--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Haemophilus influenzae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 HI0147 17 in 8 633 5 0 -5.79 47,76,121,156,191,233,277,318,372,395,441,463,496,541,570,592,624 MCRNGPTFPYSSSNGVSMKY TLVLITIFPQIITFVPNLLI 2 HI0561 16 out 6 633 0 0 0.05 27,64,90,147,174,196,247,298,331,363,396,440,501,539,585,627 MYLGLKVGVTFASSIPAAVI LIVFIVGIVIFASRVLRAKK 3 HI0020 15 in 5 479 8 0 -8.84 28,57,79,107,139,162,203,242,290,312,343,384,416,441,472 MALSKNTKLVILMAIPLITF LIIHLTIGMAWWKLLMSLGW 4 HI1015 14 in 6 488 4 0 -4.73 30,52,77,131,153,195,256,295,330,369,393,415,458,480 MFGLPIPIIGLLIAVFVLVF LFPVVVLASILFYIKLQNKN 5 HI0852 14 in 2 463 9 0 -11.60 30,67,96,121,147,176,214,242,290,316,346,368,414,448 MTTESNAYRGLAWVAAMALF ALVWSLMKLHKHDGDHLRKM 6 HI1218 14 in 1 532 2 1 -2.17 19,45,73,120,147,202,231,255,298,368,405,441,494,527 MLSFILSIFPIVLLIYLMVK IIYGIIAALGALFLVPLFYN 7 HI0608 14 out 9 461 9 0 11.88 31,60,102,140,162,190,229,268,307,333,371,393,424,456 MGEMASLRSHKNGIIFILDI FLLNLVCVVVIATMGYMFWL 8 HI0350 13 in 6 425 1 0 -1.66 34,64,101,123,165,191,242,264,290,312,351,383,409 MSNSLSSQIFTRKMLICAFT GMLCLFWVAPLKQENNKTSS 9 HI0936 13 out 24 635 1 0 1.71 60,112,145,191,227,293,329,374,411,444,469,503,623 MLPELGFFLLLLATASAFFL GILMAFGALFSVFGLRRKQE 10 HI1094 13 out 24 648 3 0 3.55 60,112,144,194,228,295,330,373,410,443,469,511,632 MIAELGNYALALSLAVSLML ALGGLLCMFDRRYRFNVLLK 11 HI1604 13 out 19 420 0 0 0.95 28,63,111,133,165,203,232,273,295,323,360,382,414 MEIISQYGSWLVWITAVFGF TLPAGAFFAIIIFYVLRTIF 12 HI0975 13 out 5 484 9 1 11.94 23,62,92,142,175,209,256,291,334,389,415,438,462 MNLGIILPLIIYLTFVFGAA LVGNKLGERRIEKTQLKVTA 13 HI0129 13 out 2 550 3 1 3.95 31,80,112,160,211,237,266,314,372,408,430,491,525 MQGDKFIIASLLCIILLIFF CDDGNYFVFRLDCRRYAYFP 14 HI1352 12 in 28 504 6 0 -6.78 25,88,145,183,208,255,297,345,395,424,447,481 MFGFDPSLITFTIYIFGMLL KPEQDILNTFDKAEKAYKEA 15 HI0895 12 in 16 1032 9 0 -10.43 36,359,389,411,457,486,548,873,895,927,978,1012 MYEEIRMKFTDIFIRRPVLA YSYVATEHKPLPVFDENKTT 16 HI1690 12 in 16 457 3 0 -3.34 37,64,123,174,206,249,287,326,348,373,414,454 MTTNNKQRQTWSSRLTYVMT FNYVKFVVPLIILVIFISNL 17 HI0418 12 in 11 447 9 2 -13.64 49,82,124,146,186,215,268,316,349,372,410,433 MCKPQQKHYGRQVMNTQNSL NAVLSLVGLWFISETKDKLL 18 HI0226 12 in 9 436 9 2 -11.75 28,58,95,137,166,211,246,297,337,361,386,426 MFSRKDIIVLGMMIFALFLG PTLVMLVASIFIGKALHKTH 19 HI1029 12 in 9 425 6 2 -6.22 27,69,114,161,188,234,256,289,331,360,382,416 MTVIIFLSVLLGTIILGVPV MLLLTFIFIPELILMPLQWI 20 HI0560 12 in 5 486 6 0 -6.12 46,102,151,187,216,250,292,331,353,393,439,478 MADGASAWIQTGKAAFQLPM LIVFIVGIVIFASRVLRAKK 21 HI1242 12 in 5 398 9 2 -17.79 29,65,99,121,152,180,239,268,307,329,362,384 MNQQKSTFIFILTLGILSML CVVISVLAYYFLTSRNLKSR 22 HI1706 12 in 5 669 9 1 -10.54 29,67,107,156,205,244,277,334,365,419,463,488 MTKRTSFNPLVIGVTLFFIL LSLLDDVGQELMAHEQTELA 23 HI0590 12 in 4 435 8 1 -8.87 31,54,111,143,168,206,246,292,340,371,406,428 MSAKSNKIGVVQLTILTMVN IVTFIGWTLYGFVSYKFDLK 24 HI0195_1 12 in 3 1111 9 0 -9.98 28,509,559,593,633,665,708,734,815,861,905,941 MIRKLMKIPPFFTALFASAM LDVFIKNNDTGEEIPFVDVK 25 HI0308 12 in 3 388 4 1 -4.83 30,59,92,114,147,173,231,258,299,321,345,374 MQVRPFYWLALSFLGYYCAY AAAAFFVIPRKLNAFLIVQH 26 HI1020 12 in 3 538 9 1 -12.46 36,80,115,157,217,262,311,354,393,423,483,528 MFSLFHHPQLRPRHYAGGVV LLCGILFAFIHTYRDADDLS 27 HI0610 12 in 2 428 9 2 -11.92 32,70,106,128,165,218,269,304,334,357,389,420 MNAKVLEKKFIVPFVLITSL LPLICFVVIAIYGFRAWKIL 28 HI1104 12 in 2 407 8 1 -8.11 35,67,105,127,153,179,246,279,308,332,368,394 MTNKVNSYGWKALIGSAVGY YVIDMLATIFLIPELKGKAL 29 HI1612 12 in 2 464 9 1 -13.28 34,74,117,151,185,213,269,301,341,372,411,441 MNFRLLSQYHADIKKLIKIS RMKKMQAMNDNAILQRLEKL 30 HI0594 12 in 1 509 6 0 -6.99 33,137,176,209,231,259,324,346,380,422,473,503 MDASKKKKTFNFPSAFTILF IGCLLLIGSILLVVQVSLYS 31 HI0125 12 out 10 438 5 1 5.83 43,77,121,154,196,218,259,311,348,370,404,436 MPTLEKTFELKQRGSTVRQE NVGTVIIAIVLVAFYAGGWA 32 HI0723 12 out 5 423 0 0 1.00 29,53,89,112,155,204,226,256,299,321,351,419 MRILSIIRIIGILVMCFSGT AFFIIFILVYWGCVFAVILC 33 HI0964 12 out 4 510 3 0 3.30 37,97,146,171,199,251,286,332,370,415,460,497 MTLLSRVLGLVRDVVIAHLI IVYGATLILLGVRKHHLLTK 34 HI1530 12 out 4 404 0 1 -0.61 26,56,87,117,139,179,237,266,302,327,360,396 MSYTFSTYETLALASLVLLL FIDLINAALLKVSFAVVNIL 35 HI0772 12 out 2 447 5 0 5.90 38,74,120,154,208,270,296,323,367,389,419,444 MISRVSRFMTTFVSKYLPDP GFCMTALIFTAPIFIIGLYF 36 HI0287 11 in 11 418 8 0 -8.16 25,54,104,151,175,212,250,308,357,379,409 MIQQKSPSLLGGAMIIAGTA GILNIVAQIGANLGWFASFT 37 HI0050 11 in 9 401 5 2 -5.27 47,89,138,164,214,236,268,312,341,363,393 MLLSASIMLYHLDMFDTQLI IIMMLIVFFPEIVIVPMNWL 38 HI0289 11 in 8 412 9 0 -13.17 46,68,110,149,175,210,259,305,351,377,411 MKSTEKLKWNKFDATWMLNL SNVFVTIMGLIAISAVVYGL 39 HI0225 11 in 5 400 1 3 -1.85 43,88,125,156,185,210,242,286,322,358,391 MNFLLCIFKGVYVIKLIQRF LGSTVSAILGYLFLKQTTKL 40 HI0325 11 in 5 450 3 0 -3.13 33,79,126,148,174,215,275,320,362,392,449 MLSNPVVISIIVLLALSLLR PTFIHYNIPLLVFGWIAAMY 41 HI0897 11 in 5 510 2 0 -2.85 33,75,115,163,187,255,295,328,357,389,500 MGNSAKKFPPIQGGALILLT MGFLGLLIVIWFAKPPFGTQ 42 HI1154 11 in 4 440 8 2 -8.01 18,48,86,122,195,239,277,300,354,383,411 MLLVNLAIFIAFLLLLAQLY TALNVNGAMVAGTITDRLLN 43 HI1728 11 in 4 397 9 0 -10.46 30,59,99,135,161,196,244,291,329,354,387 MASITHRRNAVLGAAFLMAT VIIMAILSGKTIISYISSFF 44 HI0061 11 in 3 788 5 0 -5.98 24,46,68,249,280,302,337,390,418,472,528 MKLNLITLVVLLIVADLTLL IQQARTKFSPWYARVIGLSK 45 HI0135 11 in 2 396 9 2 -9.04 34,70,108,130,160,186,229,264,313,357,383 MSLYLKAEKIQSWRVLIMAC GFIIFITTHLKYRHTFLLQN 46 HI1716 11 in 2 355 9 2 -25.11 21,58,81,113,146,175,198,229,257,309,332 MLSIFVTFLGAFLTLIVMRP AWRITRWVRRMKRRAKRLKK 47 HI0874 11 in 1 399 4 0 -4.72 30,52,81,106,129,166,191,227,347,376,398 MIQEKHLTFTINLLVSLFFL SFLAHNSGNIFYFSAMLCFI 48 HI1643 11 in 1 338 8 1 -8.73 25,49,85,112,144,174,196,235,272,299,331 MNTRPFYFGLIFIAIIAVLA LIYLWLVIGGFLVNYGISKL 49 HI0736 11 out 35 508 4 1 4.29 67,116,176,203,250,288,338,383,411,454,491 MAHSAPKAQKRETFSGRRAF FLSRLKWKSETKLTIDETKG 50 HI1109 11 out 27 375 8 0 8.10 31,64,97,126,177,216,241,289,320,343,366 MFKLKSVNLQVYIMLIAIAV IVKGGILLLAVWIDTSNKKK 51 HI0519 11 out 22 417 0 0 0.50 22,52,74,117,146,187,210,272,302,370,409 MSVLSSILGMVVLIAIAVLL LANLMSATIAGLFIGLGAAA 52 HI0746 11 out 12 440 4 2 4.71 23,68,117,157,188,251,283,315,354,385,436 MSAMFLLQFAIVLLCIFVGA PGLLSMFFCLLIGLGLSHVI 53 HI0883 11 out 11 456 9 1 12.54 33,82,106,162,199,228,265,320,368,403,430 MTIESILSAIDSFIWGAPLL ETKDYFQRLKINHYDQDEVI 54 HI0183 11 out 10 481 9 1 12.93 47,92,117,173,210,239,276,330,377,412,440 MIMEFEFSKMLEEVLTWIVA EFKIDEYPELRKKIFDSRIW 55 HI0281 11 out 10 438 3 2 3.98 39,71,113,176,204,257,303,343,365,399,422 MSTQLRNNPMKVALASMVGT LMTFLALLASKETKNVDLTE 56 HI1227 11 out 7 414 2 2 2.87 43,83,110,141,178,204,243,323,349,380,402 MTNQIPPSLAENQSKLKQSF LCAIVAIILNLVLPKAKNEV 57 HI0098 11 out 4 473 9 2 10.64 42,76,102,159,202,257,301,341,363,417,464 MGLTRSVELLFRPRMAELLS ALMLVLFSGIPVFLLKKYAF 58 HI0867 11 out 3 404 8 1 8.95 60,93,115,152,181,217,261,302,332,360,388 MSLIKDSSIYLIGELSAKCV GILPVLYKITKRVEENEYAT 59 HI1107 11 out 3 468 0 2 0.64 36,58,94,123,161,211,266,288,341,380,457 MKTTHRTRMPTTLEAFSPII SGIIFAIIYGASGIGIAKLK 60 HI1700 11 out 3 404 9 0 9.40 62,109,131,155,185,220,267,306,342,370,392 MIFMKVFKDSVIYLVGELSS IGSLSIIPILYFMTSKVSKT 61 HI0035 11 out 2 551 1 0 1.53 24,46,80,110,132,179,393,418,447,485,543 MSDIAITISLLALVAVIGLW PLVMFLRIMSPQLLAVLLWA 62 HI0092 11 out 1 419 5 1 5.75 26,48,77,125,192,239,262,298,335,363,417 MTTVSAIGALVALIVAIFLI ESAVGLMMTIVSTLIFGVFK 63 HI1586 11 out 1 519 5 1 5.06 51,105,145,193,235,287,330,366,407,429,509 MLSVLSINYRYYLMELIDFS LAGFAATAVSLIVIIFAVKK 64 HI0798 10 in 42 441 9 2 -12.42 41,93,139,169,200,234,287,332,390,413 MAKQPGYQARSTNSGKGELK HLMSSQYESALKKANLKGFG 65 HI0824 10 in 20 336 9 3 -13.38 35,67,89,128,150,200,248,280,302,325 MSALEKNKSFDLLKQNAIYF IKGSIIILAVAIDSLKYAKK 66 HI0878 10 in 5 306 9 3 -14.64 31,53,90,117,143,172,204,230,264,294 MKQQPLLGFTFALITAMAWG VVVCGAILSAIGHKLLPHKN 67 HI0911 10 in 5 618 6 0 -6.07 41,76,104,128,172,205,250,292,315,381 MSQLANPELMKVVILLASSV NKETEEILSEKIEEEISNDH 68 HI0680 10 in 4 298 9 3 -17.65 23,52,91,118,146,168,194,229,254,282 MFKGILVSLLASFLFGYMYY VMVDGVYKHTQKEVYKCHLK 69 HI0511 10 in 2 328 9 1 -10.01 44,75,120,142,173,196,231,264,287,318 MLHFAHIFQNKVHTMNITKP MIGLLVLMTIYKLTKGQFFL 70 HI1376 10 in 2 291 9 1 -10.93 21,45,86,113,135,168,200,228,258,285 MHNLIFAILCSVAVSVLLKI LGIIFSLSAIFCLYYLDKII 71 HI0687 10 in 1 304 9 2 -17.84 29,56,89,115,152,179,209,241,270,295 MNNENMVRVFYVLLMGLGFP ISGIIVIIGCVLALKRKNKE 72 HI1363 10 out 16 474 4 0 4.91 25,52,74,104,157,192,221,243,271,335 MSEGLVQAAYILAALLFIMS ENTQMLFGDAKDRVEDILKA 73 HI0477 10 out 10 400 7 0 7.44 48,99,137,160,192,230,288,338,360,391 MNKTVGSTLLVAGTMIGAGM GVLITSIPFAIRAGYLPFVV 74 HI1135 10 out 10 360 7 0 7.40 45,85,110,152,186,219,256,283,305,356 MLVWLAEYLVRYETAFNAIS IRFWIISLMLVLMGLVTLKL