--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Chlamydia trachomatis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 28 3329183 9 in 14 379 2 3 -2.60 31,71,97,132,166,211,303,338,368 MKKTKYLRQVNLWVFVVIIL ISTMASLGILQSIYSRRFAK 29 3329219 9 in 7 336 4 2 -4.48 27,94,137,175,206,230,258,280,332 MLPLTYVVKAFSIGLFFSLF RNFLIVELICVVVGIIAVFV 30 3328913 9 out 12 578 7 0 7.25 41,94,117,320,398,436,458,511,563 MKEPQTSYQRFFRAYNRRAL LMAIAVIGDGIRDALDPKMQ 31 3328402 9 out 5 446 9 2 14.46 37,72,113,145,206,238,342,375,426 MSAEILARVQFALFIGFHYL SLLLKKIGEGPDEQDLIEVD 32 3328403 9 out 3 353 9 2 12.89 28,76,98,142,184,224,260,296,338 MEFSLATILPVVWYVILCIA VAYAVYIYRVFRGKTDFPSI 33 3328463 8 in 4 451 3 1 -3.89 35,58,87,120,160,211,252,291 MLSCIFQDTIFLSSFLAVSL DPDYDPHQREIPKRTRKSDG 34 3328691 8 in 4 503 6 0 -6.46 73,130,178,389,411,438,465,490 MLEKLVDSLWKICRKSKFQH GNVFAPLFDNIALKQYRQRR 35 3329296 8 in 4 263 8 2 -8.43 36,65,104,132,166,199,222,251 MNRIEIDLRGKRRVVTPNAI SWLYVLVVAPVFSFINKRSS 36 3328627 8 in 1 302 8 3 -8.12 40,65,120,160,188,238,260,298 MSKIVLIQQLIKCKYALFAA LSLGIAFFANMIGLFLLRGI 37 3328788 8 in 1 575 9 0 -12.45 77,99,233,257,370,392,491,515 MVSRVPGSSDPVDVNALSNL DIIVDLVAESFEVDGDSFVE 38 3328846 8 out 8 293 4 4 4.27 38,64,86,120,162,207,248,271 MPMISILCSLFPPLLFPSLL LKRSYNASTPSPVSPESKIN 39 3328884 8 out 5 305 3 3 3.13 46,86,118,151,178,223,250,300 MFDSDHNSIFQSDLCQRLVV LLSTPIVYAILLITQNRTFL 40 3328531 8 out 1 425 1 1 1.48 66,93,117,168,210,247,272,315 MLRPPSFLKKLLSSVRNNFI TEIKKNSHNLSLSEIAKKVN 41 3328759 8 out 1 509 0 1 0.30 66,92,276,320,357,408,437,493 MLRYLYTTAFLTSLHRLSAL IGALSSVGKAVNTAVDHSII 42 3329309 8 out 1 366 3 0 3.24 30,60,82,113,270,298,333,358 MVIWKRYLLSRFWISLSSLF VMFIPAGFMLLITLYAYRKL 43 3328605 7 in 16 313 6 0 -6.30 28,118,157,190,248,271,295 MLSYIKRRLLFNLLSLWVVV DLLQAWIDPQIRYSYGKERS 44 3328665 7 in 1 256 4 3 -4.91 21,51,87,131,178,222,248 MVGLGLLLVFVGISIFLVNG IAAPVTLHILFNSCQLALLS 45 3329039 7 in 1 692 0 1 -0.82 311,351,389,463,509,531,561 MIRQWYGFFLCLLFSYTSCF APLILPERLSQSALEEMVFS 46 3328663 7 out 8 272 9 3 20.28 36,80,118,149,204,229,265 MIHWDQSRTLLSFPRVGLHL WLSIPMIFLGVGIIWIASKK 47 3329288 7 out 1 238 5 5 5.33 43,66,100,125,165,187,228 MGLYDRDYAQDSRLPGTFSS CNVIMIFWYLLQIFASSDKR