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Transmembrane helices for helpy (Helicobacter pylori)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
83hpa0318249_n6in29|ali|phd|phdHtm|28593-11.9435,107,146,168,220,268MESFREFIQQFKKNKAAVVG
84hpa0317245_n6in28|ali|phd|phdHtm|33494-11.6528,117,158,216,279,323MLSFIIKRILWAIPTLFGVS
85hpa1122276_n6in13|ali|phd|phdHtm|25394-11.5237,81,125,169,199,221MFEDLKPHLQELRKRLMVSV
86hpa0260364_i6in12|ali|phd|phdHtm|33293-11.9331,155,185,207,267,317MRILSFKKNKRAVFSLYLFI
87hpa1517906_n6in8|ali|phd|phdHtm|54710-1.7126,343,368,439,474,516MDKNNNNLRLILAIALSFLF
88hpa0074750_i6in5|ali|phd|phdHtm|19594-13.5920,51,93,121,161,189MLGLVLLYVGIVLISNGICG
89hpa0154717_i6in5|ali|phd|phdHtm|21561-6.3825,48,77,128,159,207MGRFSLKEILMLSLTLLALL
90hpa1135908_i6in4|ali|phd|phdHtm|30883-8.2370,110,173,203,253,297MANNASFYAAASMAYMLGAK
91hpa1628278_i6in4|ali|phd|phdHtm|32393-9.6840,158,182,204,264,287MELFKRTRILSFMRYSNYGV
92hpa0180661_i6in1|ali|phd|phdHtm|24263-6.1943,94,116,152,175,230MVLSLSILKKSFNDFLSTRM
93hpa0371920_i6in1|ali|phd|phdHtm|34590-10.3134,71,94,123,286,332MIKHYLFMAVSQVFFSFFLV
94hpa1045596_n6in1|ali|phd|phdHtm|20251-5.4124,46,100,123,168,192MNVLIRLCFIFLIGFFGANK
95hpa1471967_n6in1|ali|phd|phdHtm|29293-11.3559,122,164,209,231,265MRELFKSVRGFFRLLRMIFP
96hpa1486895_n6in1|ali|phd|phdHtm|27840-4.1433,62,93,143,165,193MEKRLKFLKFFANSVILDEK
97hpa1570781_n6in1|ali|phd|phdHtm|31883-8.5931,53,79,249,283,307MPDSANMIILFFTYDILFAL
98hpa0879966_i6out47|ali|phd|phdHtm|226848.4136,95,124,161,188,211MEHRVFTIANFFSSNHDFIT
99hpa1100927_n6out41|ali|phd|phdHtm|733212.0453,93,143,230,271,324MANERSKLAFKKTFPVFKRF
100hpa0999610_i6out23|ali|phd|phdHtm|237414.0255,98,125,168,190,227MSASPNLSLFFESLDLSKER
101hpa1236572_n6out6|ali|phd|phdHtm|21703-0.4343,75,101,142,171,204MALDWDFMFHSIPAFFKGLE
102hpa0275250_n6out4|ali|phd|phdHtm|2409612.5740,82,115,164,192,230MMFDNTLVNLFDTAPLLTSL
103hpa0772277_i6out4|ali|phd|phdHtm|210959.0725,59,85,133,169,200MFVVFIEGFGLAISLCAAVG
104hpa1536797_i6out4|ali|phd|phdHtm|377121.33150,185,229,288,333,371MKTEKQKFLEMRKDGANSVL
105hpa0427687_n6out3|ali|phd|phdHtm|623707.76249,305,340,383,405,427MRLLLWWVLVLSLFLNPLRA
106hpa0823280_i6out2|ali|phd|phdHtm|245212.2379,123,150,181,205,232MNFYQKIYTHKVVFSSLFFL
107hpa1391871_i6out2|ali|phd|phdHtm|228333.4634,63,85,152,177,217MHEFLKAFKDAFPHTISILL
108hpa0021155_i6out1|ali|phd|phdHtm|4729011.9532,54,89,120,151,177MMVVVLFCVNGALFLALGLI
109hpa0610345_i6out1|ali|phd|phdHtm|184050.6821,43,76,117,146,177MLISSSYTLSFIWLFLIFFF
110hpa1282579_n5in107|ali|phd|phdHtm|57871-7.3551,103,188,210,297MAKKKHKISTLKYFLRSLKQ
111hpa0224149_n5in13|ali|phd|phdHtm|18091-11.9230,56,98,120,173MVMASVIAYQKAHHSEAILP
112hpa0902875_n5in4|ali|phd|phdHtm|22754-5.4637,109,164,186,217MVFDRTISVREKKAAKTLGI
113hpa0267018_n5in3|ali|phd|phdHtm|34931-3.0118,118,291,313,341MMFIVAVLMLAFLIFVHELG
114hpa1581492_i5in2|ali|phd|phdHtm|45892-9.1437,83,157,199,334MLETSSHFLKSFRLKRYIGF
115hpa0200013_i5in1|ali|phd|phdHtm|25554-5.0153,97,145,186,226MQQEEIIEGYYGASKGLKKS
116hpa0608303_i5in1|ali|phd|phdHtm|67821-2.1534,85,112,159,202MKSLSNALFSLFLKGFYFTF
117hpa0680871_n5in1|ali|phd|phdHtm|22455-5.5340,80,149,175,199MDKMNKVVLHKEYSGFVRFF
118hpa0794733_n5in1|ali|phd|phdHtm|49311-1.5330,77,118,144,355MQSLSWLNLAFRWLFITGLG
119hpa1140089_i5out118|ali|phd|phdHtm|497808.4224,109,131,209,234MLKILPFLVILAYLGKSGGM
120hpa0495927_n5out9|ali|phd|phdHtm|224656.4532,66,104,161,215MDHEFLITMRLSFSLALITT
121hpa1237227_n5out4|ali|phd|phdHtm|223646.9139,72,99,167,209MGVLLELDNLKRLLEGFETT
122hpa0166660_n5out2|ali|phd|phdHtm|3189110.07162,200,230,275,307MLSRDIVQYSKIRTELYAYL
123hpa0605772_i5out2|ali|phd|phdHtm|217212.6118,58,111,149,203MKILALLIAIIGHEIMHGLS
124hpa1127979_i5out2|ali|phd|phdHtm|314000.8742,75,118,174,285MRLLFFSNPAIPLSTASFKC
125hpa1227534_i5out2|ali|phd|phdHtm|204646.5356,78,129,157,194MKIKTNQKRVFMQEALLRFQ
126hpa1656596_n5out2|ali|phd|phdHtm|2159610.1934,81,103,158,201MISQMLIQATLETLYMVFVA
127hpa0109704_n5out1|ali|phd|phdHtm|153525.0821,44,92,124,153MEAFIMLAISVALFFTEFRV
128hpa0656881_i5out1|ali|phd|phdHtm|1669611.9338,67,106,128,152MLSPATFKQITLALIASRLI
129hpa1559432_i5out1|ali|phd|phdHtm|2619317.8999,129,161,187,251MGRKVDLPFYYNAEYVLVGK
130hpa1649018_i5out1|ali|phd|phdHtm|147333.5429,56,86,111,136MLSLKQDSFFFLCLGILGFY
131hpa0822128_n4in15|ali|phd|phdHtm|35893-13.4651,105,163,203MAEEEKTELPSAKKIQKARE
132hpa1079196_n4in10|ali|phd|phdHtm|17957-5.2629,57,110,167MKVLKLLPNFLTILRIVLSL
133hpa1342045_n4in9|ali|phd|phdHtm|20796-17.6755,98,135,185MSKSLQKKNRKKKLQQTQKA
134hpa0804358_n4in8|ali|phd|phdHtm|27204-0.4830,167,218,261MGKFMNTLKKHLAFIIPLVA
135hpa1629258_i4in6|ali|phd|phdHtm|52542-4.19385,414,475,497MKLFNARLIVFIGALLLGVG
136hpa0195057_n4in4|ali|phd|phdHtm|17775-7.3436,75,124,164MLEKLIERVLFATRWLLAPL
137hpa0597296_i4in4|ali|phd|phdHtm|21573-7.2737,131,153,183MQALKSLLEVITKLQNLGGY
138hpa0292487_n4in3|ali|phd|phdHtm|52310-1.85137,243,282,318MALRVLLFFCFLFLQAEDKS
139hpa1105776_i4in2|ali|phd|phdHtm|37050-5.7620,57,86,326MLISIAFLLVLYLLNYSSFR
140hpa0117113_n4in1|ali|phd|phdHtm|18062-6.1431,64,106,134MLAPTATTSSGLTLLFKSLL
141hpa0212386_i4in1|ali|phd|phdHtm|15497-10.1755,84,113,136MSIGPLQMRLCPSSYKSPML
142hpa0273069_i4in1|ali|phd|phdHtm|22092-9.0776,104,152,188MSAESLIVILWCVSKVSFNP
143hpa0297484_n4in1|ali|phd|phdHtm|15765-6.5028,79,109,154MKKFGLGVYLLLLGILGGSL
144hpa0909241_n4in1|ali|phd|phdHtm|36460-6.5429,79,113,164MEFYKKQTLIIVSFCLSLLI
145hpa0990266_n4in1|ali|phd|phdHtm|32664-6.8154,92,215,247MRARCSKKSSMRKEKIMTNF
146hpa1408590_i4in1|ali|phd|phdHtm|38750-5.7732,81,307,329MGFLFEKSLMSFFAHPIKIL
147hpa1627930_i4in1|ali|phd|phdHtm|11291-11.1123,46,74,100MDWGRVVHVLFSLISLTTIA
148hpa1574413_n4out10|ali|phd|phdHtm|145787.9428,71,113,143MDAIYPYVLVVHLLCAIIFI
149hpa1563071_i4out7|ali|phd|phdHtm|449919.0536,89,131,171MGRNQGAYLDPSESILMLMV
150hpa0635340_i4out6|ali|phd|phdHtm|593424.7052,90,183,288MQTPMDTIKSIPLRTFILLY
151hpa0554816_n4out3|ali|phd|phdHtm|15204-0.6744,68,91,135MFHTSLATTPLTIPVRVAST
152hpa1078693_n4out3|ali|phd|phdHtm|168747.4942,78,127,156VLFIVSSGAKSFQISNLFNN
153hpa0720190_n4out2|ali|phd|phdHtm|338212.62123,175,215,314MGDRFVCRTNYLESFFTTKK
154hpa1557289_i4out2|ali|phd|phdHtm|148949.4431,80,104,147MGFLNGYFLWVKAFHVIAVI
155hpa1658883_i4out2|ali|phd|phdHtm|220212.0438,74,157,187MLFNGLCLFEQASLCFRKAS
156hpa0383775_i4out1|ali|phd|phdHtm|1439529.5540,77,100,143MLEMSLQALNTQDSSVMAQS
157hpa0550220_i4out1|ali|phd|phdHtm|7489016.5235,93,162,533MEDFLYNTLYFIEDYKLVVI
158hpa0628313_n4out1|ali|phd|phdHtm|490424.2831,69,129,162MDKETRFYNLFSLAILGILI
159hpa0741083_i4out1|ali|phd|phdHtm|134141.8224,56,97,123MSLRFILTFLRLFLIAMLGH
160hpa0857291_i4out1|ali|phd|phdHtm|279242.5242,105,183,248MRVIIEFMLISLKTFLKILL
161hpa1035329_i4out1|ali|phd|phdHtm|155191.7641,69,92,129MRVMWLAKIAFLCPGEQFLH
162hpa1301104_n4out1|ali|phd|phdHtm|130030.4023,56,83,121MNFVFLWAALGGAIGSSLRY

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