--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Escherichia coli --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 599 G1786654 3 in 77 593 7 1 -7.15 40,83,161 MRSFSQLWPTLKRLLAYGSP QLQLAGEELAASVREEESLS 600 G1788762 3 in 19 149 7 2 -7.09 21,73,128 MFSWPGMVLVTIFVTCPFVV MLQWRLENQEKRAQQEEHHE 601 G1788096 3 in 15 82 9 9 -12.07 19,51,74 MGILSWIIFGLIAGILAKWI SFVVAVIGAIVVLFIYRKIK 602 G1787445 3 in 13 84 8 9 -8.14 19,52,74 MGIIAWIIFDLIAGIIAKLI FLVAVVGAILVLGIFRLLRR 603 G1790272 3 in 10 154 6 9 -6.73 41,92,134 MSVEDTQPLITHLIELRKRL LASLPIPRRKGCRYPPTSPA 604 G1786783 3 in 9 480 7 0 -7.84 36,182,204 MVSKPFQRPFSLATRLTFFI KGTVAVTSDARGTRFVITLP 605 G1789834 3 in 8 97 9 8 -11.76 38,71,94 MERIMQNRKWILTSLVMTFF VGNVPEFCYVGYDGVGFAVI 606 G1789843 3 in 8 111 5 7 -5.49 33,63,108 MGLPIAITCFVLAAAVRIIQ METILGTVGAIVGMIAFQLL 607 G1786940 3 in 7 129 7 9 -7.46 46,84,129 MIRNVKKQRPVNLDLQTIRF SAKISFVITVVLSLLAGVLV 608 G1787894 3 in 7 433 9 0 -15.27 25,132,156 MKKLFIQFYLLLFVCFLVMS GGARFSFSWPLWHNIPQFTS 609 G1790594 3 in 6 119 7 9 -7.28 42,77,116 MINPNPKRSDEPVFWGLFGA WVFYGLAAILTVVTLIGVVT 610 G1789395 3 in 5 245 9 3 -10.95 24,111,180 MLYIFRLIITVIYSILVCVF MEQKIAELDKEVAEREAAGK 611 G1786632 3 in 4 109 3 9 -3.84 38,62,98 MSHSTDHSGASHGSVKTYMT AILVVGSIWIMWNLNYNMMM 612 G1787150 3 in 4 259 1 1 -1.59 31,56,192 MLFTLKKVIGNMLLPLPLML YETLGRIWQWLKGSSGEPRQ 613 G1787603 3 in 4 430 3 1 -3.20 42,138,257 MTWLFCDRIATKIDKNNGIS KRVDDALYRAKNDGRNRVLA 614 G1788720 3 in 4 80 9 9 -11.11 20,48,72 MINLWMFLALCIVCVSGYIG FMFLAPACGLMIRFMVGYGR 615 G1790413 3 in 4 127 3 6 -3.98 36,58,116 MSANTEAQGSGRGLEAMKWV ILWGLDGILVRLVSFITGLR 616 G1789106 3 in 3 107 6 8 -6.65 56,78,105 MRNSHNITLTNNDSLTEDEE IVFTLVTVGIMFGALFMWLL 617 G1789201 3 in 3 719 1 0 -1.69 57,279,433 MLFSFFRNLCRVLYRVRVTG SGKPDFVTLKSWVDEAEQHD 618 G1790257 3 in 3 128 9 1 -10.34 61,91,128 MAVSLLDGLPDATWCTEKRG WIDGFAGALFAGFGIHLIIS 619 G1790595 3 in 3 131 9 9 -16.10 50,85,129 MTTKRKPYVRPMTSTWWKKL KSLWAVTVVATIVILFVALY 620 G1786941 3 in 2 115 9 9 -13.49 39,76,110 MVSNASALGRNGVHDFILVR LVIVVALVVYVIYGFVVVWG 621 G1787173 3 in 2 356 2 1 -2.33 27,110,186 MQIIFGEKCVSLLRLFFAAV TGVPPETGRFEATATVRINF 622 G1787374 3 in 2 486 9 0 -9.17 39,187,216 MKKLLRLFFPLSLRVRFLLA MLGGARMEVIFGRQHSAPKD 623 G1789490 3 in 2 130 9 6 -10.61 42,72,103 MDWYLKVLKNYVGFRGRARR RKPLWTRSKTGTLKQICSPD 624 G1789491 3 in 2 118 3 9 -3.49 44,66,98 MQWYLSVLKNYVGFSGRARR FCTEGTSGSNRYGNDPKFGS 625 G1790110 3 in 2 115 9 5 -9.30 43,70,112 MKISRLGEAPDYRFSLANER IISLILMVVAVIVMGLVLYA 626 G1790258 3 in 2 138 6 2 -6.36 71,98,133 MIAFEVLKWAGAAYLIWLGI NKIFGSLFMLVGALLASARH 627 G1786562 3 in 1 339 7 0 -7.46 44,119,161 MNVFIPEYCSHNKTGEQTIM QGKVPAVANDYSQYVTSRFV 628 G1786620 3 in 1 172 7 9 -7.52 66,122,167 MTILPRHKDVAKSRLKMSNP GVISAGILYFIGHHWPLGIL 629 G1788020 3 in 1 178 9 7 -12.43 33,101,170 MTYQQAGRIAVLKRILGWVI YILPVICIAAGYVFFSLLGF 630 G1788023 3 in 1 200 5 1 -5.79 94,122,170 MSFIMTAEGHLLFSIACAVF SQMINTLQIQFHRLIKHQVE 631 G1788346 3 in 1 330 0 0 -0.77 52,87,274 MYFLNDLNFSRRDAGFKARK IRTGSYFRDVLEEVIDDLKT 632 G1789140 3 in 1 313 4 4 -4.39 41,218,267 MITNIKLPMPPSIYLSRFNE DSGGFSGGGGSSGGGGASGR 633 G1789404 3 in 1 110 9 5 -15.00 28,71,100 MLKQKIKTIFEALLYIMLTY SLGICLVCGWWLFWGRFIFC 634 G1789801 3 in 1 711 4 1 -4.00 21,231,359 MSTIVIFLAALLACSLLAGW QAYYESCLNPQLITPSESLI 635 G1789986 3 in 1 117 1 8 -1.79 36,84,107 MEIVMKTSKTVAKLLFVVGA VIYPIAFFVCLFGQMRLFRS 636 G1790111 3 in 1 149 2 4 -2.50 29,100,142 MGIIAQNKISSLGMLFGAIA IVCSILLIFLIFSFLTGGSL 637 G1790251 3 in 1 138 8 8 -8.50 59,103,128 MLTGDSYKDVKFMLRIFIPT LICYFSTFSMLMLAPTDSSK 638 G1790602 3 in 1 104 9 5 -13.59 24,72,95 MSARMFVLCCIWFIVAFLWI TALAIFGYWLWQFFLRYQFC 639 G1790707 3 in 1 204 3 8 -3.68 57,103,155 MVLYYSLVMSFLWSNTSFGI QPDKGFLASISRGVMPSLPF 640 G1790793 3 in 1 426 9 2 -11.71 39,68,417 MNKLIELRRAKRLALSLLLI CIGLILYLLSQLPALFPLGN 641 G1787105 3 out 150 648 1 2 1.64 541,600,626 MTPLLELKDIRRSYPAGDEQ FGWLPARNAARLDPVDALAR 642 G1786939 3 out 86 427 0 0 0.60 179,265,389 MADTKAKLTLNGDTAVELDV ARPRQLYTGYEKRDFKSDIK 643 G1788625 3 out 69 147 9 9 12.35 34,86,113 MSMSTSTEVIAHHWAFAIFL PARSRRERMNPETNSIANRQ 644 G1789673 3 out 13 256 1 1 1.69 42,111,198 MKCFTLSSQRRRIIGIPIFC SANNYVKWKDEYLDQGNQTQ 645 G1788055 3 out 9 208 0 0 0.20 60,109,182 MPVLDRHLHPRIKPLLHQCV WMTTFTRVWSGYLTLKSLQR 646 G1788300 3 out 9 359 3 0 3.23 193,272,341 MQILADLLNTIPAIDSTAMS MGELAASNIVLPGNTTSDLN 647 G1788123 3 out 8 152 7 6 7.37 25,76,98 MTITDLVLILFIAALLAFAI LIRVRNIDDLEKIYKLLVST 648 G1789381 3 out 8 244 9 5 15.43 42,155,194 MGNNLMQTDLSVWGMYQHAD LDLEASAAAHPVRVAQKLRA 649 G1786635 3 out 7 315 1 1 1.57 64,108,184 MRLRKYNKSLGWLSLFAGTV GEHSAHEGMEGMDMSHAESA 650 G1786842 3 out 7 127 0 2 0.04 53,83,118 MLQLLLAVFIGGGTGSVARW LLGSFAMTALAFWLFSASTA 651 G1786958 3 out 7 230 9 6 9.90 36,153,191 MTDMNILDLFLKASLLVKLI MEEFTAILHRQAFTVSESNK 652 G1788588 3 out 7 322 4 0 4.59 231,256,290 MFEIHPVKKVSVVIPVYNEQ VRARPRYFVQQVIRPSSKEN 653 G1790273 3 out 6 131 9 2 17.14 53,83,105 MVFPLAFGFLANTAPEGVQV GKGRNREEENDAEAESEKTE 654 G1787056 3 out 5 442 0 1 0.58 27,159,246 MSRINKFVLTVSLLIFIMIS MLADERLYKSKKNGRAQISW 655 G1787433 3 out 4 176 9 7 12.21 35,72,161 MLRFLNQCSQGRGAWLLMAF VAVLVVISQPFKAKKRDLFG 656 G1787616 3 out 4 203 5 2 5.34 45,77,108 MRLRVVPGFISPPPGFGGLG TEKYSHFMKLFWNSRSRRFN 657 G1786696 3 out 3 151 8 2 8.97 25,54,76 MELMVVHPHIFWLSLGGLLL GTHVEVIAIEGITLHIRAVS 658 G1786919 3 out 3 108 3 9 3.57 25,65,97 MKYIIFLFRAIWLALSLLIL LYFLSGGYIQWFVLSKRIIN 659 G1786956 3 out 3 97 1 4 1.06 37,65,97 MSKIIATLYAVMDKRPLRAL GIFCPLLADIVLIVGLIFFF 660 G1787273 3 out 3 179 8 5 8.35 89,134,156 MCSISFMAAFSAIMRGMNIL LWLAARSAKTAHREQEIKNK 661 G1787884 3 out 3 121 6 9 6.50 52,78,102 MYIYWILLGLAIATEITGTL LIKSGTRKARKPELEVNHGA 662 G1788463 3 out 3 132 2 9 2.59 39,77,112 MSKTLNIIWQYLRAFVLIYA SWSSQLVHGERKVVGQKGSE 663 G1789291 3 out 3 286 6 6 6.23 44,86,123 MEDLNVVDSINGAGSWLVAN ISFPYPQMDVNFKRVKEDKA 664 G1790266 3 out 3 475 3 0 3.89 22,324,356 MDFSIMVYAVIALVGVAIGW VPEQPNDEAYQRDDEYNQQS 665 G1790542 3 out 3 206 0 5 0.51 47,109,155 MPDAVQAPYPAYRPEPNMQT KAFAPPVPTSSKRSSTACCH 666 G1790555 3 out 3 122 9 7 12.41 51,83,105 MAGLIIVGILMTIFQLSSIS ALNYNRLHKNPYPLDAPISK 667 G1787094 3 out 2 486 1 0 1.85 169,264,471 MHSWRVKERDVPQRILVLGA HLFIFRGMAKQIARLAEQST 668 G1788773 3 out 2 151 0 0 -0.40 41,108,137 MKMKSTEFHPVHYDAHGRLR VALIWLLTNRRLRACFYEVK 669 G1790627 3 out 2 132 0 1 0.30 28,64,92 MHILDSLLAFSAYFFIGVAM GMFMGTAALAGGIFNAACMT 670 G1790825 3 out 2 108 9 9 19.11 28,58,96 MILMTSGLNIEWSTFMASML GALSIGLSIPGLWLYRKRPR 671 G1786781 3 out 1 745 9 1 20.00 30,381,415 MDWLLDVFATWLYGLKVIAI LLKAGLNTEQVAQLESENEG 672 G1787135 3 out 1 230 1 3 1.01 38,69,93 MKAFDLHRMAFDKVPFDFLG QLCPRCANPEWTKASRAKRV 673 G1787195 3 out 1 148 9 9 9.30 35,101,125 MRTVLNILNFVLGGFATTLG RVVSVETAQAAREANARRRF 674 G1788385 3 out 1 648 9 0 14.08 365,410,434 MKTNIKVFTSTGELTTLGRE MEPLRQAAEKLAQAQADLSR 675 G1789025 3 out 1 149 3 3 3.71 34,105,129 MFSPQSRLRHAVADTFAMVV GYFLDYCRRLFKVSRYQQVK 676 G1789039 3 out 1 111 0 0 -0.52 58,87,109 MSYEVLLLGLLVGVANYCFR IIPTLLSALAYGLAWKVMAI 677 G1789985 3 out 1 146 5 7 5.24 31,95,121 MMDNKISTYSPAFSIVSWIA IRDAGINPPKETQVTQEEYS 678 G1790012 3 out 1 378 9 0 14.52 22,46,71 MDLLIILTYVAFAWAMFKIF SVMRKVLLRMTSWVHYLYLD 679 G1790024 3 out 1 378 9 0 14.52 22,46,71 MDLLIVLTYVALAWAVFKIF SVMRKVLLRMTSWMHYLYLD 680 G1790062 3 out 1 344 0 0 0.87 97,258,280 MRYHGDMLLTTPVISTLKQN IAATEKLLPEDAPSADRNAQ 681 G1790529 3 out 1 135 9 0 13.83 44,73,95 MPAPYPTSSPILIFHSPLFI RFISQPQKETLSTLIITHPC