--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Helicobacter pylori --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 207 hpa1342665_n 2 in 33 100 9 9 -9.43 36,81 MIGLNHYLIVSGLLFCIGLA VILWFKKFKSLDIDSLNAMK 208 hpa0734363_n 2 in 23 146 9 9 -9.31 109,132 MEPSLKKAYDTGIKPYMDKK FILVDGFNLLTENLVASFKM 209 hpa0086659_i 2 in 20 689 5 2 -5.57 44,338 MYNNRSLSIRFKRANGMKST VSTKIDGISQDILEDVSRKK 210 hpa0109028_i 2 in 16 565 2 2 -2.51 32,231 MMFSSMFASLGTRIMLVVLA IATHVSGTTMNLDKQVNLFK 211 hpa0752106_n 2 in 5 128 8 9 -8.44 69,123 MSDFEVPPKAKGFKRLFKAL LIGLIFWTLIWGRYLLALYL 212 hpa1507004_i 2 in 5 292 6 2 -6.31 32,150 MWSFIQKIFKALIIAPLDFI KATQSATNIITQAFGYQLLM 213 hpa0475826_n 2 in 4 87 9 0 -11.25 46,68 MQLVGISVSNLKEISSKEKF DISDILIAHSKIKTKANSFY 214 hpa0868522_n 2 in 4 210 9 3 -13.13 123,154 MTGTHARYVKAAYKEIKIVF LENKLLNYIAPGEPKKSQFE 215 hpa0188159_n 2 in 3 170 9 1 -10.94 31,54 MTNLIGFLLVLASIWVFFLA MLDPKANQTPPNPTPSNKEP 216 hpa0554209_i 2 in 3 1927 6 0 -6.00 362,1816 MNEENDKLETSKKAQQDSPQ QSTKTLSREHEEITTSPKGG 217 hpa1330805_n 2 in 3 199 4 5 -4.95 23,68 MTSALLGLQIVLAVLIVVVV QKPKTHATQTNAHTNQKKDE 218 hpa1403906_i 2 in 3 318 8 4 -8.14 276,310 MVNVFFKQQKFVIKKRFNDF LIVMAISTILPVIYFKKKGW 219 hpa0628139_n 2 in 2 54 5 7 -5.15 22,45 MEFLGLILSLAAILIAFKKP WLVELIIFIAHSSSVLPNMN 220 hpa0735569_n 2 in 2 143 3 1 -3.10 56,90 MLWGDKTAAVVRIPYPIFHR IHCHKTHAHIKSLLNFIGID 221 hpa1094415_i 2 in 2 104 9 9 -12.42 26,53 MKVQNFIHFSVVVGFFLGLV REKEVASILEYIRSYDFDDG 222 hpa1138899_i 2 in 2 189 6 4 -6.60 23,58 MKKIAFFIFVILFSVGIYLI QANEVLLIDRDEWVRFLNEK 223 hpa0013983_n 2 in 1 87 9 0 -26.25 52,74 MIILSASVKNLREISVKEKF DIADIIVAKSKIKTKTKCYR 224 hpa0028901_n 2 in 1 177 9 8 -13.00 29,166 MKLIKFVRNVVLFILTAIFL LLMGFFISARSVCTLFKSKA 225 hpa0350068_n 2 in 1 188 9 7 -19.01 57,94 MSKENSVISGLMNFFSEKNE VTEEIISKKLEELKAKNNKG 226 hpa0393770_n 2 in 1 174 4 9 -4.99 108,167 MPHSFKKRFLIIYTLSTLLL YAFLGASLFVALIARWLYKI 227 hpa0403956_i 2 in 1 252 4 0 -4.29 56,155 MLETYALKNGAVFISDAHFL YEQSLFKVSSSVLEPSQNKD 228 hpa0435098_n 2 in 1 389 2 1 -2.00 148,306 MVIVLVVDSFKDTSNGTSMT KVYEEAIRDFKNNPHLFKTL 229 hpa0461752_i 2 in 1 88 9 9 -9.30 48,74 MALHIVCVESINIREISKRE DITAILHALFTLRTGARNYY 230 hpa0528756_i 2 in 1 119 5 9 -5.58 61,107 MPHPKAVIMFLISSDFRIFD FAASRALLAMILASLGFSSK 231 hpa0590627_i 2 in 1 145 9 8 -20.39 43,129 MVTHEKIKSRFSRNWSLRNR LLVGCVIQKIFFGKYWVDRY 232 hpa0613267_n 2 in 1 110 1 1 -1.35 46,92 MRPISLKLFLMKSFSAVPKS FFSSTTFFSSTFSTFLRALC 233 hpa0613981_i 2 in 1 293 7 3 -7.00 122,206 MRLLFLLLSAAFMLLAEEKI IKEAENNIKNSKLGNLYAGK 234 hpa0731081_n 2 in 1 115 9 6 -9.44 64,99 MRPFSSAFSKYSFKCLYPVK LVMSKGSMRPFRLTTVIKIF 235 hpa0749862_i 2 in 1 163 1 6 -1.64 37,160 MLSIFKTVFQSKFPSTKFLI PHAVFILTHHCAINLVSVFW 236 hpa0760338_i 2 in 1 100 9 9 -16.67 61,85 MPIIKKPIHSKTKPLACHIK TIQTGLSKLIISPYINTITF 237 hpa1009202_i 2 in 1 337 9 4 -20.69 22,61 MRFYIIFTFLFIVGFGVFVY LNAYMDLKQEHKKAYKLEAF 238 hpa1047362_i 2 in 1 153 9 8 -18.32 65,98 MWLASRAFLMRSMSSLRTLK MSPFLKGCKIIRIIPPAMLE 239 hpa1080513_i 2 in 1 109 9 2 -21.32 67,89 MPIKGKLMRSKTLTKGLCVI LGKNPLSPKWKLSKIEPNPC 240 hpa1086218_i 2 in 1 416 5 2 -5.50 33,347 MQYKKNKKRYYYLALGIFFL SKATRKSLGNSSFVFFGKFL 241 hpa1087959_i 2 in 1 137 6 2 -6.10 53,103 MRNFCIALVLGGMVRVKVLC VMSKFSGAKLEKLKPEKPCE 242 hpa1160127_n 2 in 1 168 8 0 -8.51 56,162 MASKAQLERKVTSMIGIPPS IALGTFPLAPLMRPSVTSAT 243 hpa1266560_n 2 in 1 131 9 7 -11.43 99,121 MTASNKVCTPLFLKEEPQSI IGILIGTGLAFKRSLIWFST 244 hpa1358995_i 2 in 1 459 7 1 -7.85 76,374 MVATIAKIPLIQKIPVIRRF PHLLKEDAPSNTNETTYFER 245 hpa1589054_i 2 in 1 115 2 9 -2.29 56,104 MQSMFSLFNSLLIALMRTPL LMLSPTLKLSPLMRWRMERT 246 hpa1590112_i 2 in 1 179 9 8 -14.12 38,77 MEKLFEKILHEMRSRTSFLL LRAIKKYHKIAFKSVYWQQN 247 hpa1288091_i 2 out 66 105 5 9 5.32 49,98 MKFLALFFLALVGVAFAHDG AQVIYTLVFAIIAIYSNPFL 248 hpa0158742_n 2 out 32 286 2 4 2.94 27,82 MDFLNDHINVFGLIAALVIL SFKYKNFSDLQVKALLNLSN 249 hpa1489411_i 2 out 16 88 0 9 -0.01 36,71 MESQLMKLAIETYKITLMIS MTNMLLDYTKTLIKLIPKII 250 hpa0734056_n 2 out 14 105 1 6 1.75 70,104 LRFFIFLILICPLICPLMSA TPPHSNFSLALFDIDFFHHG 251 hpa0412039_i 2 out 13 395 1 1 1.96 206,368 MGEDCLSSLEIAQNLGAKVE ISFPQFKHLLNQFKKGSLNG 252 hpa0862320_n 2 out 6 128 6 1 6.92 40,71 MREISEFKISPHFPIRIAKI SYMLTQHSSRSPVSVKQHLV 253 hpa0657398_i 2 out 3 79 0 9 -0.75 35,72 VGAILSILKLEIKSYLTNTS LLIISSAIFGLTQAITSLRI 254 hpa0325014_n 2 out 2 90 2 9 2.64 39,66 VNFLKKPKYYKFIEGANYLS NMQKDYEELAKDPKYTQNKT 255 hpa0572739_i 2 out 2 370 2 2 2.21 52,230 MAGTQAIYESSSAGFLSEIS KLKGQKDSYLTERVQTKIIV 256 hpa0817776_i 2 out 2 428 4 1 4.00 19,163 MPLPFIIAAGVALVAAGYGV VCNALQEANHMDKSFRVILK 257 hpa0000317_n 2 out 1 100 9 4 13.40 29,82 MHSLMMIGFCVGVKPISYAP FLISSLPLSNAYNNSTTAPL 258 hpa0118826_i 2 out 1 276 1 4 1.26 157,227 MVIDEIFQIMMLRRIKVGSN LCVGKLECDYEGFFQTISEE 259 hpa0126861_n 2 out 1 308 0 0 0.00 109,204 MAKENPPIVFGPVLSRRFGK LLNHKQITIKKVGSLEFYCA 260 hpa0258179_n 2 out 1 179 9 9 45.65 46,75 MASLAFIQAFLESFKGFLSQ FFIDNYPYSKTAPYQVSLFC 261 hpa0304343_n 2 out 1 122 4 2 4.35 52,85 MFLCKIPLSLTPMEARSLLT LAPKARMALLLIMRQITRQS 262 hpa0418322_i 2 out 1 159 3 3 3.98 71,142 MFSFLKAEIVSSLAPMTLSC KFFLKNSFSLTQFFNCFFQA 263 hpa0456083_i 2 out 1 366 1 0 1.29 185,363 MSKRSEVLEQFHGGLKNLEL VTEIAIVNYPTAKAIGLFLA 264 hpa0456716_n 2 out 1 103 0 9 0.61 54,100 MIDNACISHFFKKHCRGNTF SVLIFFFKFCVVVCFKIFFV 265 hpa0462019_i 2 out 1 100 5 9 5.18 65,93 MKTKHKGIRMFKQIRRMMSL VGIIIITAAISNAKTLSQWL 266 hpa0567230_n 2 out 1 103 9 9 17.68 28,91 MFLILSNPFFNTSAIKFLIL SSCLFGSLMRVLVGSISQWH 267 hpa0578743_i 2 out 1 115 7 9 7.66 61,101 MKFFTRITDSYKKVVVTLGL GGIIYLSTKFGFNIGESGGA 268 hpa0677343_n 2 out 1 115 4 0 4.07 56,113 MQMQIHNIHTHPFKKFTRII KDFLHFLSMFIAFIHDRSIH 269 hpa0678839_i 2 out 1 151 5 2 5.24 64,91 MKPASRGSLPLIMVSSPLKS PAPMGQEVCELKRSLEQLLK 270 hpa0887696_i 2 out 1 115 6 1 6.36 73,99 MIVKIMRVVSLAGFEPTTLR AFLLCGFKFAKTDQLHAFTL 271 hpa0891994_i 2 out 1 114 2 2 2.35 52,99 MMKKSSNSRAKWLSSLGIIT LFWTNFLKNGTTLPRLPTTL 272 hpa1108600_i 2 out 1 126 0 9 0.88 34,112 MDFKSLLMIFPLLVLGKPGT SVRPIIVMYPFSSTIAPSPE 273 hpa1112335_n 2 out 1 100 9 9 23.81 55,94 MANHFRGVFCRGRLVFKSVD RIFSGLIGLYLFFNAIHNVF 274 hpa1214108_n 2 out 1 100 9 1 12.77 63,98 MPKAIPPLESLSNLLNTTPL CASLALFKALLAISFTLLFS 275 hpa1332677_n 2 out 1 115 9 9 9.24 48,94 MIYTPMLYIMTYAILGSAKD FKFFLHDKLSGTHIETIKEA 276 hpa1425798_i 2 out 1 370 3 1 4.00 149,291 MLVISVLAFNYEKNEKIKMI HSEPSLKGSFYENSFCVQFQ 277 hpa1497443_n 2 out 1 200 0 2 0.54 146,194 MVHNKPLEFKKSANILAFSK LMSRACWMISLAFKFLTKPP 278 hpa1565512_n 2 out 1 206 9 6 18.34 152,203 MSIKKNMAIKAPIKGEITQL SFWSFLEAFSNSLMFLISIS