--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Haemophilus influenzae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 263 HI0299 1 in 83 149 7 9 -7.10 35 MKLTTLQTLKKGFTLIELMI TTCKGTDASLFPANFCGSVT 264 HI0007 1 in 38 312 4 3 -4.26 283 MAGTAQGVQTQDVIKISATS DVEDHHHEFEENKPSKGENN 265 HI1132 1 in 32 610 9 2 -12.60 63 MVKFNSSRKSGKSKKTIRKL TTTKSAKRIVYIGEHKNQKV 266 HI0530 1 in 16 342 5 3 -5.44 99 MKILGIETSCDETGVAIYDE QHSDLAIDVKPRWAMAELPA 267 HI1725 1 in 16 781 9 1 -18.82 42 MTSQHSAKKSSKNTPKNNRT TETPPQESLWDVLDNPNPPA 268 HI0348 1 in 15 200 9 5 -21.77 41 MSEKKPNILKRFWQWFRKPS KGIAHQLPDMSGVESGFKDE 269 HI1541 1 in 14 615 6 2 -6.30 34 MFQVLKFCWKVLCFIRDLVM LTKFNDPKGQYLYCLNCGKV 270 HI1660 1 in 12 376 3 3 -3.28 216 MAYTTFSQNKNDQLKEPMFF SYLVGQIDSKVDTNDFDDFS 271 HI0409 1 in 11 475 9 2 -32.00 38 MPVQHVKLARDRRKKRAYIK TSAERKQFLVRVREAERMLK 272 HI1093 1 in 8 173 9 7 -23.94 31 MNPRRKSRFKLVIFVVLGIA IEAADLKGESARDRQEKEGA 273 HI0032 1 in 7 651 7 2 -7.10 47 MNLKKFFNTPTHEPFRDKKA YNVPIQQKKDLSQESEQING 274 HI0384 1 in 7 139 9 9 -17.66 35 MARRQRKAIKSEINIVPFLD KALNLLHLAGIKSVGLMTNP 275 HI0038 1 in 5 351 8 3 -8.18 29 MKPIFGKAPPLGIRLLIAIF TDFLQNEEDLPIEQQEERIE 276 HI0252 1 in 5 147 4 9 -4.90 29 MKKFDEINIIPFIDIMLVLL GKSAGKNSQESTPSQSVPTT 277 HI0383 1 in 5 372 9 3 -21.57 32 MQNNRQKKGINAFAISILLH AAPSDEIYEKYKSPIIDFDI 278 HI0708 1 in 5 461 5 2 -5.40 164 MTALFQQLPSVDKILKTPQG IWLDLRSLADIETLLNTLDE 279 HI0898 1 in 5 390 9 3 -19.60 43 MTQIATENPSTKSVSNKTDR LKYDESAVENLIESIIQQNS 280 HI1262 1 in 5 244 9 5 -16.32 52 MRFTKSIKFSLKCGRFFIMF ILGVEPYFLGEPQPLPNSTT 281 HI1739 1 in 5 309 8 3 -8.00 245 MKPTFLEFRHLKTLLALKET FYQTVKSQSFSTLPGLSVLN 282 HI0695 1 in 4 323 1 3 -1.81 292 MNDSILEPKHRGNVREIAAI EGVIYSLEKNFQVADIRAST 283 HI0457 1 in 3 347 9 3 -32.64 22 MKKFLIAILLLILILAGVAS NEHNKAVQEYLRWYRSQKNA 284 HI0941 1 in 3 101 5 9 -5.64 32 MILMFRMNKGMSFITLLFSL QCENERIIVRYPTSEILIKT 285 HI1698 1 in 3 353 1 3 -1.32 106 MKKIGFFIMNIGSAGGTERV SRLMSEDYGIEKIIEEWKGI 286 HI0150 1 in 2 295 9 4 -28.68 22 MRRFLLPVIFVIAAVVYSSI DNIMILKPDSDFFRFMQAPK 287 HI0167 1 in 2 244 3 4 -3.27 31 MAKFNKDSVGGTILVVLLLS NYWFSKDGFGPYLEKLHSGA 288 HI0696 1 in 2 1298 9 1 -12.69 47 MTEQIQPSETSPKSPEKPNK LYFQSVSSTNQVFDLLYKFE 289 HI0922 1 in 2 182 9 7 -14.75 33 MKYLHFTRPTIKVIFMINSI EQVARQLIVKIIALQNQIKR 290 HI1310 1 in 2 253 0 6 -0.67 44 MLLYKEKMKLLIKTSLSQWI KNKEKWQKERSENFVNERFC 291 HI0330 1 in 1 431 9 3 -20.00 156 MNSMDKNQQSSQNELDLGLN MRLSNGARFVRQSDGSYQYK 292 HI0421 1 in 1 54 1 9 -1.79 46 MASAIRNFPYPCFWKFVSMA TPLLIRSFGISVIGIDNADK 293 HI0438 1 in 1 168 9 6 -17.00 38 MSMNLLPWRTYQHQKRLRRL QVQPEQDTLFFHFDVEQGAE 294 HI0603 1 in 1 230 2 5 -2.26 57 MAKEQPNDLTEQLTDTPKTA QNAIMQKLSQLANTVDELQR 295 HI0839 1 in 1 341 3 3 -4.00 126 MTKMSITVNQTVLHQLVKNV TIKGLPPNLKDQLQKALKSE 296 HI1085 1 in 1 167 9 6 -12.83 30 MRQTIKYEFWVGLFLLLGIG GQFLYGSKKSDGNEKSESTE 297 HI1126 1 in 1 76 9 9 -20.54 74 MSLTRCPECRKKISENAENC LHIIWFCIFAIFIAVTSWMV 298 HI1152 1 in 1 451 9 2 -10.00 267 MKPAENSTALLKAQEQELRQ EHRSNIQTGSILLDKMKISG 299 HI1270 1 in 1 63 9 9 -21.97 30 MMRSTFLLRSPRLFFVLLVG WETISCSFSGQCEGNTEQTV 300 HI1327 1 in 1 45 9 9 -45.65 22 MMKKIFFIFALSGILAACTV SAGGGSNGVGLGVGIGSGIR 301 HI1369 1 in 1 839 4 2 -4.50 36 MRFFIYLIPILSRIPLAFIN SDEYGVYTPGREFWLEVGYQ 302 HI0185 1 out 219 378 9 2 9.52 218 MEIKQINSTIKSRAAVAFAP KINEAFELMHEGKSIRTVIH 303 HI0271 1 out 32 288 9 4 12.79 29 MEFIGKIIGVFLGWKVGGFF KEKTQQIQAAYDLICKAKGW 304 HI0053 1 out 30 342 4 4 4.76 190 MKERIKAICLEKPNNVVVKE PSFISDLSDHPENYLKINAV 305 HI1125 1 out 22 317 8 4 8.08 177 MTTQLDSLRNMTVVVADTGD EGIRKFAIDQEKLETMLSAK 306 HI0157 1 out 19 316 4 3 4.68 125 MNSRILSTGSYLPSHIRTNA QLLLLEAFGGGWTWGSALVR 307 HI0765 1 out 10 282 6 5 6.51 31 MKISMIFLPHFLYYTVPTFY KIKNEFGRVKIKMFGKQVPF 308 HI1133 1 out 10 488 8 2 8.64 319 MKKLTALFNLPELKNDIELH QIIGSEVVHFSDQEIALDFL 309 HI1308 1 out 10 270 0 4 0.08 136 MTLKIAIAGAGGRMGCQLIQ WLENKANGLFDMTDVLDLNN 310 HI0187 1 out 9 109 1 9 1.84 39 MAKKSIFRAKFFLFYRTEFI YKRERNRLNPCLILVFQNLF 311 HI0483 1 out 8 156 9 7 16.12 26 MNLNATLIGQLIAFALFVWF VGRSIDEAANNDIIDKLVAE 312 HI0938 1 out 7 170 1 7 1.41 27 MQKGMTLVELLIGLAIISIA FLFFNVGSIRVKTNQFDSAC 313 HI1134 1 out 7 457 9 2 10.56 301 MIKLSTVQLAQILQAKLIGD KGSRSMKMEDVIYSLKDKIK 314 HI0200 1 out 6 323 9 3 10.68 84 MLGTILHSELEKFYDPNLIV DLYEVGKLKPKSESDIVVEV 315 HI0744 1 out 6 148 9 9 11.36 35 MQEFISMATEFAQKHTLLAV VLKEGLSAWVAANLPLVKKH 316 HI1527 1 out 6 315 8 4 8.85 43 MERTMKNEKLPQFQPHFLAP YMWLHRRFKTRPDEKTPSLY 317 HI1544 1 out 4 202 2 5 2.40 98 MNHLIIFAHPNSVRSFGRAI MIELAAQKTQAKLTALLKEK 318 HI0149 1 out 3 63 9 9 19.05 33 MYLSLLLILLAWTLWLGNSL YLESKFGDEYRRYKQKVRRW 319 HI0151 1 out 3 410 2 3 2.00 104 MENEMSQNGSDRDPWSKPGQ RQNSYQPQPTTVAPIRQGRF 320 HI0171 1 out 3 411 9 3 10.00 26 MSDSVILALGIAAFTVIVLV IKMLKDLGVEDENILLDDFG 321 HI1092 1 out 3 67 9 9 23.32 36 MFFQTWSDFFNMGGYGFYVW NVLREKQREERLQQANKGNT 322 HI1195 1 out 3 410 7 2 7.33 30 MDHCKQCCRLICLIQNHFMW IQAKHLYHDREEITVHIALK 323 HI1378 1 out 3 425 3 4 3.38 38 MKKILNFIVEINLAIIISLF SSFSFIIPKRFVISKNNKEI 324 HI1473 1 out 3 281 7 4 8.00 125 MIYFSDKELDDLLLEDIYRG FITSAPYYVPPEDIKVVIEK 325 HI0127 1 out 2 45 9 9 31.00 31 MEDGEYGIAIAYGSILIVVM LFFDWIVGDTRISRSKAKKM 326 HI1605 1 out 2 203 9 6 14.65 188 MKKIYKALISSLLLSTSINV LLFGLLIPYVLPKRRRRDGW 327 HI0096 1 out 1 191 8 6 8.61 77 MDLADSQITQGNEIIQSMGL DCTELFNALFDVLTRLGISS 328 HI0725 1 unk 1 146 0 9 0.00 20 MIWIFFVIALFLVTGLTLYA EKNIKQELYILLEDIKSIEL 329 HI0855 1 out 1 115 4 9 5.00 95 MNLERLNEIEKPLLHIVKHD IISVLLHQKVCSISTDRLSK 330 HI0866 1 out 1 40 0 9 -0.85 31 MVKDNPKRSLILAIGFIIGI ILLPTFFILLGSVIQTNKKQ 331 HI0894 1 unk 1 382 0 4 0.00 21 MKIILVVFVLIFVGVIGFNM LVEWIKKDIVGAIEPAHKTP 332 HI0958 1 out 1 392 6 3 6.00 114 MIDCRYYQQNECRSCQWLEI DMFPQTSHYEVLVLLERKKI 333 HI1003 1 out 1 60 0 9 0.00 36 MLIEKMHNLTNSKISKFILG DTYAGKSERRSNFSTRFFKS 334 HI1128 1 out 1 58 9 9 10.36 41 MVYHNSMCTYLFYNKIGFGL VLFFTMLKPLGTRDEEAYIN 335 HI1131 1 out 1 107 0 9 0.00 43 MSENNKPRYPLQQILVEDLF IAISTLKMKVVSSEQEVEIR 336 HI1326 1 out 1 242 9 4 17.00 222 MMVNDDFQEYVKQLVTKHRD IAKTDLISIYRLFEIFLIKK 337 HI1329 1 out 1 103 0 9 0.87 55 MRKSRLSQHKQNKLIELFVA QGKSQYSGFSNEMQGLYRRC 338 HI1631 1 out 1 190 9 5 32.00 22 MEFSLQYITIFIFVILFLIG NYGKAELEFVGENLKRYLIK