--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Escherichia coli --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 5 G1788107 2 in 36 561 5 1 -5.74 103,274 MKKVWLNRYPADVPTEINPD VGKILRRELRDEARGKVDNK 6 G1789768 2 in 25 457 8 1 -8.97 54,343 MDHLPIFCQLRDRDCLIVGG SLIIIGRVVGLRDKLNWFSN 7 G1788872 2 in 24 456 0 0 -0.23 271,346 MPPSCNANHLAEKSWGCQLA EQWSAGATGLGVRTIANLLT 8 G1788331 2 in 22 434 1 1 -1.99 151,195 MSFNTIIDWNSCTAEQQRQL ERLTAHKNAVTLRVNALKEQ 9 G1788266 2 in 8 569 9 1 -11.24 46,382 MGVVRVQHETKMENQSWLKK DRRLYLAKQAGRNRVFASDN 10 G1786815 2 in 7 362 5 1 -5.63 125,175 MPHNPIRVVVGPANYFSHPG PVTLTPDTLRAAFKKVESFK 11 G1786593 2 in 6 348 4 0 -4.36 186,295 MNHSMIISTALSLNLAGMIT RKAKHGDSSGVRGAAWLWPQ 12 G1788015 2 in 5 471 0 0 -0.70 102,209 MQSPSDAIFCRHLSLQYALD AAINAISQSLSFSADEIKTY 13 G1788411 2 in 2 420 2 0 -2.85 224,295 MKTLIARHKAGEHIGICSVC HQLIMDKIYDVLRAYRYGCA 14 G1789520 2 in 2 426 4 0 -4.18 229,300 MKHLTEMVRQHKAGKTNGIY ELIINHIQDILAQYHTACEG 15 G1787027 2 in 1 335 1 2 -1.14 95,149 MGNDKRSQIFTLSRYAGILR RFIAWTFMNDEQRRRFVNRQ 16 G1788416 2 in 1 334 4 2 -4.28 185,302 MKTERILGALYGQALGDAMG QLDFNRYATALAKYRQQREA 17 G1790847 2 in 1 214 9 4 -14.44 30,181 MARTKLKFRLHRAVIVLFCL SPFLLTASKPVPEEEESEKK 18 G1790485 2 out 30 327 5 0 5.57 132,163 MATRIEFHKHGGPEVLQAVE AQRAHEILESRATQGSSLLI 19 G1786948 2 out 15 388 0 0 0.79 276,331 MNLHEYQAKQLFARYGLPAP IIAAKGLTDAAQQVVAAVEG 20 G1788549 2 out 11 608 1 1 1.00 33,209 MHYMKWIYPRRLRNQMILMA PGYGATFTLILPINPQGNQT 21 G1788116 2 out 5 454 9 1 17.95 301,330 MISLFDMFKVGIGPSSSHTV DMNAKYRETSRGGLAIKVQC 22 G1789498 2 out 5 275 9 2 19.52 122,151 MCDYNGLSISGLMMHNELAL DMNDKYRETSRGGLAIKVVC 23 G1789565 2 out 3 110 6 5 6.57 21,70 MYEALLVVFLIVAIGLVGLI PAKTEQTQPAAPAKPTSDIP 24 G1786198 2 out 1 370 1 2 1.71 103,353 MNYSHDNWSAILAHIGKPEE DDIIQPSLDFPPRSAGSEKK 25 G1787007 2 out 1 413 6 1 6.17 243,378 MKCSWREGNKIQLLENGEQY PAQPTMETQDRVETENTGVK 26 G1788161 2 out 1 323 9 0 14.50 41,152 METKKNNSEYIPEFDKSFRH LKTRKPGEIQPYKRKDLYPI 27 G1788370 2 out 1 405 3 1 4.00 110,337 MNILQFNVRLAEGGAAGVAL SRAAYSGQQMLEEYVNFYQN 28 G1789506 2 out 1 312 6 1 6.00 117,245 MSTILLPKTQHLVVFQEVIR ELAKEYSSYNGCRRRQLIEV 29 G1789772 2 out 1 347 1 2 1.13 172,326 MLSGENKMLDIDKSTVDFLV LSIYKDHNPDERRYYGGLVE 30 G1790053 2 out 1 357 9 0 13.23 275,297 MRLGTFHKKKRFYINKIKIN KDIDTETLTNSVKRLSCIDK 31 G1790313 2 out 1 418 1 0 1.25 72,411 MRIKGMKWFNTLSHNRWLEQ IPLAPGMAPAVAAGLLDINA