--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 454 ae001862_57 1 in 91 495 2 2 -2.40 181 MTAEPQVSPAPTPPPAAPLL NGREFGRLGLEEFMEVKALQ 455 ae001863_64 1 in 89 477 1 3 -1.28 160 MTATPQASARPERPFATVNP FTNQKLVRAFPTKQKPAQVA 456 ae001862_120 1 in 85 487 1 3 -1.56 176 MTTTDLRTTYSSVTRSQAYF EGGHWGLEEYLETKFVSLGL 457 ae001913_1 1 in 36 314 1 4 -1.04 185 MLCGGTRGVVSKAVGPFPGQ GTGTGTGTGTGTGTGTGTGS 458 ae001905_1 1 in 19 642 0 2 -0.40 155 MDPALLTTPLVSPTDALKKT SLENPDALETVRERLGGAAA 459 ae001907_5 1 in 19 873 4 1 -4.73 69 MSRSSQGQPPAPTPVPAPNP RLPSPPPRPRRTAPTPGYRP 460 ae001863_107 1 in 18 270 1 5 -1.09 52 MSFLPAASVDREFRFSPGGP EDLKQIRPPVEREMTFGEDA 461 ae002076_6 1 in 17 649 1 2 -1.48 169 MTHPNDHIDAMLHETRVIHP GDTSTLEDPTVLERLQASPA 462 ae001978_9 1 in 16 203 9 6 -13.11 38 MPRVSEPPAPPSPLREFWRT AGPVAWRLWPAPGALARHTA 463 ae001986_6 1 in 16 1009 2 1 -2.80 36 MWYAPAPGGPALIFFLRFLK GGRILNAWEGTFQGTGLTKG 464 ae001987_4 1 in 16 269 6 5 -6.56 46 MGYPLPCMTRLDTPAKPAPS LNWRVLNRPPGFSAVPAPTT 465 ae002015_5 1 in 16 234 9 5 -18.84 30 MKRPAGVRRFWREWAGPVCW EKRVQLSGPVQWNPRWGFGG 466 ae001912_11 1 in 13 125 4 9 -4.22 29 MQKATEAFTLIELLVVMTII SALSQSGKTFTYDQGGFREI 467 ae001902_6 1 in 9 251 7 5 -7.76 35 MKMSQNRWTAGNALSWALGV TEAQLSAQQVADVHAYIKTL 468 ae001921_1 1 in 8 287 3 4 -3.08 100 MKDDPRPAPPPADPRTPRPP SIGMYPNKQIHIYPWGVSVQ 469 ae001973_7 1 in 8 87 2 9 -2.74 47 MKLPARVRVSRPPLPLAPAL RGRGIEEALAEILNPPVNQS 470 ae001932_7 1 in 7 219 9 6 -12.00 28 MKAIKLAPHYIFALVLTLCL AAAPAAGTPAPAAPAAGGTQ 471 ae001913_10 1 in 6 244 8 5 -8.00 68 MCKERLPLSARRARAFVTED ALVAPFDPELRASAAAGLLG 472 ae001863_52 1 in 5 489 5 2 -5.36 224 MSGDRRRTPMLRGMSPSSLL HGMCGVNAARTALADEFGFR 473 ae001895_1 1 in 5 168 9 7 -15.25 45 MTTAPSGLPGTPLPPARRRE GEGQYSQDDLKKILNDQSTK 474 ae001971_1 1 in 5 154 9 7 -12.20 30 MKDRGQSGMTLIELLVVIAI GDYEIRIVGVTGKVILAKAG 475 ae001826_6 1 in 4 217 3 6 -3.85 49 MTTPNANLQNSAPLPAERPT LGLLGEPRVNVLAVNLSLDG 476 ae002060_11 1 in 4 49 8 9 -8.88 36 MGRGAKWLPAALIALIFLVV PTAVVLALCFLAAVLSASQR 477 ae001826_119 1 in 3 71 2 9 -2.79 61 MHDEKSYHLSQSCVLQRNPH ALISLALFVYLLYSLLRPED 478 ae001862_3 1 in 3 443 9 2 -15.19 44 MGRRPSSSHKVSSGKISARP LLFTDDQSGVIYRVQYVGGQ 479 ae001863_39 1 in 3 294 1 3 -2.00 284 MTIRAGISIPRLQRWDAHVQ AACCAAVSWTAHGSSAPRPC 480 ae001881_3 1 in 3 222 9 5 -10.28 36 MGSASLTPVKTRIRWRRWAA VLDVLRGKGPKFLGEPVDVP 481 ae001990_6 1 in 3 675 0 1 -0.64 204 MVTGPVRFRFPLADPLAGRA VAAQPESTQLRFGVTYRIGG 482 ae002015_3 1 in 3 212 2 7 -2.60 38 MKKVLTAVLATAFLVAPVAV QMLNNAAQQLLLKVPASYYK 483 ae002084_5 1 in 3 343 0 3 -0.48 30 MTTLNSRRGLPLWAKLLLGL GGKIYVNHTYAEHLRDNDRY 484 ae001862_1 1 in 2 532 4 2 -4.00 217 MKLPLPSGNTGLEPWRAGRR GQGTTFYFFLPDTPPLVEQQ 485 ae001863_128 1 in 2 196 5 7 -5.40 75 MARPSSPPGNELSTDPAQLE LEALQTLEEGGPTSLPARED 486 ae001863_58 1 in 2 743 0 2 -0.76 346 MSQQAELNRLEPPFSRQNRK AEQLRALATQLDQSLSRFRL 487 ae002013_7 1 in 2 220 9 5 -17.24 47 MTSRTDVPRQPNSSTQRRAY TGFADGLRVKIPAKPVRVTV 488 ae001826_71 1 in 1 327 9 3 -17.83 268 MIDAPRVNHHDLSAHMPGMS LEVFIQAFCPPGAAESEVVT 489 ae001864_8 1 in 1 291 9 4 -9.33 66 MGTGDPSPLASQGPLPLVEG EIEGQRSVLHTDILAQIMFL 490 ae001877_4 1 in 1 401 7 3 -8.00 187 MQTAGPITREALRTQFPSLA RASLAHYTSEEDVARLLAAL 491 ae001881_6 1 in 1 402 9 3 -12.00 153 MTTPTPTPTPTSQSLAAPFA TAERIRHLREIEQNWPQRRG 492 ae001907_7 1 in 1 328 8 3 -8.67 54 MTQRPDNTTPDNANPKRQRV LQDLGRAANANGQNGNGAGQ 493 ae001931_17 1 in 1 481 7 2 -7.04 62 MGKGPGPCALAFILWVGTWL FRSGKYAVLTTPGALAVVRE 494 ae001971_2 1 in 1 186 2 7 -2.53 37 MGFQDKGQSKVYEQGFTIIE NGTQVVGPQDFSLTVDVLRP 495 ae002007_7 1 in 1 63 9 9 -18.18 62 MAATAMKGLRFRPGELRRSE RAWLLVGLSVCLLALLGVTL 496 ae002008_14 1 in 1 402 9 3 -13.21 71 MAAVAWRFPPALTLSDTSAA MTAYLYRLSDSKLLGSFAVK 497 ae002008_6 1 in 1 337 6 3 -6.67 24 MIKILNLSAILRRMKVALLS ARDVPDLNKFVDLSVVKSLA 498 ae002024_8 1 in 1 255 5 5 -5.54 44 MGRSGPRAVLRITRVSAAAP ALTDTEQHGLVSPPLDLLAS 499 ae002057_2 1 in 1 402 9 4 -10.29 74 MCPPARSTPCRGVRWGEERG NLSGNLGLALRRSVQFFKDT 500 ae002061_14 1 in 1 98 8 9 -8.31 54 MTRFEDRVLYQGDPWVRLDT ALELLGEDPSPAPGEPPQGE 501 ae002063_10 1 in 1 210 5 5 -5.33 33 MRAAARVQPVQNVGPLALLG SNFGWDPDASETCRDGKRVP 502 ae001863_12 1 out 77 336 6 3 6.16 174 MLLVPAFSGGFAMRALVCQQ GSEALRALLGRQVTGKVVIT 503 ae002008_10 1 out 58 370 6 3 6.32 208 MTSPSSTATSSPTTTTAPTP AMLSGQSGKVILDWETEEQS 504 ae002060_5 1 out 34 431 4 2 4.48 227 MGERKCGGWPPKVFLHSLSP FEAFDKRQPGWIKVELEPQA 505 ae001862_119 1 out 31 392 6 3 6.12 210 MKAIVWQGVNKVGVETVPDP LYKTFRDKQDCCIKVVLNPW 506 ae001980_4 1 out 14 286 0 4 0.52 179 MGWPEGRAPVAPEQGAPGPF QGASPETPPSEAGTNPVKKE 507 ae001890_9 1 out 13 490 4 2 4.40 316 MRLSDLAAALQLPAPETDPQ RATETLPWNEVAEARAVLAE 508 ae002048_7 1 unk 11 344 0 3 0.00 21 MGFTIFVVVLVLLVIITLLA ARRPAGHRRRHASQAAGVSR 509 ae001897_10 1 out 10 73 9 9 11.68 43 MFGVAGGVGLAVVHAFEGRL GGSVSQRPAPKTREVSKPVH 510 ae001894_8 1 out 8 199 9 6 9.88 165 MKGKGMKGAQAVLTALLLAS TLSAEDERRIAALLREREEQ 511 ae002041_2 1 out 7 61 3 9 3.73 51 MNLIQYFRDAREELSRVTWP LIVWALDLLFGTAIKAALAW 512 ae001935_2 1 out 5 132 1 9 1.93 46 MVYCGPSRSFRRPCSRFRSH DPVTGAPVVNEPVVQVPGER 513 ae001904_9 1 out 4 140 0 9 0.28 39 MSVPRRRLRDDVEGVTFDFA AVKKAGGERLALGTRNADSD 514 ae001925_10 1 out 4 713 8 1 8.68 514 MSDVERVARPAKLWQHTCRL DAADILKPGETITVTYQVKV 515 ae001888_3 1 out 3 511 9 2 15.35 61 MQASNRSGAPSLMKLTPLHV EADQAMYRVKHSASDPGALP 516 ae001931_14 1 out 3 341 1 3 1.76 324 MFRRDPLMAQWRAVARLLEL LVGVRAGVPLLLLGLLGGTD 517 ae001862_41 1 out 2 399 7 3 7.49 346 MSETLYTGISQLATPRPGPQ EVAYTLGGNAVAEVYLAGAQ 518 ae001942_2 1 out 2 369 5 5 5.40 92 MTRMTPPAAPRAAAAPPERR PAAPGAFPLTTFTLVLPEVL 519 ae001955_9 1 out 2 112 2 9 2.00 97 MAGSARMSRVLSGYIHRATL LGGGGFLLWRTVPLPLLGQL 520 ae001962_12 1 out 2 234 9 6 21.25 218 MPQPERKTKDLQEWQELCRQ LWCLQVGSVLEARGKGAKAR 521 ae001826_85 1 out 1 319 4 4 4.00 212 MPLSVGKVEEGHSLAAACHK WVMVQQPDRLNREILDWLAT 522 ae001827_3 1 out 1 185 6 6 6.00 104 MRGELGQLLGAYILFYKGPH SARHHAKEVAVEKAIEEASE 523 ae001862_11 1 out 1 237 1 5 1.22 191 MSELILVRHGQATPFEKATD RLSLDSFNEEGHLTPELRSW 524 ae001862_173 1 unk 1 116 0 9 0.00 24 MNILLLIVVLALACILLLAL RWQREHPPVRVRQHGVRGLE 525 ae001862_78 1 out 1 350 3 3 3.50 34 MAQGRWWSGSRAWSAQWWWV EETTPPGEVGPEDSGFGVLQ 526 ae001904_3 1 out 1 281 0 4 0.00 212 MTSSSTPAPRATLLVIFAHP TAIREYPLRGLFDGVGVEGL 527 ae001912_5 1 out 1 201 7 7 7.47 38 MSTSRLRGDTNPYIAFSDLT KFAPQNERVEIVVEYAQKST 528 ae001938_9 1 out 1 179 4 7 4.89 27 MNFNVKTLLFILAPVVLLPL EGTVYLVTDPAHQRDFFLPA 529 ae001959_10 1 out 1 95 9 9 10.35 40 MFMTQYTNPDVIGDSPAWLS ERLVNRVKNARTEQVLSKYE 530 ae001971_6 1 out 1 802 0 1 0.16 69 MVTEAIVGSGGPQPNRQFVG STNSLSSIVPLTTSSRGISF 531 ae001971_7 1 out 1 293 4 4 4.12 35 MNCSETQMKSEGFTLVELLV DATGTYSITIYPTNLGKVAA 532 ae001972_2 1 out 1 160 6 7 6.00 81 MNEDLNRPAGRYFEELPVGT GELVAQCKRTMLFHKRPDID 533 ae002010_10 1 out 1 109 6 9 6.22 51 MTAPDEAPTTDQPAPSPAPR ATNSAGGASYECILSRPKLG 534 ae002011_8 1 out 1 188 2 6 2.00 109 MLSPTPPMTPDVSLKPVLDF RVDVHMEITREEWQSGAGAD 535 ae002032_2 1 out 1 261 9 4 12.67 243 MTEVTSVRPSSINSREVQSD GLLLHTRSFEGCAARPPPRV 536 ae002045_12 1 out 1 85 0 9 0.00 70 MHSDTVIQIVSILGAIQILV GTWSLVSLAALLWPGKMGGG 537 ae002065_12 1 out 1 332 4 3 4.89 64 MTAVTEALPVYFATLSFSEG AGPQVNVGRLLTELQQLEAS 538 ae002086_9 1 out 1 103 6 9 6.66 82 MPALALAFAGLLGPALLVLA GAGTLVLQRREAEHRQVLPL