--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Haemophilus influenzae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 116 HI0690 6 in 116 264 3 4 -3.01 30,59,101,163,194,250 MDKSLKANCIGEFLGTALLI AGAWLYKKAIGGNLPCNCGC 117 HI1157 6 in 66 586 9 0 -12.39 47,81,172,194,269,300 MNKLRQKYLQKWLRAQQEPI TELQHEGFFAELLAQRQQDI 118 HI1156 6 in 55 576 9 1 -12.96 40,62,156,178,263,296 MRTLLPFIRLFKFAKFPLIL GDYNSLITKENGFFKRLIER 119 HI1123 6 in 31 306 9 4 -9.86 27,116,157,190,253,295 MLKFIFKRLLEALPTLFILI TILFNAIVDILYAIIDPKIR 120 HI0872 6 in 29 471 5 0 -5.71 32,68,103,127,299,465 MNRLFFSKIALWLLDFLTFN WNDIAILFKTMNVVLNRDGA 121 HI1186 6 in 29 295 9 2 -12.05 46,116,156,178,229,279 MSDTPLTFAPKTPLQEFWFY VLAFNLMGDGLRDALDPKLK 122 HI1187 6 in 28 333 9 4 -10.82 28,119,157,218,277,322 MFKFVFKRILMVIPTFIAIT IIVVNLTVDLLYGVVNPRIR 123 HI1122 6 in 24 311 9 2 -11.98 66,134,174,196,247,296 MTDYRTQPINQKNADFVEQV TLFCFNFIGDGLRDALDPKD 124 HI1381 6 in 19 282 9 3 -14.81 40,93,132,154,207,273 MKTNQNLRFYWRKTHNKLML LITLFVLCLNIFTRLFFQHK 125 HI1091 6 in 15 246 9 5 -9.83 40,80,111,144,176,222 MWKWLHPYAKPETQYRICGK MELLKEDAKRPWVKALAQTL 126 HI0188 6 in 10 256 9 3 -10.34 42,88,136,179,209,231 MSNVDESQPLITHLVELRNR FYQPKDDESAVKNNDESEKT 127 HI1688 6 in 10 235 9 5 -9.73 58,81,107,138,173,223 MTDLTEKNTALEEEKIESAV GAFIGLGLLLAIKNRIDNIK 128 HI1090 6 in 8 221 9 5 -9.08 38,65,115,151,176,211 MIFLEIIKRELQIAMRKNAE VGAVTLSPFAIAAALRISLD 129 HI0168 6 in 7 208 9 2 -11.51 35,58,88,116,154,196 MSGKTSYKDLLLAPIAKNNP FFIIGFVIWGLRTWKPEQQE 130 HI0181 6 in 7 284 8 6 -8.72 55,92,137,186,219,274 MASENQKLSSVALTPVEATD GNIVGGAICIGVFQRYLTKT 131 HI1640 6 in 7 295 8 4 -8.54 48,119,153,175,228,279 MQNKEPDEFRESTSIFQIWL TILLSIIFSNGLTKAINQHQ 132 HI0618 6 in 6 192 6 2 -6.47 29,78,100,125,158,180 MKNFLAQQGKITLILTALCV GLIVGLIWGFIDSKLRKNSL 133 HI0211 6 in 4 241 9 2 -27.97 24,66,89,178,205,231 MFKRLSLYTLLLCLVPFFIW AWLINSIIFAFLKKKAIFVM 134 HI0108 6 in 3 297 9 2 -10.32 133,162,189,214,247,285 MEHEYQRAVTRVCVQTALLL GAIVFGLALPGLLFYRQKPV 135 HI0276 6 in 3 269 7 4 -7.29 49,107,148,186,225,252 MISLKNFGLLFWKRFSENKL VVLVGAQLASTLDEIGEQIE 136 HI0302 6 in 3 522 9 1 -11.32 47,83,113,191,217,514 MKNLNRILLSIKFMNKYFTY SLLFLLLHSMMAFIRRKMNI 137 HI0862 6 in 3 235 9 3 -10.88 36,73,105,142,179,218 MKLTSPIFNDQQKRRAIIWL GVVLNVILRKLQMLVTERVP 138 HI1240 6 in 3 220 9 4 -9.27 45,81,110,134,169,193 MLLSILYIIGITAEGMTGAL PVFNYQELTSEEQDKQPNKK 139 HI0522 6 in 1 218 9 5 -14.36 42,83,108,134,174,203 MKKKVRVIPRTSWAATSLWT GSVVQFFLNIIARLPHIPYE 140 HI0825 6 in 1 244 9 4 -9.33 39,82,127,159,209,234 MLINFTQVLQDSWNFFRNQK ALLNIFMLVVTYRFYSLFMK 141 HI1626 6 in 1 238 4 3 -4.28 38,93,133,157,200,236 MKLLISNQYGAIVMALVPFI VGLIEFAITAVFFILLLVAT 142 HI1703 6 in 1 358 4 3 -4.60 31,82,118,298,325,348 MINTLDRYIGKSILGAIFAT ALIPSLLFIVMIWWLLSRKR 143 HI1704 6 in 1 372 9 2 -12.07 33,76,117,287,315,348 MILIRYLIKEVFKSQIAILL IMYKFRYLFSKKGSAKDDKY 144 HI1692 6 out 28 229 0 0 -0.10 29,63,103,153,175,211 MEISAINLSLSVAVSSMLWS LLSEWLSKRMQKKLGQGNVA 145 HI1178 6 out 27 221 0 1 -0.99 35,68,104,144,166,203 MFSDFLSLMFTAALMTLGLA ISQVGIRKLELRFTRFERGV 146 HI0485 6 out 16 262 9 4 9.85 45,106,150,188,223,249 MSGQTTSEYISHHLSFLKTG AFIFMMLTVVYLSIAYNKAD 147 HI1177 6 out 16 227 0 1 -0.29 34,68,107,144,169,207 MFQEYLSVIVKGIPTSLLLT LLLRKLEKKVLAFERFEVSK 148 HI1683 6 out 9 192 2 4 2.63 36,59,89,120,154,186 MTHYILLIIGTALINNFVLV IALITAGLMSLAFMGFTGLV 149 HI1467 6 out 8 589 7 0 7.93 34,75,118,200,231,317 MNWQTELNNSLNWILTALFW STLQQFHNKQLKLDVCLLCE 150 HI0170 6 out 7 198 8 5 8.65 33,59,94,127,159,192 MEHYISLFVKAVFIENMALS ITFISVGLMALGFMSFSGIQ 151 HI1298 6 out 5 231 4 1 4.21 23,49,111,136,165,228 MQQYIIYLYTFLTIFGFWLA LCGIISSILAPFVFKLIYFF 152 HI1454 6 out 5 213 9 6 17.78 33,64,93,143,175,209 MLDQQLLIGTVFLAGLASFL KIGGGILIIVMGILLITNNF 153 HI1086 6 out 4 261 4 0 4.74 34,72,115,169,218,255 MIVNFISALGKQVIDFFRAL HASLVVLGLDFILTAIMFGA 154 HI1621 6 out 3 206 7 1 7.36 29,60,101,123,157,189 MHLSEGVLHTPILLAGAVLA GVITLLGKMYPEVMNRTENF 155 HI1738 6 out 1 244 4 3 4.21 42,75,97,161,186,225 MNLSQQNQHSNPITEAAKAT GIWLILTMRITKLETKLESL 156 HI0060 5 in 171 587 2 0 -2.86 46,89,179,274,302 MQEQKLQENDFSTLQTFKRL HKTLLEQNGAYKQLHSMQFT 157 HI1051 5 in 129 614 6 0 -6.79 63,104,173,200,296 MFNKIFSWFENRLNPYPESN NGLYAKLWNHQSGGFLSESA 158 HI0663 5 in 42 560 8 0 -8.52 25,48,146,168,245 MLWNWVALVGGIISAVVFSY AYAEMFQQQKDLEQIREVAN 159 HI0346 5 in 6 287 9 1 -15.82 49,101,159,190,214 MANAPKFAGKESREKWGWWY CIDVCAEKVFKFSTRFDHSG 160 HI1064 5 in 3 485 9 1 -9.48 63,92,114,146,178 MKKLNMEILSERWIIATFSF RYSKFHQMIWNAKNIRCLNQ 161 HI1307 5 in 2 210 9 5 -14.18 64,86,137,168,205 MMLNLIIVHLFGLMTPGPDF GIVFLFFGCVLVYNGINEII 162 HI1629 5 in 2 212 2 5 -2.08 51,85,146,174,202 MNQFFITSINIIKKQEQMEF QIVIYIFIGYLYYSFLEMEK 163 HI0841 5 in 1 585 9 1 -16.47 45,82,111,161,197 MKWIKKGTFSGKQYRDDVSR DRPPLGIFLEAFQLQNFFFE 164 HI1246 5 in 1 647 9 1 -12.10 34,80,105,160,192 MLVVFTMKKAHSPLFPIFTF AHALLGSYLYKNRLYSSGEN 165 HI1079 5 out 35 210 8 5 8.62 28,69,95,158,196 MLEAAILYTLPLAVISFFCG IFCFVLSFLQDRLEIRLSRH 166 HI1362 5 out 23 512 7 1 7.56 184,418,440,469,497 MLIGVPRELLENESRVAATP SINIFGGFRVTQRMLAMFRK 167 HI0036 5 out 15 592 9 2 9.07 34,76,119,200,231 MDYSQEAITSLIWILQTLAI TLKTLHQQQLILQDKGQWQV 168 HI0239 5 out 8 325 0 3 0.55 55,171,212,272,298 MMKLFTKDKDGHFIREINGI VGLRREHMIPPKVDKEIDEL 169 HI0240 5 out 8 616 0 1 -0.84 26,486,515,574,597 MLNRYPLWKNLMVIFIVAIG TGTRALVNALYGGKQLKKLL 170 HI0826 5 out 8 185 9 7 12.37 37,68,94,143,165 MKQLLDFIPLILFFITYKLG SGVYIYRYLPKDGSNSKDGE 171 HI0918 5 out 7 443 8 1 8.93 23,121,386,408,436 MSFLWSLGSFIIAIAVLVSV IGAALLLSLTVFALFNDFLR 172 HI0266 5 out 6 199 9 7 18.07 23,72,97,135,173 MSLFALFYMLFAYLLGSISS DNIQRLWRGQEDKVWAKFKK 173 HI1074 5 out 4 150 2 0 2.94 18,40,70,99,138 MTLQLNTIALLLVILLILGV GGIPVGPLIAAGILALLLGK 174 HI0039 5 out 2 162 9 7 18.20 28,52,88,123,149 MQTRFILQWFTILSFFVIAF GLLWPWVFLLMRKIRRKVKL 175 HI0275 5 out 2 551 4 0 4.80 23,45,70,117,147 MIAYIFLALFTIAAVIFIVN SDIQLLNNYRHYLYQTLAIA 176 HI0452 5 out 2 432 4 1 4.97 26,81,120,165,332 MIMELFHTILAIVALILSSA VIDTENFKIDQILVSLVKEQ 177 HI0703 5 out 2 192 8 5 8.98 44,76,120,147,189 MKIFGTMYDKTMEWSKHRFA IEIIGWSVVVLAVIAYFILK 178 HI1452 5 out 1 195 5 5 5.42 44,86,108,137,191 MEELLSAVIIGIVLGWLCKD FGMVTNLLPPLLLVFFSSFP 179 HI1001 4 in 13 541 9 0 -12.11 341,364,437,515 MDSRRSLLVLALIFISFLVY IAQQQLIYRGLEKKGLHSRK 180 HI0123 4 in 12 185 1 4 -1.66 38,98,145,168 MKFNIPIFLTIFRVILIPFF IWSMIQYLQVAKGSLLDNIQ 181 HI0734 4 in 12 240 5 2 -5.68 22,50,115,181 MLKLLRIFLVLICCILICVL YCHDLMEKRIAELDEEIAKG 182 HI1006 4 in 11 171 9 3 -24.37 25,84,112,150 MSKKSGLSFLWLSAVAFVID DAFKSEKKKVQDKQVEKCGQ 183 HI1102 4 in 9 272 3 6 -3.97 53,93,172,235 MLNLNELKSGFHYFVMGWHF NKSFSSQTGLDVRSENTGIV 184 HI0428 4 in 5 177 9 6 -14.94 35,62,84,163 MLALLKQFSEKRFVWFLLAF ILTLLLIAQVIKTRKQRRLF 185 HI0507 4 in 5 183 9 3 -9.49 52,89,139,169 MKENKPVDPYAKYNEQSNII VSAIALAYTDKILYSTSHKT 186 HI0886 4 in 5 134 9 2 -15.50 28,69,91,118 MNNLEKYRPYFLAFLRIVVA FLYFVFSGAGACALDNKFFK 187 HI1555 4 in 4 393 7 4 -7.17 44,281,332,375 MNFPISLYIALRYWRAKSAD STLYPAYRAAKVEPAAALRY 188 HI1620 4 in 4 167 5 5 -5.24 27,49,75,115 MKIHHLFQPHFRLIYLFIWG AWRIASKNGYCHARSWISSS 189 HI0008 4 in 3 238 7 5 -7.50 43,78,140,173 MSKIEISNDTRIIRHRTPAR LLNEQSGKVGKTKVLFKGFG 190 HI0051 4 in 3 165 9 5 -15.96 43,71,113,151 MGDKEGACFMKIAKYLDKAL VSYFFIVMFSMIKDYKESSD 191 HI0238 4 in 3 144 6 9 -6.43 37,65,87,132 MQQQISNYIHGKLLEILIVT VFFAIPLATLVKAVINALPQ 192 HI0297 4 in 3 406 9 0 -16.88 184,226,265,397 MTKKLFYYQASNPLNQKQKG LIGIIMMGMYLPIFNMGSVI 193 HI1005 4 in 3 519 9 0 -17.46 28,50,79,127 MMFGKKIIHSKTIWFYFLLF NNVVNVKELADDPAKLPETV 194 HI1030 4 in 3 161 9 7 -14.08 35,67,106,152 MMRSLAHFINKALEILCISI SAILITRLISTIFFIFRGEV 195 HI1073 4 in 3 124 9 6 -18.59 24,64,87,114 MKNKYLTLVALSGFFCVALG GTLFLIGWISLAYGSFKSKS 196 HI0392 4 in 2 245 7 6 -7.37 57,119,149,227 MDIFFVISGFLITGIIITEI LILPCIFTALIIHTTSQNNI 197 HI0720 4 in 2 283 9 4 -9.01 24,52,170,210 MMRILLFLATNMAVMLVLGI RSELFMSHPPLEKRIEALRN 198 HI1548 4 in 2 416 8 4 -8.86 43,293,344,397 MNTPFFISWRYQRGKQKNPL ASLYPASRAAKLQPAQVLSS 199 HI0318 4 in 1 172 4 5 -4.45 20,60,91,153 MLFINITFACILAIRFYSLS LILAVRIKQEESAMSHLFPK 200 HI0489 4 in 1 157 9 5 -9.23 35,72,119,146 MDIFSFFSADFWQANSLCFM IFLGKMVRYVALLFLSTPFL 201 HI0770 4 in 1 310 4 4 -4.97 49,199,256,297 MSRSTDASVFVQTAYTLRAV MGYVGAWIAATRHIAMMERK 202 HI1077_1 4 in 1 134 9 3 -9.09 38,60,101,133 MISGISGILCVVLVSKGKIS LDGLTTIITVAAQILMILPL 203 HI1206 4 in 1 163 5 8 -5.71 20,46,80,118 MIDYIIIGIIAFSILVSLLR IEWFFQQLQASSSFLTPTLN 204 HI0664 4 out 59 552 2 1 2.52 43,77,167,265 MRKNGFVVMGHLLKLVTPLA HRQSTMAICDQVIGIENGRM 205 HI0647 4 out 6 238 9 3 12.26 34,66,101,140 MENSSLLLTALFNPDHLIIF LKDAYALLKAEDGVISVEVD 206 HI1036 4 out 6 184 9 7 10.91 31,91,120,170 MAMMELSQTALFIGSIINLN ILLFLNNFMLDLLGGLWIIA 207 HI0976 4 out 5 128 9 2 10.63 18,45,83,105 MLYQILALLIWSSSLIVGKL KTKQNGFTGYSVQWHLLAWQ 208 HI0043 4 out 1 354 0 1 -0.19 75,106,231,267 MEKQIFEHSVNVEEEHYQPK LLSSVKDIVLGKNKIYKKEQ 209 HI0120 4 out 1 168 1 6 1.14 37,61,99,141 MADPHIKSPMDFLDYLTVII AIQKWRMPLHFDIGDKTKYQ 210 HI0586 4 out 1 145 2 5 2.98 23,46,73,122 MELFKSIVAVIGIIATIYFL ATLIPVLKSAGVRPATAGQL