--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Escherichia coli --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 32 G1790679 1 in 60 332 2 2 -2.00 173 MKTLGEFIVEKQHEFSHATG FVGNDHMVEDVERFIREFPD 33 G1786765 1 in 46 375 6 2 -6.80 43 MNIYRAVTSFFNNSSKKGLT YKINLLDKNDFTKEGANKSL 34 G1787171 1 in 34 233 7 4 -7.26 28 MKTCITKGIVTVSLTAILLS SVTYRTINDYGAETPQLNCK 35 G1786810 1 in 23 536 0 1 -0.40 102 MSIPFTRWPEEFARRYREKG TAVGKVDKKQLRQWLASRAS 36 G1787175 1 in 19 187 9 4 -24.64 37 MRRRFSILIWFTSEGVMLKR VNSDVQSGKVNASATFVLHY 37 G1789426 1 in 15 252 9 3 -9.24 30 MKLMRYLNTKNIIAAGVLLS YEINCPVVNNICNISVANRD 38 G1789725 1 in 13 145 7 7 -7.20 31 MRATDKQRGFTLLEIMVVIV PDGEMGTEDDITNWGLSKKK 39 G1789791 1 in 11 362 5 2 -5.76 123 MERIVVTLGERSYPITIASG EVRSGVSHELVLNAIADCQS 40 G1789513 1 in 10 299 2 3 -3.00 194 MIDMTMKVGFIGLGIMGKPM TADHSALACYYEKLAKVEVT 41 G1789634 1 in 10 104 4 7 -4.27 37 MGHETKAQLKDYVEVKIMKI AYQITEARSGDTWHATAELY 42 G1786811 1 in 9 285 9 2 -14.40 165 MAIPKLQAYALPESHDIPQN VMLAKNPTIDAWWKLLSREV 43 G1789729 1 in 9 327 9 3 -9.72 27 MNNEQRGVALLIVLMLLALM HIFFNRKQQSAQIYRRTLQL 44 G1790526 1 in 9 311 1 3 -1.92 33 MNKYLKYFSGTLVGLMLSTS KVIPLDKAPEFKLVDSILVT 45 G1790775 1 in 8 300 5 3 -5.40 149 MKRVITLFAVLLMGWSVNAW TGGQVTAGNVQSIIGVTFVY 46 G1787356 1 in 7 320 9 2 -24.19 29 MMIKTRFSRWLTFFTFAAAV MDVRSGMPVDVRRHQVSPQT 47 G1789726 1 in 6 169 0 6 -1.00 29 MNQQRGFTLLEMMLVLALVA LTLVCSGSWPLDQTLARDTR 48 G1788138 1 in 5 879 9 1 -9.67 42 MHMSQETPASTTEAQIKNKR HFLLQESEPKEWREWGTALP 49 G1788304 1 in 5 139 2 7 -2.65 35 MYFVLMRDEMLYNIPCRIYI RHLLSLNPLQARCRRYSRGE 50 G1790605 1 in 5 337 8 3 -8.00 128 MNANHQRRLKTSKEKPDYDD HRILESMAQVKTRKNFSDTD 51 G1790513 1 in 3 198 9 4 -13.95 29 MKQPKIPVKMLTTLTILMVF VNRTQLVESINMAKLLQRRL 52 G1788254 1 in 2 154 9 5 -20.57 32 MTDYAISKKSKRSLWIPILV LVAGQPKQDVTDVLYTAFIL 53 G1788561 1 in 2 578 9 1 -16.69 47 MAVPVKNGWLYTRNVAMSGE KLAQMEPGAAWQWLPITWQP 54 G1789727 1 in 2 138 2 7 -2.63 41 MAPGSNARQRYPPMNKQSGM QTTSLTRYQSIDNKSGQAQD 55 G1790651 1 in 2 224 7 4 -7.63 60 MIEEQDAEQEETMPGRFELK TGNNQQVLFTRQPDGSFIRA 56 G1786935 1 in 1 362 3 2 -3.14 32 MPFTSSGGEMSAGKGLLLVI PGTPIEAGPFDTVVLFKINY 57 G1787124 1 in 1 208 9 3 -10.00 128 MTKPYVRLDKNDAAVLLVDH SNHIPDYRNLMTSYDTLTKQ 58 G1787168 1 in 1 191 7 4 -8.00 122 MRVITLAGSPRFPSRSSSLL ALHRRDVQVPDLLSLRGNAH 59 G1788103 1 in 1 374 8 2 -8.00 281 MSNLSPDFVLPENFCANPQE SGISEHGIAHFHNLLAQVFK 60 G1788426 1 in 1 344 9 2 -25.00 22 MEIRIMLFILMMMVMPVSYA DTNKVKSGALEATALINVKY 61 G1788440 1 in 1 378 4 2 -4.00 252 MSELNDLLTTRELQRWRLIL AQIAAMTPGELASWLAENLQ 62 G1788586 1 in 1 200 6 4 -6.18 29 MLAFCRSSLKSKKYIIILLA DGLVMHVEKGKVYLDGEFVN 63 G1788851 1 in 1 63 9 9 -14.27 37 MSQATSMRKRHRFNSRMTRI HHQSKKEAQQSTLSVESPVQ 64 G1789495 1 in 1 188 7 5 -8.00 91 MIRTSAASDARMGGATLPAM ASHSMQQTDRQIIEIMASKA 65 G1789731 1 in 1 161 3 6 -3.23 44 MDSKELREMIKSWWAEKSTS QFTLAGNEEITLRHLSFREQ 66 G1790125 1 in 1 361 4 2 -4.00 294 MMNVSEKMEHFDVAIIGLGP APALRKWIMRSGVAHIPQLK 67 G1790311 1 in 1 308 4 2 -4.00 139 MSLIKVPCMQITNMHCSGQT LLLLESGKPHRLFFNIYGQR 68 G1790648 1 in 1 264 2 3 -2.00 201 MTLPTTIYSFPAYLSRFSST TPANHPDLWTQENGEWIYLR 69 G1790781 1 in 1 276 2 3 -2.00 213 MSMPLSNALQSQIITDAHFL QPSSLPELFELKNGEWNYIG 70 G1790792 1 in 1 390 8 2 -8.65 64 MVRGRKIMSLVTDLPAIFDQ DYSTSDVGQLSTRVAAFIEM 71 G1789632 1 out 59 312 4 3 4.84 129 MKVAVLGAAGGIGQALALLL LEGMLDTLKKDIALGEEFVN 72 G1786993 1 out 35 384 9 2 11.92 276 MSWQEKINAALDARRAADAL LTAAHEMQDIDRLLEVLHGN 73 G1787206 1 out 34 372 9 2 12.03 346 MNNEETFYQAMRRQGVTRRS RRHNQQPTETEHQPGNEDKQ 74 G1789370 1 out 27 328 7 2 7.12 312 MNRRNFIKAASCGALLTGAL TVLVRRNTKNDHHDGGDDHE 75 G1786936 1 out 26 242 3 3 3.51 22 MTFIKGLPLMLLTISLGCNA ALRMTTLNCSGQCRLQAVEA 76 G1786258 1 out 22 201 1 3 1.20 114 MAEKFIKHTGLVVPLDAANV LTLQHDDAIAAYEAKQPAFM 77 G1788669 1 out 21 361 2 2 2.77 344 MAGNTIGQLFRVTTFGESHG MDHLLRQRAQNADVKTDIPR 78 G1789505 1 out 21 329 2 2 2.16 199 MHITYDLPVAIDDIIEAKQR IISGGNIDLSRVSQITGFVD 79 G1789383 1 out 17 395 0 2 0.80 98 MADKKLDTQLVNAGRSKKYT IGLEDVDDLIADLDAGFARI 80 G1786995 1 out 16 225 5 3 5.16 159 MSKRYFVTGTDTEVGKTVAS PWLAENPENAATGKYINLAL 81 G1790446 1 out 16 578 4 1 4.52 264 MPRGLELLIAQTILQGFDAQ EDVYAYRRRQRFSVRYGEML 82 G1788104 1 out 14 321 4 2 4.00 131 MSDYQMFEVQVSQVEPLTEQ SQQSMLICCSRAKGKRLVLD 83 G1788345 1 out 12 196 9 4 9.68 161 MILKLAKRYGLCGFIRLVRD AGVPAKIIKKYNHETKLWEK 84 G1790400 1 out 11 444 1 2 2.00 174 MGLVKQGARVAVIERYQNVG NYPTMAEAYRVAALNGLNRL 85 G1788262 1 out 9 207 6 5 7.00 94 MSTIIMDLCSYTRLGLTGYL VIYHVVRLTDNVTNGIFVNM 86 G1786693 1 out 7 310 7 3 7.11 276 MLDANKLQQAVDQAYTQFHS VRGQKMVASVAKQLGYNVFK 87 G1786845 1 out 7 67 9 9 20.56 22 MGEISITKLLVVAALVVLLF DAAAKKGADVDLQAEKLSHK 88 G1790623 1 out 6 243 9 4 12.60 233 MSEMIYGIHAVQALLERAPE SSLNVSVATGICLFEAVRQR 89 G1786493 1 out 4 89 4 8 4.27 47 MQVFFHCEHPYLYNTAVAVE LVENAITPDNSVANKTDFLN 90 G1787075 1 out 4 240 2 3 2.80 124 MTPTIELICGHRSIRHFTDE IIKESRPFILDYLHKQGWAT 91 G1788109 1 out 4 231 4 3 4.00 96 MRILAIDTATEACSVALWND EHAEPVYLRNNVAWKKLPGK 92 G1789469 1 out 4 221 0 4 0.46 199 MEYPRVMIRFAVIGTNWITR PKSVQATASLLASGVDRRAW 93 G1789667 1 out 4 73 9 9 42.59 71 MKRLIPVALLTALLAGCAHD AIAGGAAAVAGLTMGIIALS 94 G1786830 1 out 3 292 0 2 0.64 130 MSMPATSTKTTKLATSLIDE RNLSPGGSADLLILTWFLAQ 95 G1789442 1 out 3 303 9 3 19.32 207 MMSESNKQQAVNKLTEIVAN GTLLVHADLTFENLSHTRSA 96 G1790409 1 out 3 316 0 2 0.08 104 MSIKEQTLMTPYLQFDRNQW RASLILTKSANHAVEEVRLR 97 G1787083 1 out 2 375 6 2 6.00 109 MQCALYDAGRCRSCQWIMQP QLFDMFPHTAHYEVLTLLVK 98 G1788824 1 out 2 212 9 3 12.00 88 MLYACFFYAFLKNNSPLKGI NAQGSINVVNYSQHDEQDGV 99 G1790833 1 out 2 225 0 3 0.00 108 MKWDWIFFDADETLFTFDSF GIAPTWTVSSLHELEQLLCK 100 G1786193 1 out 1 237 9 4 12.00 227 MNVNYLNDSDLDFLQHCSEE VTIPAVLQIACLRRMVSATQ 101 G1786519 1 out 1 271 7 3 7.05 229 MISLKAPHNNLMPYTQQSIL VQELGDRYYPVNKHVKIRYT 102 G1786795 1 out 1 372 8 2 8.00 166 MPLPDFHVSEPFTLGIELEM VADGGSLIGLVKKHCEIWAG 103 G1787409 1 out 1 243 9 3 10.00 155 MAYYSIGDVAERCGINPVTL RQNELLQHWGEQGYKVIFHA 104 G1787574 1 out 1 351 0 3 0.00 203 MKSAMTSSPLRVAIIGAGQV IIQQLVAALYQSAETGTRVE 105 G1788051 1 out 1 389 0 2 0.00 319 MMRHCGWLLGLLSLFSLATH EPHAGWVNALEQEWLHRYGT 106 G1788580 1 out 1 405 4 2 4.00 155 MENIMTLPKIKQVRAWFTGG DKPGFGVELNRDCNLKRPYS 107 G1788770 1 out 1 463 8 2 8.55 47 MLAGFWWHGFAGLFSPRSLA QLPIATYGWVVDQVYAALKQ 108 G1789299 1 out 1 329 9 2 10.00 103 MGLPSGYSAGYSYEYFGGNA NEQAEKYLLAQFGVDIGEAA 109 G1789409 1 out 1 193 4 4 4.00 90 MSTLLYLHGFNSSPRSAKAS AFTGFEDYFNPIVDFLGLHH 110 G1789487 1 out 1 99 0 8 0.38 66 MSSKVERERRKAQLLSQIQQ FGVWSAWRLVKTTLKQQQLR 111 G1789779 1 out 1 130 9 6 9.22 84 MKIPLNFSNKDRLMKKIGVA AFGLSVEHVEHAIPMLINHL 112 G1789782 1 out 1 387 2 2 2.00 357 MFVEALKRQNPALISAALSL IHRGEPEIVGRYDSLGNSLG 113 G1789826 1 out 1 146 9 5 10.06 112 MMKRMIALDGAQGEGGGQIL DNPSAPPRILSAGCWSRCWR 114 G1790314 1 out 1 292 3 3 3.15 259 MNKYTINDITRASGGFAMLA VCAPKLQQLGDIVDEMMAKR 115 G1790733 1 out 1 124 2 8 2.74 37 MPKAIGEIMSATAEPAFINP VAMLKPEPPRDPHIPLMGDF