--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Helicobacter pylori --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 14 hpa1010691_i 2 in 22 289 3 0 -3.12 139,229 MGFADFFKNFKINKLRTAPS DLKKTLSDLIAMMTHKTSKI 15 hpa0867640_n 2 in 13 241 5 3 -5.41 41,190 MLEDVGEEGQLKLLKSSVLV KNPECRVCGTHKITHLQDYE 16 hpa0895980_i 2 in 6 273 3 0 -3.67 49,215 MDFCKIKEILRRLVVLKELR YFLDALSLPIELENSLIKEE 17 hpa0426171_n 2 in 4 101 9 1 -11.47 69,91 MSVWYCLKSVSLSWLFISQE GIFIRVNVLKHSSSLSLIEK 18 hpa0503431_i 2 in 2 162 9 6 -10.11 20,92 MGFIAFISAFLLPNLSMIAP STTLSPTSIALNPAIATISP 19 hpa0080576_i 2 in 1 114 2 2 -2.54 34,86 MFLSSLGSLGIRSCLMAVSR SSYRLRMEESFSARMDMRDY 20 hpa0103236_n 2 in 1 128 5 5 -5.68 37,59 MRPKFTELATLNFNWHAFKA LENKLAKGCNAMSLNAKLGP 21 hpa0424588_n 2 in 1 105 4 5 -4.80 33,77 VPLLILAVFLKNYAQKLENS RASDCGPEGRGFDSHLPPHL 22 hpa0432852_n 2 in 1 335 3 0 -4.00 118,320 MRLGVNEAVELSLGELQNTP SSHHLESLLNPPFFKKTPTL 23 hpa0489006_i 2 in 1 495 6 0 -6.39 305,443 MSVLKLHVKVFRFETNKDYN MGEKNTQALGLDAHYHKVTF 24 hpa0533833_n 2 in 1 458 2 0 -2.13 24,184 MFKRNFMLRLLIGLLLMSFI HQERDEKELEERRKALEAGK 25 hpa0916846_i 2 in 1 218 4 1 -4.24 51,193 MSIKENLEQVRNEFKSDEKL DIQQNPSKPTNLKKETIQGT 26 hpa0955557_i 2 in 1 223 3 2 -3.21 31,127 MQGLWIYPEDTEVLGVACKS KKAKKQIKKVVLPESEKMKG 27 hpa1538062_n 2 in 1 231 3 1 -3.51 22,196 MFKKIIFFGVFLMGGFVIPP LSSSKRFETSPLFYAAYSYK 28 hpa1577242_i 2 in 1 238 7 2 -7.99 55,114 MDRKLLRLYQPLNAYSYNSD TKEVLSIYQTCNTYSIKALL 29 hpa0602184_i 2 out 23 496 0 0 -0.91 306,380 MLKIKLEKTTFENAKAECSL GASGAGVRACTAFVEELLKK 30 hpa0095194_i 2 out 6 231 1 1 1.37 66,196 MVQKIGILGAMREEITPILE AFLEKSAQTSAKFLKSMVDE 31 hpa0224692_n 2 out 3 368 8 0 8.00 103,227 MVVLGSTGSIGKNALKIAKK LEEVLELDKEVRERFKNVAG 32 hpa1126655_n 2 out 2 329 1 2 1.42 215,291 MYYEFFFIFPKERELFESFL LEQRQRNEWVALKLLKKQPI 33 hpa0338453_n 2 out 1 106 3 2 3.23 32,81 MASNSCALGESCVFSCFSSL SSFSSSLTSSFSSSLTSSFS 34 hpa0417251_n 2 out 1 368 8 2 8.00 197,292 MGMLLKECQEKLKRSLNLSA HSINDIDYLLDSLKKAVKKL 35 hpa1166389_i 2 out 1 431 6 2 6.43 42,409 MTSASSHSFKEQDFHIPIAF LLKLHALAKKILIQLKLLKK 36 hpa1190766_i 2 out 1 417 4 2 5.00 141,166 MRYLWLFLIHTIGLFATDKT LDYNQSFLFPLKNVKIQAFD