,214,240,266,313, 381,419,449,541 MEFYQVYDPLGHIWLSALVA
5hpa1344812_n13in54|ali|phd|phdHtm|51220-2.3926,50,99,138,179,226,259,291,319,343, 386,423,472 MQFLHAHLLSVVIFFPMLSA
6hpa0152144_n13in6|ali|phd|phdHtm|51980-8.6729,59,98,120,148,182,209,236,282,353, 390,420,511 MVFKLKGYTAAFLSVALSAV
7hpa1346337_n13in4|ali|phd|phdHtm|49022-2.3338,64,96,141,186,227,266,297,326,348, 405,436,482 MLIDSLHVSFDSFNFESILP
8hpa0056227_i13out27|ali|phd|phdHtm|496808.1428,65,92,149,187,211,253,296,341,390, 418,444,472 MGHVVLSTPIVTMFIVYSLL
9hpa1079833_n12in44|ali|phd|phdHtm|51990-10.0487,110,161,191,222,267,309,356,410,436, 481,504 MLLIVFFKFYFQYSIKKKSF
10hpa0156334_n12in10|ali|phd|phdHtm|48891-11.6238,81,117,154,184,238,268,300,336,379, 414,465 MQENVPLSYDYSISKLFLYA
11hpa0935332_n12in5|ali|phd|phdHtm|48690-10.6046,68,104,141,167,197,266,300,340,378, 422,470 MLKKIFLTNSLGILCSRIFG
12hpa1254328_i12in5|ali|phd|phdHtm|39192-14.4636,71,109,131,160,188,229,266,296,318, 357,384 MMITKQSYQKFALMRVFVFS
13hpa1006713_n12in2|ali|phd|phdHtm|48010-1.3926,76,118,165,206,260,284,320,369,394, 435,464 MVVFTKRVALSLFVGILVSA
14hpa1240476_i12in2|ali|phd|phdHtm|40791-9.3429,62,103,125,159,200,246,283,317,339, 366,397 MQKTSNTLALGSLTALFFLM
15hpa1252788_i12in1|ali|phd|phdHtm|45982-8.4136,78,114,159,191,213,265,294,335,383, 413,436 MLIKKIDLHKDPIRKLFFYY
16hpa1247918_i12out11|ali|phd|phdHtm|418404.3924,52,74,123,152,186,215,276,308,330, 373,413 MIFSSLFSVVGMAVLFLIAW
17hpa0222220_n12out8|ali|phd|phdHtm|55200-0.6748,95,131,171,261,306,355,386,457,479, 509,545 MENHSHANTHTDTRTDDKST
18hpa1241828_i12out7|ali|phd|phdHtm|435717.0840,72,117,151,192,214,259,311,348,370, 405,435 MGFFKLKEHNTNIATEFRAG
19hpa0743083_n12out2|ali|phd|phdHtm|454505.8540,76,122,156,209,272,296,324,373,395, 425,451 MFLLRHLTSACVFLASKCLP
20hpa0492812_i12out1|ali|phd|phdHtm|416111.4723,45,71,111,133,168,196,242,296,318, 342,396 MENSTLYIVIAGLWLAVGFG
21hpa0317245_nf11in31|ali|phd|phdHtm|62010-1.4428,118,156,217,276,322,444,484,506,555, 605 MLSFIIKRILWAIPTLFGVS
22hpa0143597_i11in7|ali|phd|phdHtm|41391-12.3650,72,113,152,178,213,260,306,351,378, 412 MAQEKAVPRDPKKLNAFDLR
23hpa1631263_i11in5|ali|phd|phdHtm|44943-4.0751,96,133,164,193,217,249,335,367,404, 437 MGLKLKILRLSMNLKKTENA
24hpa1249488_n11in1|ali|phd|phdHtm|44382-8.1828,55,92,114,145,171,223,254,288,313, 378 MFKKIFPLALVSSLRFLGLF
25hpa1027105_i11out10|ali|phd|phdHtm|1020808.6832,367,406,454,487,540,880,904,928,977, 1009 MMLASIIEFSLRQRVIVIVG
26hpa0777602_n11out7|ali|phd|phdHtm|443323.5133,66,115,158,187,246,279,311,351,393, 438 MVDAFFQIAVLLFSLFLGAR
27hpa1002285_i11out7|ali|phd|phdHtm|4509212.4938,84,107,162,199,228,257,319,372,407, 432 METIDSVVRLLSNLVWGIPM
28hpa1388417_n11out7|ali|phd|phdHtm|1035606.7932,366,405,455,491,543,881,915,937,989, 1020 MIEKIIDLSVKNKLLTTLVT
29hpa0524081_n11out6|ali|phd|phdHtm|442222.8456,113,157,187,229,265,306,328,357,398, 438 MGKFSKLGFILATLGSSIGL
30hpa0237297_n11out5|ali|phd|phdHtm|390101.7046,88,114,138,169,191,238,287,324,346, 380 MRKKGMFEKIQKEWLSNIQK
31hpa0643460_n11out5|ali|phd|phdHtm|1028202.7230,357,389,445,471,532,874,898,920,973, 1004 MYKTAINRPITTLMFALAIV
32hpa1153676_n11out4|ali|phd|phdHtm|426212.4842,70,115,173,204,260,295,327,351,386, 417 MNPQTATKKPLKSLLAASSG
33hpa0328950_i11out2|ali|phd|phdHtm|3819111.0231,68,113,156,178,229,254,289,313,349, 371 MRVFVCFLGVFVSNGLARFG
34hpa0811424_n11out2|ali|phd|phdHtm|437202.1733,55,86,131,170,206,263,306,347,376, 434 MLENSSIWSNPAFVAIICMC
35hpa0812887_n11out2|ali|phd|phdHtm|388606.3056,95,124,161,183,208,239,278,315,344, 371 MLFYGINTILYTGTNAILSR
36hpa1229439_i11out2|ali|phd|phdHtm|386808.2931,53,104,150,176,234,268,290,312,350, 377 MLRKNILAYYGANFLLIIAQ
37hpa1251611_i11out1|ali|phd|phdHtm|383727.0623,45,75,119,159,198,246,283,312,346, 375 MHAEFFTFALIMLLIVMAPY
38hpa1616735_i10in463|ali|phd|phdHtm|41201-0.6561,112,146,173,211,272,313,336,369,399 MAEIKKAKNLGEWLDMRLGT
39hpa1371362_i10in39|ali|phd|phdHtm|42092-11.4228,78,124,157,189,221,276,316,374,396 MNKAIASKILITLGFLFLYR
40hpa1308086_n10in3|ali|phd|phdHtm|29893-19.2327,56,94,116,141,168,203,239,261,290 MRNTILFGVSMILLANLCFG
41hpa0996535_i10in1|ali|phd|phdHtm|38972-7.2233,72,120,152,206,242,272,302,332,372 MAHFGDRFGRKNMFMLSILL
42hpa1564524_i10out15|ali|phd|phdHtm|533111.8341,63,101,147,169,202,240,357,396,525 MEIKNIKEFEKASKKLQKDT
43hpa1578971_i10out9|ali|phd|phdHtm|394010.8444,75,105,127,168,228,257,291,313,385 MVLVLLLGRYVISKVKFLRD
44hpa0522742_n10out8|ali|phd|phdHtm|442727.9258,116,156,185,230,268,313,356,397,437 MGNHFSKLGFVLAALGSAIG

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