--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Haemophilus influenzae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 75 HI1471 9 in 23 337 3 3 -3.62 29,82,123,145,168,214,261,301,324 MQPDSYPKILFGLTLLLVIT LIGAPLFGVLVYKLKRGGMN 76 HI0031 9 in 14 371 2 2 -2.39 40,67,94,127,162,201,294,326,356 MEDKIPFWLRVWQRLHIDFW MASFGLLMSIHTHKSQFMKR 77 HI1538 9 in 3 292 3 1 -3.04 21,52,99,140,167,201,234,258,281 MRGYLFGILSAVFWALSGLL LLTLLLSAGVIVTLYYKGEQ 78 HI1241 9 in 1 266 9 2 -15.65 29,59,90,112,141,176,205,240,264 MSEQSSKYIAALLAVLSISM TNSLFILLFIAVCLPLWMVF 79 HI1545 9 in 1 414 7 2 -7.58 32,73,112,165,205,242,321,350,380 MNTSRLFSLLFQGGLVKRIA SSTDVLFTAAVCMEEERKNA 80 HI1671 9 in 1 416 6 1 -6.27 80,127,161,191,280,320,342,370,399 MPKTKLTSPPFKILKCTECD TMLSTSQFDSKLIWKIYDRE 81 HI0503 9 out 26 323 6 3 6.23 38,69,103,132,187,235,267,290,313 MMKNETSNFQIGRFLIEQRS AKALVILVAVLADNYLGTKK 82 HI0528 9 out 14 406 0 2 0.48 52,104,148,170,200,236,296,354,397 MLKNKTFGSALIIAGTTIGA GVVIMLIPFLIQWGYLPVVA 83 HI1137 9 out 12 394 2 2 2.85 45,82,110,142,185,214,306,345,374 MEFLQNIKKNYDEWTRITPQ LLRIDHENRLFRIGQARLRD 84 HI1076 9 out 9 521 9 0 15.62 36,73,114,145,205,236,412,447,497 MLDVVDLSRLQFALTALYHF YARLGPSALKTGKYYFEQSA 85 HI0427 9 out 4 522 2 1 2.05 54,83,124,163,268,337,379,480,504 MIKIMEFTMTNIQAFMKNFL IEFILPAATIWLASLGLILP 86 HI1066 9 out 3 321 0 0 -0.14 38,78,114,144,170,202,242,278,314 MTLDYPVPFHTPNLVWDYTI DLIGVFCLRFFILYAGQLTV 87 HI0166 9 out 2 411 2 1 2.44 75,141,182,217,297,319,342,372,397 MGLKNLFEKMEPAFLPGGKY PIFDYIVVQANIKRRRARTN 88 HI0446 8 in 20 556 1 1 -1.99 252,292,331,370,406,447,508,543 MKLFLTQSANVGDVKAYLLH AIGALSTGVVYAIIKSKNNA 89 HI1075 8 in 9 378 9 3 -10.33 27,89,142,184,223,279,312,355 MIDYEFLRFIWWVLVIVLLI YSKMFGRLDANFIDKNKHSL 90 HI0338 8 in 5 348 1 3 -1.64 32,54,79,160,227,257,279,320 MQNNLNLHRTLLGIAAVIII LESSPNTAKYACLLGDVEDF 91 HI1346 8 in 5 286 9 2 -9.09 34,88,121,143,170,222,244,271 MKIINNKFQKITVAIIFSWL ALLIFVYYRANKLLNRKVEL 92 HI1639 8 in 4 321 5 0 -5.33 25,53,99,139,163,199,264,305 MLWSVLRHILWVALLLLVLS TFTKIFTFILDPFKKKGWYA 93 HI0198 8 in 3 255 5 0 -5.22 34,56,93,116,150,173,209,246 MDIGIDLLAILFCVGFVASF VVIMSFMMTAKMVYDQGWFH 94 HI0509 8 in 3 308 7 2 -7.13 41,63,125,147,174,202,262,308 MRSKKMINEKLKMWWETARP AQMSMISLLINILFSLGLLI 95 HI0223 8 in 1 258 9 0 -15.60 28,86,109,132,160,193,223,249 MAYADHDLWVTFNSISDYWL PIWLSLIVIGIEGLLNKKKV 96 HI0806 8 in 1 268 3 4 -3.87 29,65,99,121,165,198,228,263 MAFSTIFILLICGICTNMVS LLAIILFCIAAYMCILEFVF 97 HI1680 8 in 1 718 1 1 -1.21 30,89,122,154,410,453,492,524 MNIRLNAKVISTIPVFIAVN LLPQFYGYFKKEINCQSAGA 98 HI0919 8 out 8 288 4 3 4.92 32,72,106,138,170,213,239,288 MLKQRVLSAIVLIAAVLCAL DRIDSLTAAVPFFSYFYFFV 99 HI1045 8 out 4 279 9 4 13.75 31,65,107,133,167,200,250,272 MNTGLYELPLVFFTVLAQSA EGIGRVLFYGLHMTYGMTIG 100 HI0585 8 out 2 279 5 2 5.16 48,94,129,163,209,231,253,279 MMSPGSSHSAMISEMSGLTI MVKRTAPGMILAVLFLALFM 101 HI0902 8 out 2 264 0 4 0.57 28,66,102,124,169,198,231,262 MFTFILLCLLVGALAGFLAG STLKKGFALFLIVVAINMFL 102 HI0290 7 in 54 722 4 0 -4.95 112,139,176,201,361,383,702 MLDLTPQSKKISIQIGGMTC AMALSSISVLMNALRLKKVR 103 HI0359 7 in 13 271 1 4 -1.05 39,80,113,155,197,226,261 MFDWLLEPLQFEFMQNALLT IILLQAAFFVIALAYSKIRI 104 HI1382 7 in 12 315 3 0 -3.43 45,96,137,186,238,262,301 MLTKSRKYFNQTWIESLFKQ TTMVLILSRLMITKMQQTKG 105 HI0044 7 in 6 220 7 2 -7.01 42,64,95,121,163,185,212 MQSRLIVDAQKESLLSTHKV VSIYNLFLSLLRLLSIFSSD 106 HI0296 7 in 5 230 9 3 -14.09 28,77,101,133,158,199,229 MIYFTMFLLGGILGIALWFY PFAPFMNLSAVIIYFVKYYG 107 HI0355 7 in 4 245 5 0 -5.54 28,78,118,140,185,207,232 MKIRLLKPLLIVGVLLMIWQ SISLCLYFSIDWLLHRFIWS 108 HI1248 7 in 3 322 6 1 -6.86 28,72,121,153,240,262,312 MKKYKTGLVLLVIALALLVY FFALSLLYGTTISTGGSKIL 109 HI0360 7 out 14 282 2 4 2.52 37,75,114,155,196,240,264 MLDLLLEPFSYDYMLKAMIL AFLFSPKYGLLTRNKKAVEN 110 HI0407 7 out 9 261 4 6 4.33 27,66,103,147,189,218,247 MFEILFPALLTGIVLSLITA PSVVICSAFLFVLSLFKRER 111 HI0056 7 out 7 237 9 4 17.66 32,74,99,151,173,202,226 MFEWIADPEAWISLVTLAAL FAMGFSVVVEMINIRMRRLM 112 HI1345 7 out 7 247 4 1 4.69 18,74,108,137,187,209,238 MFVVYAYLYIPIIILVTNSF MIVLSLALVVLSQLITRKNN 113 HI0885 7 out 5 579 3 1 3.42 201,244,270,326,356,392,429 MKKLFLFFTLIFTAFAANSG GSRVTGFMDADAFSNWIEKL 114 HI0904 7 out 4 268 9 2 22.31 41,81,120,147,200,222,257 MNSNYLLLPHFDPSIFTLGD MIIGGAFIMAWAYSRKSAVI 115 HI1686 7 out 3 358 4 1 4.42 46,68,102,140,254,291,320 MFKMVSSPHTHSGKLTAHIM VPLIDHYTRPRVSGYPTKGR