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Transmembrane helices for ecoli (Escherichia coli)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
254G17868059in29|ali|phd|phdHtm|33441-4.2430,81,107,136,168,213,263,300,323MSGSVAVTRAIAVPGLLLLL
255G17880049in28|ali|phd|phdHtm|32624-2.6533,77,109,134,162,207,258,294,318MLTLARQQQRQNIRWLLCLS
256G17907419in27|ali|phd|phdHtm|33242-4.6532,80,108,137,170,215,265,301,324MTAIKHPVLLWGLPVAALII
257G17906789in18|ali|phd|phdHtm|32393-10.4518,53,90,119,170,219,252,274,299MITIGVFVLGYLYCLTQFPG
258G17901179in14|ali|phd|phdHtm|45540-4.29116,162,194,240,285,322,387,412,441MRTQVLLNRLKKHLFFKDVF
259G17893019in10|ali|phd|phdHtm|46251-5.7240,68,107,159,183,238,267,307,331MENKSARAKVQAFGGFLTAM
260G17887399in6|ali|phd|phdHtm|76840-4.4969,97,119,141,189,223,272,295,347MKASLDEKSATGWPPVCFAM
261G17871429in4|ali|phd|phdHtm|78010-1.3347,78,271,301,323,361,399,428,457MPRGTQNSHQTTAQQSCTLS
262G17870689in3|ali|phd|phdHtm|40230-3.2334,66,103,125,185,229,311,333,386MTVNSSRNALKRRTWALFMF
263G17887499in3|ali|phd|phdHtm|33232-3.7726,51,87,115,150,181,221,248,305MKLFRILDPFTLTLITVVLL
264G17865759in1|ali|phd|phdHtm|40660-6.2330,74,109,161,226,261,327,352,382MFKSFFPKPGTFFLSAFVWA
265G17876799in1|ali|phd|phdHtm|43019-1.0823,67,102,147,185,240,262,291,394MLQGAGWLLLLAPFFFFTYG
266G17879799in1|ali|phd|phdHtm|37011-1.2737,60,89,126,176,228,257,286,334MVNVRQPRDVAQILLSVLFL
267G17897789in1|ali|phd|phdHtm|42301-0.8362,105,151,187,237,300,327,380,417MLTGMTSLLAHRSAAVFHDG
268G17896719out26|ali|phd|phdHtm|368505.8157,91,119,142,181,217,248,311,351MMTKVLLSHPPRPASHNSSR
269G17901919out23|ali|phd|phdHtm|321434.4139,74,105,134,189,237,268,290,313MTTQTVSGRRYFTKAWLMEQ
270G17905249out23|ali|phd|phdHtm|326333.3743,77,113,142,193,242,273,296,318MGFTTRVKSEASEKKPFNFA
271G17896699out22|ali|phd|phdHtm|368505.9946,72,116,150,205,242,283,321,350MLSEVSMSHRRSTVKGSLSF
272G17888969out20|ali|phd|phdHtm|332737.9944,77,111,140,192,240,271,294,318MSASSLPLPQGKSVSLKQFV
273G17906779out19|ali|phd|phdHtm|341838.3642,80,114,143,196,243,277,299,323MMPQSLPDTTTPKRRFRWPT
274G17903339out18|ali|phd|phdHtm|485212.40160,199,247,286,319,361,400,423,465MAMESSLRIVAITNCPAGIA
275G17877939out15|ali|phd|phdHtm|3429311.5331,62,94,123,178,224,256,278,302MLKFIQNNREITALLAVVLL
276G17903869out13|ali|phd|phdHtm|359313.1239,77,117,158,190,232,271,293,329MNELVQILKNTRQHLMTGVS
277G17868539out12|ali|phd|phdHtm|370020.8439,64,93,126,167,198,293,325,355MTDNPNKKTFWDKVHLDPTM
278G17877949out11|ali|phd|phdHtm|3309310.1729,58,94,123,180,227,261,283,309MRIRYGWELALAALLVIEIV
279G17898449out10|ali|phd|phdHtm|33201-0.2630,52,76,124,153,196,246,279,316MTTLTLVLTAVGSVLLLLFL
280G17887299out8|ali|phd|phdHtm|415202.6563,118,179,214,252,292,338,363,397MAIKKRSATVVPGASGAAAA
281G17876999out5|ali|phd|phdHtm|3309011.3560,93,118,158,180,217,249,271,308MQSDKVLNLPAGYFGIVLGT
282G17880859out5|ali|phd|phdHtm|4919010.0651,75,110,142,178,214,259,286,318MIQSTRISMGLFFKYFLSLT
283G17899079out5|ali|phd|phdHtm|499828.4729,75,113,139,176,253,399,447,491MLHLFAGLDLHTGLLLLLAL
284G17874359out4|ali|phd|phdHtm|513202.0250,79,118,156,259,328,370,471,493MEISWGRALWRNFLGQSPDW
285G17882619out4|ali|phd|phdHtm|261414.7133,58,87,109,147,191,216,239,261MLQVTSEQWLSWLNLYFWPL
286G17894729out4|ali|phd|phdHtm|3219212.5026,60,105,129,153,221,254,282,306MNTVGTPLLWGGFAVVVAIM
287G17871009out2|ali|phd|phdHtm|315333.6035,66,96,142,167,202,224,260,312MCHRAFRLHLCKDWVFMFSG
288G17900929out2|ali|phd|phdHtm|3079116.7457,91,118,144,174,203,234,266,288MGSTRKGMLNVLIAAVLWGS
289G17903799out2|ali|phd|phdHtm|312212.3640,68,104,126,155,181,212,245,300MGERKLHTGSLMSAAGKSNP
290G17870719out1|ali|phd|phdHtm|561404.7728,50,79,110,178,400,424,496,553MNINVAELLNGNYILLLFVV
291G17874409out1|ali|phd|phdHtm|536808.3266,92,140,168,198,250,275,315,337MLAGVDGVGGIPFDNYPFAY
292G17878139out1|ali|phd|phdHtm|2669317.2422,51,73,101,126,163,196,229,253MLAGLRFMLVAFPAIFFVAR
293G17897579out1|ali|phd|phdHtm|696101.7742,81,104,129,151,431,453,475,505MWRRLIYHPDINYALRQTLV
294G17902529out1|ali|phd|phdHtm|300131.0738,61,97,126,158,201,236,261,292MSIPDGCKTNAAGRITRSCR
295G17901598in42|ali|phd|phdHtm|62520-2.03124,162,227,265,304,377,402,446MTELARKIVAGVGGADNIVS
296G17868048in25|ali|phd|phdHtm|33034-3.2030,79,122,165,211,262,297,320MIYVSRRLLITCLLLVSACV
297G17900278in22|ali|phd|phdHtm|63740-4.5439,67,103,157,181,265,306,332MSSDIKIKVQSFGRFLSNMV
298G17884928in21|ali|phd|phdHtm|56330-3.19254,291,330,369,404,446,507,546MKTLLIIDANLGQARAYMAK
299G17869518in16|ali|phd|phdHtm|65820-2.63335,375,415,453,490,531,591,638MVLFYRAHWRDYKNDQVRIM
300G17904658in8|ali|phd|phdHtm|51491-10.6137,59,90,302,336,389,439,504MDVIKKKHWWQSDALKWSVL
301G17869538in7|ali|phd|phdHtm|52390-9.6838,115,147,206,238,408,444,492MMLDIVELSRLQFALTAMYH
302G17883818in7|ali|phd|phdHtm|110520-2.9334,87,109,145,175,224,250,287MSKQSQHVLIALPHPLLHLV
303G17869548in6|ali|phd|phdHtm|37993-10.3827,89,142,183,224,281,312,357MIDYEVLRFIWWLLVGVLLI
304G17872128in6|ali|phd|phdHtm|51490-11.2237,114,147,206,236,407,442,492MWDVIDLSRWQFALTALYHF
305G17905568in6|ali|phd|phdHtm|32672-7.4134,57,114,142,171,208,247,295MSSDADAHKVGLIPVTLMVS
306G17898138in5|ali|phd|phdHtm|77391-9.82300,363,445,469,531,681,713,741MKKLTIGLIGNPNSGKTTLF
307G17872138in4|ali|phd|phdHtm|37893-10.1126,89,142,183,224,280,310,356MFDYETLRFIWWLLIGVILV
308G17898858in4|ali|phd|phdHtm|37622-2.4066,88,110,189,253,282,304,342MKISSKNQNIAGVTPATLNT
309G17871838in3|ali|phd|phdHtm|41793-11.3676,122,165,187,277,316,371,396MCEHHHAAKHILCSQCDMLV
310G17879338in3|ali|phd|phdHtm|67091-13.31105,135,172,406,430,452,478,510MNASSWSLRNLPWFRATLAQ
311G17886678in3|ali|phd|phdHtm|26940-4.9238,60,104,126,157,179,217,251METFNSLFMVSPLLLGVLFF
312G17903658in3|ali|phd|phdHtm|30842-4.0535,57,119,143,168,193,257,304MTEQQISRTQAWLESLRPKT
313G17877138in2|ali|phd|phdHtm|31311-1.8250,110,143,167,203,256,278,303MAMNVLQSPSRPGLGKVSGF
314G17896368in2|ali|phd|phdHtm|65530-3.0433,97,133,167,391,428,450,502MGIFSIANQHIRFAVKLATA
315G17863208in1|ali|phd|phdHtm|25672-7.9246,77,110,139,162,192,218,244MMHLYWVALKSIWAKEIHRF
316G17870338in1|ali|phd|phdHtm|29563-6.8029,59,104,136,167,198,225,277MPGSLRKMPVWLPIVILLVA
317G17871948in1|ali|phd|phdHtm|72011-1.1939,99,131,162,421,464,503,534MAFMLSPLLKRYTWNSAWLY
318G17872678in1|ali|phd|phdHtm|32893-10.7934,63,116,140,182,221,275,305MIPDYLTFIRFQDKRNLIYI
319G17873598in1|ali|phd|phdHtm|35752-6.0030,69,104,173,211,248,295,329MKQKELWINQIKGLCICLVV
320G17878858in1|ali|phd|phdHtm|34422-2.4737,59,83,161,219,248,276,316MAKPIITLNGLKIVIMLGML
321G17881378in1|ali|phd|phdHtm|42793-9.4995,141,175,205,287,331,375,406MALNTPQITPTKKITVRAIG
322G17895418in1|ali|phd|phdHtm|34612-1.7234,92,134,187,245,286,316,341MTGQSSSQAATPIQWWKPAL
323G17906558in1|ali|phd|phdHtm|32482-8.4028,53,142,177,217,255,281,309MPVMISGVLYALLAGLMWGL
324G17886188out191|ali|phd|phdHtm|325848.8634,100,130,172,202,257,285,321MSWISPELIEILLTILKAVV
325G17907408out28|ali|phd|phdHtm|31804-0.7923,71,114,156,201,252,288,311MKIALVIFITLALAGCALLS
326G17890778out21|ali|phd|phdHtm|307929.4622,83,113,153,189,243,272,307MSVLYPLIQALVLFAVAPLL
327G17888498out9|ali|phd|phdHtm|747111.4939,69,103,147,189,234,279,315MKLNATYIKIRDKWWGLPLF
328G17905788out9|ali|phd|phdHtm|565515.01189,229,261,314,344,381,407,430MAQRIFTLILLLCSTSVFAG
329G17862758out8|ali|phd|phdHtm|360131.3444,108,152,187,219,255,300,357MLVWLAEHLVKYYSGFNVFS
330G17888288out7|ali|phd|phdHtm|322848.4836,98,128,167,201,254,290,319MPSKEITMRQTLCDGYLVIF
331G17878738out6|ali|phd|phdHtm|2849414.6131,65,107,133,165,200,242,274MGNGWHEWPLVIFTVLGQCV
332G17866318out5|ali|phd|phdHtm|296111.9329,51,112,153,177,234,256,285MMFKQYLQVTKPGIIFGNLI
333G17871238out5|ali|phd|phdHtm|2879314.0831,65,107,133,169,204,243,268MGSGWHEWPLMIFTVFGQCV
334G17898668out5|ali|phd|phdHtm|308838.2841,64,87,122,174,225,257,297MSEQFLYFLQQMFNGVTLGS
335G17905098out4|ali|phd|phdHtm|318747.3335,76,112,167,200,240,277,310MTQTSAFHFESLVWDWPIAI
336G17873698out3|ali|phd|phdHtm|2759112.6920,78,109,131,159,211,233,261MIVTIVGWLVLFVFLPNLMI
337G17876778out3|ali|phd|phdHtm|298404.2224,68,113,150,182,237,259,298MLEKSLATLFALLILATLIN
338G17870068out1|ali|phd|phdHtm|318030.5631,67,105,147,183,230,253,299MSKSHPRWRLAKKILTWLFF
339G17879178out1|ali|phd|phdHtm|352111.4750,107,140,165,253,287,314,336MVFRIASSPYTHNQRQTSRI
340G17881458out1|ali|phd|phdHtm|2909414.9429,65,111,133,170,211,241,284MLAFTWIALRFIHFTSLMLV
341G17889648out1|ali|phd|phdHtm|2889011.6740,72,111,133,174,223,251,281MQRLEQRSPDAILLLFLIAQ
342G17894198out1|ali|phd|phdHtm|2579311.4925,56,78,125,156,188,213,253MSVPLILTILAGAATFIGAF
343G17866917in65|ali|phd|phdHtm|83440-4.98205,237,272,459,487,807,829MSQTIDLTLDGLSCGHCVKR
344G17893437in27|ali|phd|phdHtm|31013-1.7672,158,181,211,234,281,307MRLLIGPTDGESRDYLRWQT
345G17885047in20|ali|phd|phdHtm|36490-9.9229,155,196,244,303,325,350MGAYLIRRLLLVIPTLWAII
346G17869147in12|ali|phd|phdHtm|68290-11.9154,80,239,267,600,636,673MSRKQLALFEPTLVVQALKE
347G17875707in12|ali|phd|phdHtm|29353-5.0337,96,131,153,182,240,281MNRLFSGRSDMPFALLLLAP
348G17865647in9|ali|phd|phdHtm|27580-8.3644,105,150,172,213,235,257MSVLINEKLHSRRLKWRWPL
349G17871657in9|ali|phd|phdHtm|27860-6.6047,100,148,170,209,231,256MILSPVKSRKAKEEIMATPV
350G17901647in9|ali|phd|phdHtm|31921-2.9746,97,137,186,238,267,305MAATKPAFNPPGKKGDIIFS
351G17863727in8|ali|phd|phdHtm|24970-7.0637,70,101,132,186,208,248MLAAWEWGQLSGFTTRSQRV
352G17892517in7|ali|phd|phdHtm|27681-8.1539,98,149,187,209,243,274MALGAFTSFPVMMSLLGLAV
353G17881217in6|ali|phd|phdHtm|26635-3.7722,59,84,113,162,201,237MEITTLQIVLVFIVACIAGM
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
354G17881667in6|ali|phd|phdHtm|26105-0.6329,70,103,147,190,219,248MIELLFPGWLAGIMLACAAG
355G17872627in5|ali|phd|phdHtm|45292-9.4329,64,96,131,167,211,240MEKDYLRISSTVLVSLLFGL
356G17873687in5|ali|phd|phdHtm|26423-2.7929,84,121,145,192,218,248MIGRLLRGGFMTAIYAYLYI
357G17872267in4|ali|phd|phdHtm|35741-4.9754,93,115,175,197,222,331MAENKRTRWQRRPGTTGGKL
358G17892667in3|ali|phd|phdHtm|21995-12.5941,69,104,134,158,187,211MVQKPLIKQGYSLAEEIANS
359G17870117in2|ali|phd|phdHtm|37732-3.8548,201,257,283,310,337,366MSNPILSWRRVRALCVKETR
360G17893567in2|ali|phd|phdHtm|32532-3.0834,89,121,172,222,252,311MSALLGLLALSCAGKGMTPA
361G17898977in2|ali|phd|phdHtm|37552-5.6342,196,241,280,302,342,364MMRHLRNIFNLGIKELRSLL
362G17870107in1|ali|phd|phdHtm|36812-1.4043,192,243,272,302,326,357MFHRLWTLIRKELQSLLREP
363G17872537in1|ali|phd|phdHtm|24301-0.6823,58,105,136,165,198,231MDCVMWIGVLLAAALCLGLG
364G17893387in1|ali|phd|phdHtm|23592-11.9021,60,82,121,164,186,226MVIGPFINASAVLLGGVLGA
365G17905187in1|ali|phd|phdHtm|63630-3.3722,44,86,127,386,429,452MTFEIPFVALSLAVLFYGIQ
366G17906907out28|ali|phd|phdHtm|898313.15128,306,337,732,789,854,883MFKEIFTRLIRHLPSRLVHR
367G17897327out20|ali|phd|phdHtm|225000.5823,65,91,120,143,190,221MTMLLPLFILVGFIADYFVN
368G17887647out17|ali|phd|phdHtm|277202.2436,81,117,155,206,228,263MFAVSSRRVLPGFTLSLGTS
369G17883777out10|ali|phd|phdHtm|5499010.3751,92,120,170,192,223,247MPRFIHDRIVTFVIQRIGFV
370G17885057out9|ali|phd|phdHtm|341424.8741,64,163,203,225,279,326MSRLSPVNQARWARFRHNRR
371G17884647out6|ali|phd|phdHtm|2319311.6322,48,80,111,135,164,227MMANIWWSLPLTLIVFFAAR
372G17890337out6|ali|phd|phdHtm|354606.5986,115,148,170,220,286,322MADQNNPWDTTPAADSAAQS
373G17890367out6|ali|phd|phdHtm|305939.9234,66,90,149,221,271,293MLITASSQSLAMMILGTALT
374G17891977out6|ali|phd|phdHtm|2379313.7433,72,101,149,172,202,224MLFAWITDPNAWLALGTLTL
375G17870807out5|ali|phd|phdHtm|31703-0.1753,121,153,175,203,256,303MSTLEPAAQSKPPGGFKLWL
376G17894377out5|ali|phd|phdHtm|273939.2767,111,134,177,209,238,267MSDMHSLLIAAILGVVEGLT
377G17900787out5|ali|phd|phdHtm|223646.5938,63,100,123,148,183,207MTMRTNRYPARQIFRERTML
378G17888387out3|ali|phd|phdHtm|353535.4344,93,174,244,273,295,336MLEMLMQWYRRRFSDPEAIA
379G17891927out3|ali|phd|phdHtm|2919116.3238,80,118,146,219,241,278MTSSYLHFPEFDPVIFSIGP
380G17866997out2|ali|phd|phdHtm|268626.3437,72,94,121,144,214,246MPEKCRKHAMNSHNITNESL
381G17895287out2|ali|phd|phdHtm|267232.0828,50,92,117,164,199,228MHEITLLQGLSLAALVFVLG
382G17868787out1|ali|phd|phdHtm|5129117.0442,77,106,141,183,208,506MAFASLIERQRIRLLLALLF
383G17870057out1|ali|phd|phdHtm|237343.0340,73,104,126,155,177,227MESYSQNSNKLDFQHEARIL
384G17888307out1|ali|phd|phdHtm|216727.6229,58,80,115,145,173,196MTGSMIVNNLAGLMMLTSLF
385G17904517out1|ali|phd|phdHtm|54301-0.7995,118,153,193,216,259,291MLTLLHLLSAVALLVWGTHI
386G17908627out1|ali|phd|phdHtm|450606.9829,152,316,342,368,394,422MLKSPLFWKMTSLFGAVLLL

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