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Transmembrane helices for ecoli (Escherichia coli)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
831G17890151in151|ali|phd|phdHtm|48212-1.80172MKLNDSNLFRQQALINGEWL
832G17876501in146|ali|phd|phdHtm|50012-1.28191MMTEPHVAVLSQVQQFLDRQ
833G17865041in145|ali|phd|phdHtm|49012-1.12168MSRMAEQQLYIHGGYTSATS
834G17877151in140|ali|phd|phdHtm|47412-1.64165MQHKLLINGELVSGEGEKQP
835G17876841in137|ali|phd|phdHtm|47912-1.72168MSVPVQHPMYIDGQFVTWRG
836G17862971in80|ali|phd|phdHtm|14648-4.7129MDKQRGFTLIELMVVIGIIA
837G17891911in64|ali|phd|phdHtm|26443-4.76191MKQYLELMQKVLDEGTQKND
838G17907711in43|ali|phd|phdHtm|24165-6.4936MSNKNVNVRKSQEITFCLLA
839G17863331in41|ali|phd|phdHtm|24673-7.1028MFFNTKHTTALCFVTCMAFS
840G17862721in39|ali|phd|phdHtm|58892-10.4043MKAAAKTQKPKRQEEHANFI
841G17877491in39|ali|phd|phdHtm|29473-7.99277MAMETQDIIKRSATNSITPP
842G17903751in38|ali|phd|phdHtm|38622-2.2088MTRKQATIAVRSGLNDDEQY
843G17867431in37|ali|phd|phdHtm|23064-6.7628MMTKIKLLMLIIFYLIISAS
844G17876591in37|ali|phd|phdHtm|25523-2.96114MSELIVSRQQRVLLLTLNRP
845G17880421in36|ali|phd|phdHtm|49212-1.88160MTLWINGDWITGQGASRVKR
846G17907701in35|ali|phd|phdHtm|21595-13.3854MLLMRMRPSRFSINNLPRFR
847G17905051in31|ali|phd|phdHtm|65241-4.48161MSQIHKHTIPANIADRCLIN
848G17886771in30|ali|phd|phdHtm|25055-5.2331MSDLLCSAKLGAMTLALLLS
849G17884281in28|ali|phd|phdHtm|23915-1.9036MAAIPWRPFNLRGIKMKGLL
850G17862201in27|ali|phd|phdHtm|29742-4.24153MKQQGTTLPANNHTLKQYAF
851G17865291in24|ali|phd|phdHtm|62842-4.40138MSFSEFYQRSINEPEQFWAE
852G17897991in24|ali|phd|phdHtm|85891-15.3136MKLNGKFPVKFVKYFLILAV
853G17876601in21|ali|phd|phdHtm|26244-4.80122MMEFILSHVEKGVMTLTLNR
854G17896011in19|ali|phd|phdHtm|24285-8.0332MSKSRLTVFSFVRRFLLRLM
855G17871761in17|ali|phd|phdHtm|24545-4.3235MPARHLYFIMTNTWNRLALL
856G17875051in16|ali|phd|phdHtm|23994-11.4732MTLDLPRRFPWPTLLSVCIH
857G17885971in15|ali|phd|phdHtm|28583-8.92144MIYPDEAMLYAPVEWHDCSE
858G17863431in14|ali|phd|phdHtm|84491-19.7285MAGNDREPIGRKGKPTRPVK
859G17872301in14|ali|phd|phdHtm|39093-24.7134MRKLWNALRRPSARWSVLAL
860G17894451in14|ali|phd|phdHtm|33733-3.4899MRVLGIETSCDETGIAIYDD
861G17864881in13|ali|phd|phdHtm|29553-5.3840MSHYKTGHKQPRFRYSVLAR
862G17880641in13|ali|phd|phdHtm|61891-12.0342MRTLWRFIAGFFKWTWRLLN
863G17874151in12|ali|phd|phdHtm|52192-11.0539MAFSCIKPFGRDKQMRNTLI
864G17885301in12|ali|phd|phdHtm|20096-21.2043MGNSDRKPGLIKRLWKWWRT
865G17891801in12|ali|phd|phdHtm|44732-3.7166MTDYASFAKVSGQISRLLVT
866G17861851in11|ali|phd|phdHtm|42842-4.36228MKLYNLKDHNEQVSFAQAVT
867G17885671in11|ali|phd|phdHtm|37623-2.88216MAYTTFSQTKNDQLKEPMFF
868G17890311in11|ali|phd|phdHtm|31962-6.64171MKLSRISAINWNKISDDKDL
869G17898701in11|ali|phd|phdHtm|38692-21.7944MLKNNITTHVITRRMGILRM
870G17878451in10|ali|phd|phdHtm|5199-13.0525MKQQKAMLIALIVICLTVIV
871G17879321in10|ali|phd|phdHtm|29994-14.4140MRLPCSGNTDCVVTMSIKTI
872G17903151in10|ali|phd|phdHtm|29823-2.56190MAAIAFIGLGQMGSPMASNL
873G17904961in10|ali|phd|phdHtm|52842-4.6730MSHRARHQLLALPGIIFLVL
874G17862001in9|ali|phd|phdHtm|6999-13.6544MLNTCRVPLTDRKVKEKRAM
875G17867691in9|ali|phd|phdHtm|15327-2.9223MSRVTAIISALIICIIVSLS
876G17872271in9|ali|phd|phdHtm|90451-5.32341MGFALMALLTLTSTLVGWYN
877G17890921in9|ali|phd|phdHtm|30223-2.72197MKTGSEFHVGIVGLGSMGMG
878G17885251in8|ali|phd|phdHtm|15997-24.2631MNIRRKNRLWIACAVLAGLA
879G17887111in8|ali|phd|phdHtm|38793-23.5736MEQINSNKKHSNRRKYFSLL
880G17890411in8|ali|phd|phdHtm|39093-18.1643MSANAETQTPQQPVKKSGKR
881G17900421in8|ali|phd|phdHtm|42792-12.6438MRGKAINTMTRAVKPRRFAI
882G17863621in7|ali|phd|phdHtm|27492-13.96131MQQLQNIIETAFERRAEITP
883G17885021in7|ali|phd|phdHtm|51882-8.0033MFIRAPNFGRKLLLTCIVAG
884G17889251in7|ali|phd|phdHtm|21695-13.96117MQKEQLSALMDGETLDSELL
885G17868541in6|ali|phd|phdHtm|63392-10.8640MKLQNSFRDYTAESALFVRR
886G17881981in6|ali|phd|phdHtm|30894-9.3049MKNQAHPIIVVKRRKAKSHG
887G17882971in6|ali|phd|phdHtm|30583-8.04239MNFRRLKYFVKIVDIGSLTQ
888G17905191in6|ali|phd|phdHtm|34393-22.1331MESTPKKAPRSKFPALLVVA
889G17867851in5|ali|phd|phdHtm|45761-6.56313MSPCKLLPFCVALALTGCSL
890G17881181in5|ali|phd|phdHtm|54292-14.0545MSPYAYRVARMQKAQRIIKT
891G17884661in5|ali|phd|phdHtm|23995-12.4325MLKRVFLSLLVLIGLLLLTV
892G17888671in5|ali|phd|phdHtm|77091-13.4332MPRLLTKRGCWITLAAAPFL
893G17894681in5|ali|phd|phdHtm|23095-12.2038MLRAFARLLLRICFSRRTLK
894G17896371in5|ali|phd|phdHtm|31094-16.0730MKTLIRKFSRTAITVVLVIL
895G17902621in5|ali|phd|phdHtm|31743-5.00238MIEVKHLKTLQALRNCGSLA
896G17864451in4|ali|phd|phdHtm|28522-2.0442MTQAERRHDRLAVRLSLIIS
897G17869591in4|ali|phd|phdHtm|14299-12.4538MARARGRGRRDLKSEINIVP
898G17869601in4|ali|phd|phdHtm|42193-26.6733MSKATEQNDKLKRAIIISAV
899G17869971in4|ali|phd|phdHtm|30233-3.48202MRNRTLADLDRVVALGGGHG
900G17870461in4|ali|phd|phdHtm|24484-8.00149MRQLFREFSRDSLHSDKKYI
901G17874651in4|ali|phd|phdHtm|26943-4.04122MRSLADFEFNKAPLCEGMIL
902G17889861in4|ali|phd|phdHtm|28914-1.91276MVMKNFEVLQPLQNSLSGLP
903G17897901in4|ali|phd|phdHtm|42893-26.00122MDEFKPEDELKPDPSDRRTG
904G17902131in4|ali|phd|phdHtm|49452-5.60282MGSTSSLYAAIDLGSNSFHM
905G17873391in3|ali|phd|phdHtm|34094-34.0022MKKVLLIILLLLVVLGIAAG
906G17875851in3|ali|phd|phdHtm|33593-12.00303MRLIRRPPRQQGVKMRTVKV
907G17881691in3|ali|phd|phdHtm|23344-4.7064MKKCVIKIYIAPPEKINFLC
908G17883081in3|ali|phd|phdHtm|23674-7.33221MIQLFRVVISEQIIDNSEPV
909G17888841in3|ali|phd|phdHtm|29394-13.8538MIKKSQGKVMALPVNKRVPK
910G17895401in3|ali|phd|phdHtm|19136-3.0028MKALSPIAVLISALLLQGCV
911G17896481in3|ali|phd|phdHtm|36783-8.8629MKPIFSRGPSLQIRLILAVL
912G17901561in3|ali|phd|phdHtm|40093-9.3333MVMELNERNITMNIKIAALT
913G17903521in3|ali|phd|phdHtm|25193-29.3223MKKAGLLFLVMIVIAVVAAG
914G17903821in3|ali|phd|phdHtm|22085-8.00125MELYLDTANVAEVERLARIF
915G17906171in3|ali|phd|phdHtm|33493-28.0022MRKSVIAIIIIVLVVLYMSV
916G17862711in2|ali|phd|phdHtm|12128-2.2454MISRVTEALSKVKGSMGSHE
917G17862811in2|ali|phd|phdHtm|27664-6.6742MSQAALNTRNSEEEVSSRRN
918G17863131in2|ali|phd|phdHtm|15695-10.1862MSIVLPLTGRSSRRHNLIDN
919G17863311in2|ali|phd|phdHtm|20394-18.7340MEFGVRFSNYKGRQMIKTTP
920G17869131in2|ali|phd|phdHtm|19087-8.5030MSGLRPALSTFIFLLLITGG
921G17875641in2|ali|phd|phdHtm|11989-8.9456MAGINLNKKLWRIPQQGMVR
922G17878781in2|ali|phd|phdHtm|40612-1.36336MVAENQPGHIDQIKQTNAGA
923G17879181in2|ali|phd|phdHtm|20694-17.0428MLKTIRKHGITLALFAAGST
924G17885981in2|ali|phd|phdHtm|25223-2.6898MILHAQAKHGKPGLPWLVFL
925G17899431in2|ali|phd|phdHtm|18397-13.3333MRKRTMSKAGKITAAISGAF
926G17901061in2|ali|phd|phdHtm|3299-10.0028MTTSMLNAKLLPTAPSAAVV
927G17901231in2|ali|phd|phdHtm|13587-8.9746MMMLFSARDRYNSSGQHPRS
928G17902351in2|ali|phd|phdHtm|39363-6.0654MTEQEKTSAVVEETREAVDT
929G17903681in2|ali|phd|phdHtm|31993-15.0551MAQRDYVRRSQPAPSRRKKS
930G17906671in2|ali|phd|phdHtm|125980-8.0028MSLWKKISLGVVIVILLLLG
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
931G17907831in2|ali|phd|phdHtm|30393-10.00126MDDCGAILHNIETKWLYDFL
932G17907901in2|ali|phd|phdHtm|32314-1.8565MVSGAALHITGFLRVKDSLR
933G17908561in2|ali|phd|phdHtm|21535-4.00165MLQVYLVRHGETQWNAERRI
934G17862181in1|ali|phd|phdHtm|16634-3.1127MKLHTIDISTILIWPCLIAS
935G17863291in1|ali|phd|phdHtm|19895-22.7731MHPTQRKLMKRIILFLSLLF
936G17863601in1|ali|phd|phdHtm|24794-10.8145MHYCEPGWFELIRHRLAFFK
937G17864031in1|ali|phd|phdHtm|26693-12.00164MRKNTYAMRYVAGQPAERIL
938G17864821in1|ali|phd|phdHtm|25193-10.0043MITAGLAKSALQERFMFRRR
939G17866451in1|ali|phd|phdHtm|62312-1.6931MMDSLRTAANSLVLKIIFGI
940G17867021in1|ali|phd|phdHtm|20853-5.0929MMNFNNVFRWHLPFLFLVLL
941G17871041in1|ali|phd|phdHtm|38093-32.9141MAYGVFRKFMKKRKTVKKRY
942G17872251in1|ali|phd|phdHtm|7699-17.2236MRRWISQNNIRLPRGAFFIS
943G17872361in1|ali|phd|phdHtm|41892-10.91359MGSNIHGISCTANNYLKQAW
944G17872971in1|ali|phd|phdHtm|4699-17.3943MRPFLQEYLMRRLLHYLINN
945G17874521in1|ali|phd|phdHtm|95591-16.6947MGIKQHNGNTKADRLAELKI
946G17875441in1|ali|phd|phdHtm|40143-4.00204MLSPIRLSPLPALRQDNDFL
947G17877291in1|ali|phd|phdHtm|16065-6.2925MLQIIRGKLVIFLITLCLFV
948G17881301in1|ali|phd|phdHtm|4799-35.1226MKKFRWVVLVVVVLACLLLW
949G17884901in1|ali|phd|phdHtm|31294-14.00130MSELKISPELLQISPEVQDA
950G17885131in1|ali|phd|phdHtm|33533-4.00120MSLDINQIALHQLIKRDEQN
951G17886071in1|ali|phd|phdHtm|32594-21.3324MHMKKIIFAFIILFVFLLPM
952G17888191in1|ali|phd|phdHtm|28793-10.1852MRWQGRRESDNVEDRRNSSG
953G17888851in1|ali|phd|phdHtm|43392-9.75409MLMGDLQMMPTLAPPSVLSA
954G17891281in1|ali|phd|phdHtm|29772-7.33252MAGLFTPKDAAMNIAIVTIN
955G17892131in1|ali|phd|phdHtm|26994-12.00172MYWIINDNIEFWPEHRKLIS
956G17893401in1|ali|phd|phdHtm|28694-16.00153MIHQQHMRNIAQWLQENGIT
957G17896211in1|ali|phd|phdHtm|26344-4.00201MGLMNAFDSQTEDSSPAIGR
958G17897191in1|ali|phd|phdHtm|13919-1.7951MFEFYIAAREQKETGHPGIF
959G17897201in1|ali|phd|phdHtm|48993-12.00269MSTRREVILSWLCEKRQTWR
960G17897211in1|ali|phd|phdHtm|27165-6.5338MPTLRFPFHLANHNKDAAIN
961G17897301in1|ali|phd|phdHtm|38893-20.00264MMPESLMVIRSSSTLRKHWE
962G17897961in1|ali|phd|phdHtm|17968-6.1840MNPPINFLPWRQQRRTAFLR
963G17899231in1|ali|phd|phdHtm|17697-12.00105MFLIITRDTMFFTAMKNILS
964G17900171in1|ali|phd|phdHtm|46342-4.00164MTTETRSLYSQLPAIDRLLR
965G17900541in1|ali|phd|phdHtm|28364-6.00183MKNIRYIDKKDVENLIENKI
966G17902481in1|ali|phd|phdHtm|16134-3.1432MAHQLLIGKGMITLNLKRIF
967G17906821in1|ali|phd|phdHtm|45092-10.00267MALAMKVISQVEAQRKILEE
968G17906951in1|ali|phd|phdHtm|11069-6.5775MSNTLNHTSSRQIVRHYTHR
969G17908291in1|ali|phd|phdHtm|26234-4.00111MAYRSAPLYEDVIWRTHLQP
970G17865521out180|ali|phd|phdHtm|369929.16209MKSRAAVAFAPGKPLEIVEI
971G17875581out155|ali|phd|phdHtm|49502-1.00184MNFHHLAYWQDKALSLAIEN
972G17878051out101|ali|phd|phdHtm|47002-0.72160MTHKGDTPMTITPATHAISI
973G17877531out72|ali|phd|phdHtm|346626.28194MQNIIRKGGTMKAAVVTKDH
974G17862411out45|ali|phd|phdHtm|2719411.6330MQYWGKIIGVAVALLMGGGF
975G17908151out45|ali|phd|phdHtm|551121.04213MLKRIKIVTSLLLVLAVFGL
976G17887131out42|ali|phd|phdHtm|11979016.00555MKFLPYIFLLCCGLWSTISF
977G17880731out36|ali|phd|phdHtm|347333.24192MKNSKAILQVPGTMKIISAE
978G17901161out32|ali|phd|phdHtm|1619815.1430MFSNHADMMLTQIAIGLCFT
979G17894531out30|ali|phd|phdHtm|506535.32195MSSHPYVTQQNTPLADDTTL
980G17866411out29|ali|phd|phdHtm|207949.48119MSYSGERDNFAPHMALVPMV
981G17903261out29|ali|phd|phdHtm|300141.08277MAYQSQDIIRRSATNGLTPA
982G17878791out26|ali|phd|phdHtm|297434.92249MNIELRHLRYFVAVAEELHF
983G17880751out24|ali|phd|phdHtm|358434.56197MKALARFGKAFGGYKMIDVP
984G17886201out22|ali|phd|phdHtm|445111.40132MKNIIRTPETHPLTWRLRDD
985G17888871out22|ali|phd|phdHtm|296525.63243MELRHLRYFVAVAQALNFTR
986G17900451out22|ali|phd|phdHtm|341636.64185MKALSKLKAEEGIWMTDVPV
987G17884071out21|ali|phd|phdHtm|346535.64184MKSVVNDTDGIVRVAESVIP
988G17865371out20|ali|phd|phdHtm|203141.73158MNMPMTERIRAGKLFTDMCE
989G17888071out20|ali|phd|phdHtm|316838.32176MNELDGIKQFTTVVADSGDI
990G17861891out19|ali|phd|phdHtm|317939.20176MTDKLTSLRQYTTVVADTGD
991G17865851out19|ali|phd|phdHtm|269434.28187MEKKIGFIGCGNMGKAILGG
992G17866641out19|ali|phd|phdHtm|183444.81157MSTEKEKMIAGELYRSADET
993G17878631out18|ali|phd|phdHtm|339838.88183MKSILIEKPNQLAIVEREIP
994G17888461out18|ali|phd|phdHtm|212030.7697MNIVVLISGNGSNLQAIIDA
995G17905761out17|ali|phd|phdHtm|512424.00177MQQPVVRVGEWLVTPSINQI
996G17907181out17|ali|phd|phdHtm|343040.72194MQVKTQSCVVAGKKTVAVTE
997G17863761out16|ali|phd|phdHtm|34102-0.32265MPSIRLADLAQQLDAELHGD
998G17862141out15|ali|phd|phdHtm|273040.60139MHDANIRVAIAGAGGRMGRQ
999G17863781out14|ali|phd|phdHtm|262131.00171MIDKSAFVHPTAIVEEGASI
1000G17878771out13|ali|phd|phdHtm|235434.96160MELVMLKRFFITGTDTSVGK
1001G17862641out12|ali|phd|phdHtm|373525.5034MTHSTAMDSVFIRTRIFMFS
1002G17868251out12|ali|phd|phdHtm|412535.92211MKALTYHGPHHVQVENVPDP
1003G17888951out12|ali|phd|phdHtm|364636.04210MKINRIVNEGFMKTMLAAYL
1004G17908191out11|ali|phd|phdHtm|345535.80190MESRIMSTMNVLICQQPKEL
1005G17866971unk10|ali|phd|phdHtm|305040.0019MLIFIPILIFVALVIVGAGV
1006G17901741out10|ali|phd|