--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Chlamydia trachomatis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 48 3328606 6 in 15 281 9 3 -11.39 37,102,142,164,215,263 MFRSSSSHTWRYIRTNKMLV VSFNCIGEGLRTKLLEENTL 49 3328914 6 in 12 492 9 2 -12.23 28,276,317,372,429,476 MLRYILKRLLLIPLTLFAII LIGDICYVLLDPRVQLEERK 50 3328600 6 in 4 470 1 0 -1.71 81,312,335,398,427,459 MDSKTSHLDDELCFKLEEAF DIMSMVIFLLITGTLNVLFF 51 3328629 6 in 4 298 9 2 -13.52 40,81,103,141,187,209 MAHTIRFTKFSFPLYFSKTL PSAFIAIENLHEVINEKRTS 52 3329310 6 in 1 354 4 3 -4.06 32,75,114,287,317,339 MPILWKVLIFRYLKTTVFCT PQLLSWLIFSWRIYTENQGH 53 3328528 6 out 28 214 1 0 1.22 37,77,102,143,165,203 MEHYLLTAKLLLRGCGYTLL LYLIMTSAFSYFARLSEKES 54 3328453 6 out 18 605 1 1 1.16 63,103,148,236,269,319 MQNILRTSSCRYMFLLGIRS ELPEEIPITLLGAVSDEVLL 55 3328486 6 out 18 708 1 0 1.73 55,94,139,227,267,321 MNKLLNFVSRTFGGDAALNM ISYQEVLPEIRIQPLGRIQI 56 3329325 6 out 7 204 8 2 8.56 27,71,93,126,156,189 MLHSLFRLTLLFYALFNALG AGNLMLKALSTAFNIGYYVT 57 3328694 6 out 1 244 0 5 0.56 41,64,109,138,170,210 MWLGDYSLLNLLGIFLQATF NIATDSPQPNTHSSSEEPKA 58 3328972 6 out 1 542 4 0 4.29 43,66,102,136,183,528 MFKLVSYIILSWVLVCLAQP VIGAIAYFYRKKKETPPQTF 59 3329005 6 out 1 289 0 1 0.66 46,70,112,172,194,268 MATLPEVLSGLGSSYIDYIF TLAWFKEIPTMLFGAHPPKV 60 3329089 6 out 1 559 3 1 3.22 66,107,194,243,322,411 MGIIARKRSFRALVVTHFLT AVQSGTLVQDSELKYSLHLA 61 3329327 6 out 1 589 8 0 8.68 79,112,134,187,235,274 MKKFISYLLIILPLIGLWEF SIDTFSIETLISDVSETIAS 62 3329184 5 in 33 659 1 1 -1.94 84,125,288,323,642 MSPQLFSSPFSRELLSYFFE ILHEGSTVIVGLNALRLLKN 63 3329003 5 in 19 306 2 3 -2.03 21,114,151,268,292 MRLIVRIFFFLCILSAPYSF LLVVMVDGWTLLLEGLMISF 64 3329011 5 in 5 391 7 1 -7.88 181,227,260,282,381 MARFLCTYLDQSEKKRRSFV GFIGLIMLSILLPLTSGIQT 65 3328839 5 in 3 607 4 0 -4.46 61,83,111,159,193 MFPQKITLWLYPLGLFANLF AINESASSMKECLSLIFETA 66 3329326 5 in 3 199 0 1 -0.28 44,66,126,158,189 MDWSFFLLSQSCILFLAADS GLAVVIVGAQLLVSGLQQTF 67 3328662 5 in 1 787 3 9 -3.70 563,587,656,709,759 MRMNKRTLLFVSLVSAAFLG VTNKILDEKHLQHEVIINKK 68 3329263 5 out 8 202 0 5 0.24 29,51,104,152,180 MRVSLPNFLTVFRLFITPIF EYIWVNKSHLLQKNDSPDGE 69 3328394 5 out 3 189 3 2 3.49 34,60,82,113,137 MPSTVAPIKGQDHFLNLVFP PDLNYPSLPTQSASPSQRFS 70 3328693 5 out 3 213 9 5 10.27 47,92,116,154,202 MTTNKSYLTYFTDALWINNQ FFLLGIMIWIVNIIRAPKTK 71 3328535 5 out 1 360 5 0 5.42 47,110,148,236,258 MVSFDLNDPVRNTDNHYRNI EGMDAQAYSFLSASPLDARI 72 3328601 5 out 1 363 0 1 0.71 74,103,201,263,331 MVSMSLNLPPAEVRLRPVTA ESKEYLASFLYGAVPGRLAG 73 3328667 5 out 1 414 5 0 5.45 29,76,111,133,155 MFSSAIVILTAIFVLCSGFV QILDAAPNCVKRVYIRKTHG 74 3328721 5 out 1 649 8 0 8.24 473,506,537,574,610 MRVDVDKYLFIGREKSEFFS DGGGKLLHPLKKVICQKSQN 75 3328782 5 out 1 196 6 9 6.32 41,81,112,152,182 MVAKSITKEYSETLISNPFV KIVKIALVVQGRSVRRLFIG 76 3328676 4 in 226 646 1 0 -1.05 142,230,328,350 MKLLLKAILRHKKHLVLFGF AFQRMWVLSGAKDWELNAVV 77 3328487 4 in 11 360 9 3 -12.62 49,102,161,201 MGEKTEKATPKRLRDARKKG YITSLNAQNLENKNINQFDN 78 3328836 4 in 9 167 9 0 -18.26 25,87,115,155 MPTRSLPTFLTLLLLASIDW SIGTLLLIGHLYFTKESKKY 79 3328467 4 in 4 619 4 1 -4.33 21,124,560,610 MTIIYFVLAALALGFLILIH ILLVLFFVFLTLQDLSRVFV 80 3328933 4 in 2 168 0 2 -0.44 45,80,102,151 MRQFCNLLSLSRVWLALLFC VILGALYFLERVLDYRRHCL 81 3328393 4 in 1 363 9 1 -14.10 63,85,125,147 MTPVTPVPPQSPQQVKGLLS SESSEEDSSSDSSQKKKPSR 82 3328540 4 in 1 228 9 4 -12.67 36,65,101,140 MLNETLFVLQILVVIGFGAF SPCVALAKVFYNRLNKEEAH 83 3328548 4 in 1 1449 9 0 -20.00 107,129,877,899 MANPSTPSFNHSDLSLQGRL MLKSQMEKLESQKRRLTDKK 84 3328553 4 in 1 503 9 1 -11.95 44,381,432,486 MKLELLLAFKYLIPKRKRLS SGAIPAQHVARMQVSDILKS 85 3328702 4 in 1 563 9 1 -15.52 60,82,272,294 MVYFRAHQPRHTPKTFPLEV HRLLNILSELQQLAQYLLDN 86 3328920 4 in 1 332 5 0 -5.43 50,80,102,191 MKSRNAQSILESLCKKTHRL LRKVDLKKSKKLIKFYGVVA 87 3329062 4 in 1 429 9 0 -14.72 56,81,339,425 MQYVMGRTNSMTRGFLNKRR QHILGVLYPAKASFFTNLSY 88 3329227 4 in 1 268 9 2 -10.46 47,173,195,258 MPPRSPSFLVHIWRLFFAKG SPQQAVICDLRCEDYLLLKR 89 3329318 4 in 1 234 9 3 -10.63 44,158,190,215 MRVIFPDKYKQTPFLGKALK TLAICFCYKENIPNPYRGSY 90 3329335 4 in 1 506 3 0 -3.13 265,347,369,408 MSSWFAQATDVALSQTLDLP QLTETLQLQREIDQTFTDAL 91 3328720 4 out 19 148 2 4 2.31 30,77,106,146 MSSERKYMIDVSVVGPVLAM ASIGIVESFALFAFVFALLL 92 3329185 4 out 3 248 2 2 2.70 73,95,204,243 MASEYEHFGNLSPEDHVKEV VWGVGMFITAISLCCSLIRL 93 3328668 4 out 1 404 9 0 15.52 30,76,113,151 METNSPFFWLGVNLLCIFVQ LLEVKEISLYGIKTVAIKDT 94 3329178 4 out 1 384 1 1 1.34 88,165,230,267 MDGTKIHETRSFSWLNNQQA ALATALQEGISHLQPLVTQS