--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Escherichia coli --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 682 G1788548 2 in 87 933 4 1 -4.31 22,316 MFRALALVLWLLIAFSSVFY LDVIKQTLTLYAERVRKSRD 683 G1786527 2 in 60 389 2 0 -2.52 233,351 MSDTTILQNSTHVIKPKKSV RPSANYVGPEDRPFVALDKR 684 G1788195 2 in 45 553 6 1 -6.66 27,212 MINRIRVVTLLVMVLGVFAL EQPPAQPRLRIAEQDPNWET 685 G1788615 2 in 40 100 8 9 -8.56 36,80 MIPLQHGLILAAILFVLGLT LLQLHRRRQNLNIDSVSEMR 686 G1787690 2 in 39 546 6 1 -6.44 35,221 MNTTPSQRLGFLHHIRLVPL HKHSVSAEPRGAGEPVSFAT 687 G1788194 2 in 39 533 5 1 -5.01 27,209 MFNRIRISTTLFLILILCGI LEEHEVARHESVQLQIAPVV 688 G1786734 2 in 21 169 9 3 -9.96 85,138 MSSRNNPARVAIVMGSKSDW NDWRKAQTDEVLENPDPRGA 689 G1788869 2 in 21 334 3 1 -3.04 43,308 MRENLRYVIQYHAHTIRILV LYDGAWSEWGARADLPVEPV 690 G1788655 2 in 20 304 5 1 -5.68 134,227 MSWIERIKSNITPTRKASIP NPEAPREGVVVPPVPDQEPE 691 G1788208 2 in 18 86 9 9 -10.67 47,73 MTSGQPMTSIGYELIVISAC GLILLAAVIFDRYKQKAKRT 692 G1788260 2 in 18 89 5 9 -5.59 38,72 MTPESVMMMGTEAMKVALAL MLNLLLDYVRTLFTNLPYII 693 G1786221 2 in 17 522 7 1 -7.92 95,247 MDRGAMDIIGGQHLRQMWDD LEIRKDLPRNCSGKIIRKNL 694 G1789603 2 in 16 776 9 1 -13.92 43,73 MKQIRLLAQYYVDLMMKLGL KEEWRHDVEVLKAWVAKATK 695 G1787048 2 in 15 249 3 1 -3.35 56,210 MAELSDQEMLRYNRQIILRG MTCQFREMKLMRNPGCEVCG 696 G1789808 2 in 13 450 9 3 -11.56 36,179 MRRLRFSPRSSFARTLLLIV LSIRAWLPVPVTRAQGTTKE 697 G1790425 2 in 13 245 6 3 -6.17 47,200 MRYSRQILLDDIALDGQQKL SLALRRASGCPVCGGSNADP 698 G1790436 2 in 12 465 9 2 -15.27 34,221 MRFMQRSKDSLAKWLSAILP GKGSTFTLWLPVNITRKDPQ 699 G1788374 2 in 11 732 2 1 -2.06 63,457 MGAGIERRAGIRMTEKVKQH RRASAYQDYGYYEYEYKSDA 700 G1786600 2 in 10 431 9 1 -14.21 38,60 MLERLSWKRLVLELLLCCLP VGKGTRFSFVIPERLIAKNS 701 G1786662 2 in 10 518 7 2 -7.63 31,264 MLVRTRHLVGLISGVLILSV GWLYSKALPKEDFLRWAEQH 702 G1788864 2 in 10 337 9 9 -18.80 131,260 MNTEATHDQNEALTTGARLR RFIRTNQVARLTLNAEQSPA 703 G1788248 2 in 9 552 9 1 -12.23 42,469 MNATAAQTKSLEWLNRLRAN SDNDPRVVALVIRQWINNDH 704 G1786458 2 in 8 120 9 9 -11.22 49,103 MESLPGQIDKSLDEASLSLR FIFDWLIGESRTSRSKAKNQ 705 G1787055 2 in 8 782 3 1 -3.79 32,304 MLSLYEKIKIRLIILFLLAA YLYQKPMPFSAWDKSGKLVK 706 G1787779 2 in 8 304 3 0 -3.54 24,151 MGKTISIKVLFGIYLLLMAG TGNKVSAGTVQSVIGVTFIY 707 G1788993 2 in 8 66 6 9 -6.73 30,56 MAAGFIADTASLPLIVSNLV AIAATLIMLYLFFRRVIPAT 708 G1789403 2 in 8 449 9 2 -16.26 31,180 MKFTQRLSLRVRLTLIFLIL HGMNVEFGNAEQGGFEAKVS 709 G1789429 2 in 8 209 2 6 -2.21 85,117 MILFADYNTPYLFAISFVLL IICRLSATRYLAENNPWPQI 710 G1790475 2 in 8 122 5 9 -5.32 63,118 MANNTTGFTRIIKAAGYSWK VLIAIIVAVITWCILLWSHF 711 G1786278 2 in 7 355 4 2 -4.60 123,276 MSGQGKRLMVMAGGTGGHVF AASIPDATERVANEVSRVAR 712 G1788692 2 in 7 306 9 4 -10.27 249,282 MKISLVVPVFNEEEAIPIFY IGRTYIETKKRPKYIIKRVK 713 G1788748 2 in 7 308 4 1 -4.40 113,256 MNYSLKQLKVFVTVAQEKSF VVRDQGNALMAGREGDPLYQ 714 G1789020 2 in 7 52 3 9 -3.25 20,44 MGFWRIVITIILPPLGVLLG LLTLLGYIPGLIHAFWVQTR 715 G1790567 2 in 7 543 8 2 -8.48 39,204 MRHSLPYRMLRKRPMKLSTT EPGIFTQFFVQIPWDGERSN 716 G1788545 2 in 6 890 5 1 -5.64 37,327 MRQKETTATTRFSLLPGSIT KDVPGIEKYISDIDSYVKSL 717 G1788812 2 in 6 566 5 2 -5.77 32,170 MIVKRPVSASLARAFFYIVL GGGTLVSISFRSAEGEESQL 718 G1790271 2 in 6 261 4 4 -4.40 21,110 MVSVFGSYCIIAVIVVLLFG KPAADAEPKTAAPSPSSSDK 719 G1790346 2 in 6 457 2 2 -2.94 25,179 MIGSLTARIFAIFWLTLALV AEDSPLGGLRLVIWLPLYKR 720 G1790381 2 in 6 380 5 0 -5.18 136,187 MPHLALLISKGAIMDRIIQS QVYAALLVADQYGQRFLQEW 721 G1786984 2 in 5 338 4 1 -4.14 134,267 MQLKFLTASHPKSSLPFSGV DKDNLWTNIVERQRHALQEI 722 G1787074 2 in 5 95 9 9 -14.40 30,64 MRAIGKLPKGVLILEFIGMM LMNRPPQYSRSEREKDNDAN 723 G1787627 2 in 5 93 9 9 -9.50 28,67 MVALKFILLLYCFQVFFGAP DSLSPITRIVTVCAQRQDAQ 724 G1788956 2 in 5 408 6 4 -6.33 42,176 MMDNDNSLNKRPTFKRALRN QELADHNMYQAKHQRAEKLV 725 G1789022 2 in 5 174 9 3 -12.73 129,155 MALTTISPHDAQELIARGAK GISGFCGMARLLDKMPWNQR 726 G1789035 2 in 5 88 8 9 -8.56 30,67 MTKPNHELSPALIVLMSIAT PLGDMFERRRLIVSMTLLAA 727 G1789686 2 in 5 136 9 9 -16.19 39,94 MSIIKEFREFAMRGNVVDLA TKEEVLLTEIRDLLKEQNNR 728 G1790551 2 in 5 363 9 3 -11.37 32,87 MHFLRRPISLRQRLILTIGA ETSGTRAWVRLKKDQYVANQ 729 G1787474 2 in 4 598 6 1 -6.65 33,174 MLKRCLSPLTLVNQVALIVL EVVVTFIPEKTFTDVQGDTH 730 G1787777 2 in 4 65 4 2 -4.43 40,62 MHATTVKNKITQRDNYKEIM ISEMGRIARDLTHFIINSLQ 731 G1788923 2 in 4 159 8 7 -8.23 96,120 MIKEWATVVSWQNGQALVSC LSVALPPGLVRFETSSEDAS 732 G1788989 2 in 4 278 9 5 -16.01 70,110 MTVCVAWLKTRSSFRPYPIF YSHDGKLMGRLLIPSNPDNR 733 G1789310 2 in 4 83 9 9 -9.81 50,72 MVADPTTTLQVKNTGSLSVN ILRIYLLQFSAIVGYKTRRA 734 G1790541 2 in 4 73 2 2 -2.02 38,62 MMPLLISYSLYRFESNVRSA LIIVTVSLLDFLSQRLRKHF 735 G1786274 2 in 3 452 6 1 -7.00 194,298 MISVTLSQLTDILNGELQGA KGSRSAAMEEVVRALQENGT 736 G1786663 2 in 3 169 4 8 -4.35 65,88 MFPGKLQIPRRQTMTEIQRL VRKGELSFYDIFTLARAEST 737 G1786837 2 in 3 552 7 2 -7.56 38,199 MLQLNENKQFAFFQRLAFPL LFSIYIPKVKPNDSSINPID 738 G1788164 2 in 3 328 6 4 -6.06 33,59 MKCYNITLLIFITIIGRIML TSYSEFLSQLANQYASCLKG 739 G1788274 2 in 3 127 9 7 -9.14 68,114 MTGSSNVEKCDFYHIIVLSL ALLGSIAWYTRPRPARSRRY 740 G1789014 2 in 3 444 9 1 -9.98 44,417 MAISLTPLTTTRRISKRKGI NPGRTLRAARSVDALHAAFN 741 G1790249 2 in 3 316 9 4 -9.60 272,308 MLSAFQLENNRLTRLEVEES IIFMILAGLAPYLYFKRKNW 742 G1786730 2 in 2 333 1 0 -1.34 162,241 MNFIPCHHVNAVGPMGGITS RAPLACFEQALEALAESMGI 743 G1786794 2 in 2 82 5 9 -5.33 34,71 MKHPLETLTTAAGILLMAFL LGAIEYFVLRFIWRRWFSLA 744 G1787366 2 in 2 156 9 8 -21.87 31,142 MWLMSQDSKVFFRIFLGIGL VGLLISMPSSKKSRRKRKSR 745 G1787456 2 in 2 92 9 9 -28.02 28,58 MKRKNASLLGNVLMGLGLVV RYWWVRHYDKRCRRSDNRRH 746 G1788086 2 in 2 556 3 2 -4.00 87,389 MQKYSEPCFLRGFCIQFITI DAYKASDERLYVNKQNKNSR 747 G1788908 2 in 2 496 5 2 -5.52 52,219 MLYLNFPSVSIRLFASDESN VDESGQDVCFRIELPSSKNT 748 G1789216 2 in 2 458 2 0 -2.22 57,354 MDLENKFSYHFLEGLTLTED SHRVIIDNILKLKQLTRICM 749 G1789650 2 in 2 646 9 1 -10.42 31,155 MRLTTKFSAFVTLLTGLTIF FFASSQPLDTNVKKYSQRYS 750 G1789655 2 in 2 80 7 9 -7.61 36,66 MDTRFVQAHKEARWALGLTL LCWAMVKFIYRDIPLEDDDA 751 G1790504 2 in 2 104 9 9 -9.48 48,83 MNGTIYQRIEDNAHFRELVE WRANGEFDRLNNEVLHEVQA 752 G1786411 2 in 1 112 9 0 -15.38 50,72 MSSERDLVNFLGDFSMDVAK DKWKRENMTPFMYVLNTPPV 753 G1786481 2 in 1 204 7 3 -7.42 34,118 MNIFEQTPPNRRRYGLAAFI RDLRNRITHEPDPEIPLGSN 754 G1786502 2 in 1 222 9 6 -10.51 41,206 MREQIKQDIDLIEILFYLKK ISVMFCLVKKMVDEYQQNSG 755 G1786577 2 in 1 102 1 9 -1.01 46,91 MADFTLSKSLFSGKYRNASS LVGCLIFAVVALWLHWRHRR 756 G1786578 2 in 1 114 1 8 -1.79 75,101 MNLRCESQNGNLKLNLLTIT ISFWLAGLIIRRRDEETENA 757 G1786847 2 in 1 266 2 3 -2.13 89,212 MLNLTPSAISQSIQKLRVIF NKFSLRDPILHGVIDVIRNA 758 G1787593 2 in 1 85 9 9 -18.65 40,77 MIMAKLKSAKGKKFLFGLLA LVFTVLLAIPLGIYFLGGEE 759 G1787604 2 in 1 327 9 4 -13.64 289,319 MEAIKGSDVNVPDAVFAWML CILLVVLIGGVALWLHRSKW 760 G1787727 2 in 1 70 2 9 -2.21 18,54 MVCFLIYITLLFIQRVYFIS DMLGVGDAININTNKNIRQV 761 G1787931 2 in 1 78 4 9 -4.54 45,76 MKFMLNATGLPLQDLVFGAS LMDLSLFAICVCLALAILIA 762 G1788279 2 in 1 452 8 3 -8.22 29,179 MKRLSITVRLTLLFILLLSV SATYHYLNKHNVFRITLPQR 763 G1788371 2 in 1 162 6 1 -6.45 57,134 MLEDLRANSWSLRPCCMVLA LDSVPDNALVVGEKARVKVI 764 G1788632 2 in 1 151 1 5 -1.07 63,85 MSTPDNRSVNFFSLFRRGQH ALADTLKRAFKQLDKTFLDD 765 G1788735 2 in 1 114 3 9 -3.38 36,80 MKSPYCHQSNYKLAIAIITV STMPDATLVRLIRPTNRLFN 766 G1788793 2 in 1 467 5 0 -5.83 327,393 MNTRQLLSVGIDIGTTTTQV GTPLFGGSVVPVTVKSLAFP 767 G1789159 2 in 1 454 8 2 -8.00 109,265 MITHISPLGSMDMLSQLEVD VAQHRMKLPGSAYIPCYEIC 768 G1789177 2 in 1 268 8 3 -8.61 50,257 MSVVISDAWRQRFGGTARLY FGFVAVSHALKKMMAKAARQ 769 G1789486 2 in 1 134 6 9 -6.20 73,102 MADTHHAQGPGKSVLGIGQR RHTRHELANDRQLLEEESRE 770 G1789876 2 in 1 89 9 9 -19.15 22,46 MLINIGRLLMLCVWGFLILN RIFLFGVFELLAWQKKFKVK 771 G1789900 2 in 1 355 9 0 -17.00 29,292 MDKSKRHLAWWVVGLLAVAA AWVRVNEELPWPDDLVVRLP 772 G1790114 2 in 1 307 9 1 -10.00 48,181 MSIIRRRDIKMNGKLQSSDV YAPSAVLKNTDQHPTDASPH 773 G1790402 2 in 1 119 1 9 -1.82 45,81 MKQANQDRGTLLLALVAGLS SVIMVFWIGAKMRNRKQEVA 774 G1790484 2 in 1 150 9 9 -22.22 94,130 MKMPIKRVQTLMCWNTRSNW VIKAIKAPKVPKYQRYDRWR 775 G1790821 2 in 1 750 9 1 -11.67 33,81 MLIYAWKAGRNTWWFAATLT GHSPRKLGIGMVEIKVVERE 776 G1790175 2 out 33 79 9 9 9.54 30,74 MENLNMDLLYMAAAVMMGLA LVDAIPMIAVGLGLYVMFAV 777 G1788921 2 out 20 324 9 4 13.35 22,81 MANMFALILVIATLVTGILW FDKQEGEWPTGLRLSRIGGI 778 G1787333 2 out 16 317 4 0 5.00 125,317 MYTKIIGTGSYLPEQVRTNA QLVLLEAFGGGFTWGSALVR 779 G1789948 2 out 14 651 8 2 8.00 21,166 MAMVAAVVLVFVFIFCTVLL GFLFARPLPIEIFEESYLEE 780 G1787216 2 out 13 726 0 1 -0.32 51,445 MTTKNMNTPPGSTQENEIDL RASTAYSYGYNYYGYSYSEK 781 G1788393 2 out 11 467 0 1 -0.25 30,187 MKFWRPGITGKLFLAIFATC PFGGVSITVELPLERDLQRE 782 G1788522 2 out 8 350 9 3 11.29 119,167 MRFLLGVLMLMISGSALATI RAVIERSIAQAMQHLSPQES 783 G1787527 2 out 7 349 9 4 10.61 28,203 MELLSEYGLFLAKIVTVVLA AAESADRLLLRWWQRGQKPL 784 G1790177 2 out 7 130 7 8 7.89 62,111 MKNVMSVSLVSRNVARKLLL VTWVLVLVVQILAPAVINNK 785 G1790727 2 out 7 149 9 7 10.04 53,138 MQEEPGDCHQPHNPARTGSE VRVCAGIICQCMTIPYQPHR 786 G1790734 2 out 7 67 0 9 0.64 33,56 MDITPKYVGIASGLMNAGSA SVALLVIGIFLTFFMRPDKS 787 G1789161 2 out 6 455 9 1 18.07 301,330 MISVFDIFKIGIGPSSSHTV MNAKYRETSRGGLAMKIVAC 788 G1790056 2 out 6 338 5 0 5.72 55,123 MDSFPAIEIDKVKAWDFRLA HHYISGIIAGVCYLCRKYYR 789 G1786354 2 out 5 232 0 1 0.84 62,194 MKIGIIGAMEEEVTLLRDKI AVAAKQSSLMVESLVQKLAH 790 G1786369 2 out 5 398 1 0 1.21 116,354 MKQLTILGSTGSIGCSTLDV VLSVDANAREVARKEVMRLA 791 G1788339 2 out 5 338 0 3 0.57 62,326 MRTWKFPSVRVMMRVENNNV GGMVGAGIVLGRNALRNYNA 792 G1790057 2 out 5 339 7 0 7.00 57,125 MQQVFFQETEFLNSVIDYDH KHRYLKGFSNYLFYFIEKIK 793 G1786674 2 out 4 125 1 9 1.50 32,107 MQRIILIIIGWLAVVLGTLG LACLLFYMWRIPVIDEKQEK 794 G1788738 2 out 4 372 0 2 0.19 105,355 MPMNYSHDNWSAILAHIGKP DDIIQPSLDFPPRSAGSEKK 795 G1786514 2 out 3 472 0 0 -0.74 306,381 MSQSLFSQPLNVINVGIAMF VHPPFACFEKAILGWCERYG 796 G1787995 2 out 3 277 8 0 8.88 41,82 MDNAVDRHVFYISDGTAITA YSVEEIATKILDIMGLSRRM 797 G1788389 2 out 3 464 9 0 15.23 38,76 MLLLDACSQMCPSFRRFQTV SATTPEEKATSREYAKKGAR 798 G1790219 2 out 3 349 1 2 1.78 50,342 MMTQPMPGKPAEDAENELDI MWGIVGGLIGAGVALTRRCS 799 G1786709 2 out 2 86 2 3 2.38 29,75 MLAISSNLSKMIIFIFAIII VAVDISIYTNVEDDYFFLIF 800 G1786796 2 out 2 370 0 2 0.19 103,353 MNYSHDNWSAILAHIGKPEE DDIIQPSLDFPPRSAGSEKK 801 G1786820 2 out 2 300 1 0 1.65 170,248 MANLYDLKKFDLNLLVIFEC NKSSLNNLVFSRFIDRLNES 802 G1786869 2 out 2 483 0 0 0.23 132,477 MKTCWQILEIESTTQIDIIR KISLTVLVIGYALGKIAMLF 803 G1787385 2 out 2 297 7 3 7.00 81,166 MRSPICHLFSAINSSPFKIA GESFSSILGDLLCDISRLTS 804 G1787396 2 out 2 60 9 9 17.86 21,46 MIMLILAPLVGVLGALLLAY FWSWLVARYLDRTQSSVGGG 805 G1787502 2 out 2 486 9 2 13.33 26,60 MTTVYTLVSWLAILGYWLLI LKRPLWQRVAERLFYFFSPL 806 G1787535 2 out 2 102 9 9 13.27 20,64 MKYLLIFLLVLAIFVISVTL ENQLSPATDVAVVPHSSAAK 807 G1788357 2 out 2 406 2 1 2.66 131,335 MKVGFFLLKFPLSSETFVLN VEHDFNQQVINRELASLLQA 808 G1789638 2 out 2 90 5 9 5.37 48,87 MPFSAATDAENNNACSLFTT PALFNTALYCCLFYLISRLF 809 G1789960 2 out 2 559 3 2 3.96 59,146 MTQFTQNTAMPSSLWQYWRG IQYQDKPYVRLNGGDWVPYP 810 G1790109 2 out 2 120 0 0 -0.60 65,108 MPDSRKARRIADPGLQPERT LAILFAVTHIHQLIVFIERV 811 G1790240 2 out 2 161 1 4 1.76 52,83 MVAALFGCQPYLVQRLLAVD ASILTLTELKKTTNKPHCDS 812 G1786207 2 out 1 72 9 9 31.07 43,68 MCRHSLRSDGAGFYQLAGCE VLNRRLTLTAVQGILGRFSL 813 G1786346 2 out 1 296 1 2 1.80 59,286 MSGLPLISRRRLLTAMALSP GATLSAMHFVRVLDNAIGGK 814 G1786802 2 out 1 377 1 3 1.52 60,357 MSSLNIKQGSDAHFPDYPLA VLLRYAMASRKQDAMMADHL 815 G1786866 2 out 1 475 0 0 0.33 133,470 MKNCWKILDIEETTDVDIIR KIIFYIFIFAGLIGKILHLF 816 G1787258 2 out 1 137 2 8 2.69 41,74 MNNLIITTRQSPVRLLVDYV VHFTSQGQIKMVVSEKALVR 817 G1787388 2 out 1 103 6 3 6.54 59,92 MVNAAQRTRVKVEADNRPSV VATGALLCFVEKLTDRAGSI 818 G1787430 2 out 1 305 6 0 6.00 104,203 MIMTEIVADKTVEVVKNAIE NTCNEYQKRHGKKTLFEVPE 819 G1787716 2 out 1 82 9 9 13.33 49,80 MKKLDARQKMTHICARFIHL AFLVGATWPMSFPVALLFSL 820 G1788467 2 out 1 79 9 6 10.69 24,75 MDVQQFFVVAVFFLIPIFCF VAYIGFGILSIGMIVYLIFY 821 G1789430 2 out 1 553 7 9 7.32 30,72 MDDIVNSVPSWMFTAIIAVC GSLAALTSPLTSTTPVEEKA 822 G1789908 2 out 1 111 9 9 18.00 24,109 MISTVALFWALCVVCIVNMA ILTSALCGLVVVSLIALMIW 823 G1790000 2 out 1 332 7 0 7.50 175,241 MKVTFEQLKAAFNRVLISRG AENRRNGITVDDSVWAKIQA 824 G1790013 2 out 1 107 3 9 3.22 25,66 MFLDYFALGVLIFVFLVIFY LQQRIAGLEKQLADIKSSSA 825 G1790025 2 out 1 120 4 9 4.52 27,65 MFLNYFALGVLIFVFLVIFY SRLEHQLAAEKKTDYSTFPE 826 G1790234 2 out 1 398 9 2 28.74 21,60 MLKVLLLFVLLIAGIVVGPM EEAAAMRRDGLMLTLQNNPP 827 G1790250 2 out 1 126 9 9 34.18 72,101 MSKEYMNDGSLSEKWKYRFN AVNTNKWFYEKEVKGLNTWS 828 G1790495 2 out 1 116 3 8 3.97 49,86 MYHASREQRRAVQGIGSFQR IESVMIEEMNQTPPQWPMIL 829 G1790699 2 out 1 54 9 9 100.00 27,53 MLSVLLKLLIILVLTPRAST SMNTSVRKLFRLPIFFVMIV 830 G1790861 2 out 1 474 0 2 0.35 27,205 MRIGMRLLLGYFLLVAVAAW TLRNVQEGGVLASLRLHRHF