--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Chlamydia trachomatis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 118 3329290 2 in 16 386 0 0 -0.39 277,330 MHLHEYQAKDLLTAYQLPIP IPCEFVTSMSEGAELAVQLS 119 3329004 2 in 12 94 7 9 -7.97 42,77 MLMLATSFKSILFEYSYEAL WLCSMILRFAAQIFQNFYKW 120 3328632 2 in 4 270 8 4 -8.87 62,84 MVSLALGTSNGVEANNGIND DPKSDSSDGDDDDGFNYGSR 121 3328873 2 in 4 150 6 9 -6.42 62,85 MSTVPVVQGAGSSNSAQDIS NAIGGVVESLSRRNSLVDQT 122 3328930 2 in 4 343 4 3 -4.22 38,180 MLKAINRFIRVCMKNFFRFL TGKLQVTALPDQQQKSLWYM 123 3328534 2 in 3 137 5 6 -5.40 55,94 MACCACVYGYDEICCREETA SPWMLLDSLRLNRSELKIVM 124 3328567 2 in 3 86 1 9 -1.15 50,73 MTISSTTTPSKSSSCFQFRE SGCMSCGVVLVGSKIEGICF 125 3328498 2 in 2 153 9 9 -19.94 33,56 MISMIPRFSIACIPLAVWLF TSLAHWKSLKELKSKYSVYY 126 3328513 2 in 2 141 9 9 -17.97 55,89 MTKVYANSIQQERVVDRIAL QKISTASANAKSNDKTRKLG 127 3328602 2 in 2 106 5 9 -5.22 45,82 MATTVNPNYSLPFCEKMVSS KRPLFSVTQSKASTLLHISC 128 3328634 2 in 2 122 9 7 -16.84 36,63 MANNSFIHRSKTYQLFVVVL GLLEERVNMLDGFYAKFHGW 129 3328781 2 in 2 178 8 5 -8.34 67,96 MATPITVPPSSASSQSSPDV DRSYIDHLVMQAEARSLEEH 130 3329281 2 in 2 264 9 6 -11.94 64,89 MTTLPNNCTSNSNSINTFTK YEAMEFEKEKHGIKPGRRGS 131 3328389 2 in 1 90 9 9 -14.39 29,64 MLCKVCRGLSSLIVVLGAIN KRHGDCCSSKGGYHHHHMDR 132 3328410 2 in 1 628 9 1 -15.43 102,618 MTSSYMSRLYSLNKSRRILH LGAFLYCIGLWYYRKNHRLF 133 3328451 2 in 1 367 1 2 -1.37 58,320 MFTSLSAIQNAIRPSCQLPV KKHASKDLVIVLTNIPQPVN 134 3328476 2 in 1 98 9 9 -14.13 64,93 MGSLGVYIGLKDRPVIKISK NFIIHCFSLKLLLPIHWFFV 135 3328514 2 in 1 132 9 9 -10.44 57,80 MECVKQLCRNHLCLDSLTGP PTVQFFKGKNGSADKVILVT 136 3328515 2 in 1 104 4 7 -4.21 47,91 MGDVMIQSVKTESGLVEGHR AACVLFIAAKDRGWIASTNK 137 3328518 2 in 1 273 9 5 -9.17 60,83 MTTPTLIVTPPSPPAPSYSA SQIRETLSSPRKSASPSTKS 138 3328556 2 in 1 383 9 0 -14.00 219,242 MLPHQQNSSSERARHHESRS QDTDSDDEQPSTSQQDIRMR 139 3328598 2 in 1 257 9 2 -9.87 69,98 MFFSGSVETLPPSTCLISKK CKVLPKKSKSESINNLVSND 140 3328622 2 in 1 547 9 3 -12.31 62,90 MRTDSLFNPPDSTRGVFQFL EFCQRVSDLSLIKRALPALF 141 3328625 2 in 1 234 8 5 -8.67 69,160 MRKALYTHAMLQKHTRIAVA RETGLSKANRVEQYDSLLTE 142 3328631 2 in 1 129 9 9 -14.19 60,91 MRCCCVRTNYEEVRSSSTGD EDQVELLRQENQELKALVYS 143 3328636 2 in 1 133 9 9 -9.77 57,85 MSYLFCSSCAPTLESPAELC SKSDFSLEFELNEADVTISV 144 3328641 2 in 1 115 3 9 -3.08 52,88 MVHSVYNSLAPEGFSQVSIQ LLARPQVFTLSTQFSPTKPQ 145 3328642 2 in 1 178 9 6 -11.40 124,146 MTYSISDIAHKSDISNPTSP IACIFLAKCDKGSDPQTLYV 146 3328744 2 in 1 563 9 1 -19.78 462,552 MGGDSSPSSDLIDLSLDSAA VMLLYFLYTAFRLVRNARRR 147 3328765 2 in 1 121 9 9 -12.84 57,80 MQLPSIIQSFFFPKAPPSPL SSPLPTLMRYFKSIGLGKAA 148 3328808 2 in 1 243 9 6 -13.00 128,152 MFGSIPCYPGYNNIPAYSNS KKTACKLSARIQKILKNQRG 149 3328817 2 in 1 335 4 0 -4.29 28,108 MLLRKFCGYLFCSSLVCSFI AHQFISFHSADNTGLVTLQI 150 3328851 2 in 1 233 2 5 -2.99 47,95 MRLGFQESGNSPAKGACVMK ISCGVLNSDPCATSPFIHPQ 151 3328919 2 in 1 121 2 9 -2.69 61,99 MDFMSVVPQSPCSSPTNFYR FLLPVQQETPHSSLRYLATT 152 3329031 2 in 1 650 5 2 -5.57 39,332 MTIPIHENKYSMISFTRTIG CPQHDDITLLVLKIPKEPSA 153 3329175 2 in 1 334 7 3 -7.07 34,266 MPVLPRFLKNKIAYTKSLGY AEELLNKLPEEMKSAVLKLR 154 3329254 2 in 1 83 9 9 -11.18 31,77 MNSNIEYRQYRIDILSCFIC LTFFFGIASGIFLVVLHPKQ 155 3328581 2 out 7 282 9 0 21.65 43,73 MSFLTHKKSERKEKVFFNKE DEIERVITQLRHLQAIEEEV 156 3328635 2 out 4 176 3 8 3.17 75,99 MLAFFLRNRGAMFNISFCCN AQKKIEQLQSGLKCVLEESL 157 3328780 2 out 4 110 0 9 0.83 59,89 MPVVQKPSVLEYAPVSPSTT TKHALLSENSGTELITIKKQ 158 3329009 2 out 4 151 3 3 3.24 38,75 MNSEGKGTEMAFKRKRCFLL VDLFPGQKRGAAAQRCLCLE 159 3328715 2 out 3 115 5 9 5.77 50,94 MCYVLNFITGKYSTPSPNNC LYQLLRQLPAHCCGSSHQIE 160 3328660 2 out 2 116 3 9 3.82 75,97 MGIKPHDHGCWGSRGNIFTL AFKLYDLFKHDVPTCSITSK 161 3328400 2 out 1 418 4 1 4.12 34,267 MINFVSWISRNWLQKLVSLG RTSGNKVIIQVTSSSLKKKS 162 3328565 2 out 1 79 3 9 3.32 40,75 MIVTFDKYLAPELGPDPLER KRILCVVCNILAAPITCLLA 163 3328633 2 out 1 147 2 8 2.33 52,75 MSFVGDSVPLRSYMPEAPLV LAKQQIEEEKEAILHSIFPN 164 3328637 2 out 1 196 4 0 4.17 62,84 MSTTISGDASSLPLPTASCV LDSAEKEKAALKASIDANQA 165 3328690 2 out 1 219 2 3 2.10 46,99 MSERKVENVTRSKRNKLLKF EEIFSQVPDNAIFMSLFPLA 166 3328692 2 out 1 316 4 0 4.59 32,194 MASKSRHYLNQPWYIILFIF PYRALLTFFANSKPSGESHD 167 3329037 2 out 1 189 6 7 6.94 144,182 MEEHLRYGRNLAYTLQRMTA YVGMCVVMAMGISVIWNMYL 168 3522902 2 out 1 63 9 7 25.00 37,59 MFTLFLCEHLLTNILASSFL EITCLALPLGIHSIIGFSYL