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Transmembrane helices for haein (Haemophilus influenzae)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1HI014717in8|ali|phd|phdHtm|63350-5.7947,76,121,156,191,233,277,318,372,395, 441,463,496,541,570,592,624 MCRNGPTFPYSSSNGVSMKY
2HI056116out6|ali|phd|phdHtm|633000.0527,64,90,147,174,196,247,298,331,363, 396,440,501,539,585,627 MYLGLKVGVTFASSIPAAVI
3HI002015in5|ali|phd|phdHtm|47980-8.8428,57,79,107,139,162,203,242,290,312, 343,384,416,441,472 MALSKNTKLVILMAIPLITF
4HI101514in6|ali|phd|phdHtm|48840-4.7330,52,77,131,153,195,256,295,330,369, 393,415,458,480 MFGLPIPIIGLLIAVFVLVF
5HI085214in2|ali|phd|phdHtm|46390-11.6030,67,96,121,147,176,214,242,290,316, 346,368,414,448 MTTESNAYRGLAWVAAMALF
6HI121814in1|ali|phd|phdHtm|53221-2.1719,45,73,120,147,202,231,255,298,368, 405,441,494,527 MLSFILSIFPIVLLIYLMVK
7HI060814out9|ali|phd|phdHtm|4619011.8831,60,102,140,162,190,229,268,307,333, 371,393,424,456 MGEMASLRSHKNGIIFILDI
8HI035013in6|ali|phd|phdHtm|42510-1.6634,64,101,123,165,191,242,264,290,312, 351,383,409 MSNSLSSQIFTRKMLICAFT
9HI093613out24|ali|phd|phdHtm|635101.7160,112,145,191,227,293,329,374,411,444, 469,503,623 MLPELGFFLLLLATASAFFL
10HI109413out24|ali|phd|phdHtm|648303.5560,112,144,194,228,295,330,373,410,443, 469,511,632 MIAELGNYALALSLAVSLML
11HI160413out19|ali|phd|phdHtm|420000.9528,63,111,133,165,203,232,273,295,323, 360,382,414 MEIISQYGSWLVWITAVFGF
12HI097513out5|ali|phd|phdHtm|4849111.9423,62,92,142,175,209,256,291,334,389, 415,438,462 MNLGIILPLIIYLTFVFGAA
13HI012913out2|ali|phd|phdHtm|550313.9531,80,112,160,211,237,266,314,372,408, 430,491,525 MQGDKFIIASLLCIILLIFF
14HI135212in28|ali|phd|phdHtm|50460-6.7825,88,145,183,208,255,297,345,395,424, 447,481 MFGFDPSLITFTIYIFGMLL
15HI089512in16|ali|phd|phdHtm|103290-10.4336,359,389,411,457,486,548,873,895,927, 978,1012 MYEEIRMKFTDIFIRRPVLA
16HI169012in16|ali|phd|phdHtm|45730-3.3437,64,123,174,206,249,287,326,348,373, 414,454 MTTNNKQRQTWSSRLTYVMT
17HI041812in11|ali|phd|phdHtm|44792-13.6449,82,124,146,186,215,268,316,349,372, 410,433 MCKPQQKHYGRQVMNTQNSL
18HI022612in9|ali|phd|phdHtm|43692-11.7528,58,95,137,166,211,246,297,337,361, 386,426 MFSRKDIIVLGMMIFALFLG
19HI102912in9|ali|phd|phdHtm|42562-6.2227,69,114,161,188,234,256,289,331,360, 382,416 MTVIIFLSVLLGTIILGVPV
20HI056012in5|ali|phd|phdHtm|48660-6.1246,102,151,187,216,250,292,331,353,393, 439,478 MADGASAWIQTGKAAFQLPM
21HI124212in5|ali|phd|phdHtm|39892-17.7929,65,99,121,152,180,239,268,307,329, 362,384 MNQQKSTFIFILTLGILSML
22HI170612in5|ali|phd|phdHtm|66991-10.5429,67,107,156,205,244,277,334,365,419, 463,488 MTKRTSFNPLVIGVTLFFIL
23HI059012in4|ali|phd|phdHtm|43581-8.8731,54,111,143,168,206,246,292,340,371, 406,428 MSAKSNKIGVVQLTILTMVN
24HI0195_112in3|ali|phd|phdHtm|111190-9.9828,509,559,593,633,665,708,734,815,861, 905,941 MIRKLMKIPPFFTALFASAM
25HI030812in3|ali|phd|phdHtm|38841-4.8330,59,92,114,147,173,231,258,299,321, 345,374 MQVRPFYWLALSFLGYYCAY
26HI102012in3|ali|phd|phdHtm|53891-12.4636,80,115,157,217,262,311,354,393,423, 483,528 MFSLFHHPQLRPRHYAGGVV
27HI061012in2|ali|phd|phdHtm|42892-11.9232,70,106,128,165,218,269,304,334,357, 389,420 MNAKVLEKKFIVPFVLITSL
28HI110412in2|ali|phd|phdHtm|40781-8.1135,67,105,127,153,179,246,279,308,332, 368,394 MTNKVNSYGWKALIGSAVGY
29HI161212in2|ali|phd|phdHtm|46491-13.2834,74,117,151,185,213,269,301,341,372, 411,441 MNFRLLSQYHADIKKLIKIS
30HI059412in1|ali|phd|phdHtm|50960-6.9933,137,176,209,231,259,324,346,380,422, 473,503 MDASKKKKTFNFPSAFTILF
31HI012512out10|ali|phd|phdHtm|438515.8343,77,121,154,196,218,259,311,348,370, 404,436 MPTLEKTFELKQRGSTVRQE
32HI072312out5|ali|phd|phdHtm|423001.0029,53,89,112,155,204,226,256,299,321, 351,419 MRILSIIRIIGILVMCFSGT
33HI096412out4|ali|phd|phdHtm|510303.3037,97,146,171,199,251,286,332,370,415, 460,497 MTLLSRVLGLVRDVVIAHLI
34HI153012out4|ali|phd|phdHtm|40401-0.6126,56,87,117,139,179,237,266,302,327, 360,396 MSYTFSTYETLALASLVLLL
35HI077212out2|ali|phd|phdHtm|447505.9038,74,120,154,208,270,296,323,367,389, 419,444 MISRVSRFMTTFVSKYLPDP
36HI028711in11|ali|phd|phdHtm|41880-8.1625,54,104,151,175,212,250,308,357,379, 409 MIQQKSPSLLGGAMIIAGTA
37HI005011in9|ali|phd|phdHtm|40152-5.2747,89,138,164,214,236,268,312,341,363, 393 MLLSASIMLYHLDMFDTQLI
38HI028911in8|ali|phd|phdHtm|41290-13.1746,68,110,149,175,210,259,305,351,377, 411 MKSTEKLKWNKFDATWMLNL
39HI022511in5|ali|phd|phdHtm|40013-1.8543,88,125,156,185,210,242,286,322,358, 391 MNFLLCIFKGVYVIKLIQRF
40HI032511in5|ali|phd|phdHtm|45030-3.1333,79,126,148,174,215,275,320,362,392, 449 MLSNPVVISIIVLLALSLLR
41HI089711in5|ali|phd|phdHtm|51020-2.8533,75,115,163,187,255,295,328,357,389, 500 MGNSAKKFPPIQGGALILLT
42HI115411in4|ali|phd|phdHtm|44082-8.0118,48,86,122,195,239,277,300,354,383, 411 MLLVNLAIFIAFLLLLAQLY
43HI172811in4|ali|phd|phdHtm|39790-10.4630,59,99,135,161,196,244,291,329,354, 387 MASITHRRNAVLGAAFLMAT
44HI006111in3|ali|phd|phdHtm|78850-5.9824,46,68,249,280,302,337,390,418,472, 528 MKLNLITLVVLLIVADLTLL
45HI013511in2|ali|phd|phdHtm|39692-9.0434,70,108,130,160,186,229,264,313,357, 383 MSLYLKAEKIQSWRVLIMAC
46HI171611in2|ali|phd|phdHtm|35592-25.1121,58,81,113,146,175,198,229,257,309, 332 MLSIFVTFLGAFLTLIVMRP
47HI087411in1|ali|phd|phdHtm|39940-4.7230,52,81,106,129,166,191,227,347,376, 398 MIQEKHLTFTINLLVSLFFL
48HI164311in1|ali|phd|phdHtm|33881-8.7325,49,85,112,144,174,196,235,272,299, 331 MNTRPFYFGLIFIAIIAVLA
49HI073611out35|ali|phd|phdHtm|508414.2967,116,176,203,250,288,338,383,411,454, 491 MAHSAPKAQKRETFSGRRAF
50HI110911out27|ali|phd|phdHtm|375808.1031,64,97,126,177,216,241,289,320,343, 366 MFKLKSVNLQVYIMLIAIAV
51HI051911out22|ali|phd|phdHtm|417000.5022,52,74,117,146,187,210,272,302,370, 409 MSVLSSILGMVVLIAIAVLL
52HI074611out12|ali|phd|phdHtm|440424.7123,68,117,157,188,251,283,315,354,385, 436 MSAMFLLQFAIVLLCIFVGA
53HI088311out11|ali|phd|phdHtm|4569112.5433,82,106,162,199,228,265,320,368,403, 430 MTIESILSAIDSFIWGAPLL
54HI018311out10|ali|phd|phdHtm|4819112.9347,92,117,173,210,239,276,330,377,412, 440 MIMEFEFSKMLEEVLTWIVA
55HI028111out10|ali|phd|phdHtm|438323.9839,71,113,176,204,257,303,343,365,399, 422 MSTQLRNNPMKVALASMVGT
56HI122711out7|ali|phd|phdHtm|414222.8743,83,110,141,178,204,243,323,349,380, 402 MTNQIPPSLAENQSKLKQSF
57HI009811out4|ali|phd|phdHtm|4739210.6442,76,102,159,202,257,301,341,363,417, 464 MGLTRSVELLFRPRMAELLS
58HI086711out3|ali|phd|phdHtm|404818.9560,93,115,152,181,217,261,302,332,360, 388 MSLIKDSSIYLIGELSAKCV
59HI110711out3|ali|phd|phdHtm|468020.6436,58,94,123,161,211,266,288,341,380, 457 MKTTHRTRMPTTLEAFSPII
60HI170011out3|ali|phd|phdHtm|404909.4062,109,131,155,185,220,267,306,342,370, 392 MIFMKVFKDSVIYLVGELSS
61HI003511out2|ali|phd|phdHtm|551101.5324,46,80,110,132,179,393,418,447,485, 543 MSDIAITISLLALVAVIGLW
62HI009211out1|ali|phd|phdHtm|419515.7526,48,77,125,192,239,262,298,335,363, 417 MTTVSAIGALVALIVAIFLI
63HI158611out1|ali|phd|phdHtm|519515.0651,105,145,193,235,287,330,366,407,429, 509 MLSVLSINYRYYLMELIDFS
64HI079810in42|ali|phd|phdHtm|44192-12.4241,93,139,169,200,234,287,332,390,413 MAKQPGYQARSTNSGKGELK
65HI082410in20|ali|phd|phdHtm|33693-13.3835,67,89,128,150,200,248,280,302,325 MSALEKNKSFDLLKQNAIYF
66HI087810in5|ali|phd|phdHtm|30693-14.6431,53,90,117,143,172,204,230,264,294 MKQQPLLGFTFALITAMAWG
67HI091110in5|ali|phd|phdHtm|61860-6.0741,76,104,128,172,205,250,292,315,381 MSQLANPELMKVVILLASSV
68HI068010in4|ali|phd|phdHtm|29893-17.6523,52,91,118,146,168,194,229,254,282 MFKGILVSLLASFLFGYMYY
69HI051110in2|ali|phd|phdHtm|32891-10.0144,75,120,142,173,196,231,264,287,318 MLHFAHIFQNKVHTMNITKP
70HI137610in2|ali|phd|phdHtm|29191-10.9321,45,86,113,135,168,200,228,258,285 MHNLIFAILCSVAVSVLLKI
71HI068710in1|ali|phd|phdHtm|30492-17.8429,56,89,115,152,179,209,241,270,295 MNNENMVRVFYVLLMGLGFP
72HI136310out16|ali|phd|phdHtm|474404.9125,52,74,104,157,192,221,243,271,335 MSEGLVQAAYILAALLFIMS
73HI047710out10|ali|phd|phdHtm|400707.4448,99,137,160,192,230,288,338,360,391 MNKTVGSTLLVAGTMIGAGM
74HI113510out10|ali|phd|phdHtm|360707.4045,85,110,152,186,219,256,283,305,356 MLVWLAEYLVRYETAFNAIS

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