--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Chlamydia trachomatis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 15 3328656 1 in 15 328 5 2 -5.96 87 MPNFVTLEIREAIRQAIDEE LEMATLPNINRILDAIEKIM 16 3328793 1 in 12 373 5 2 -5.08 116 MIELVTDSPHPIHLVDSLQN TISKHILTKVLEEEFYAMHN 17 3329170 1 in 9 334 0 2 -0.04 200 MKETIAYLGMGMWGFSLANL NLDIQEGIAQLLQRDTKEEY 18 3328478 1 in 2 160 9 6 -22.00 140 MRIIPFDPYGSMAFQAIAKD IARNEGILEMTLSLFQHKDN 19 3328500 1 in 2 298 0 3 -0.82 62 MSLQKLLVTDIDGTITHQSH DFGILSAWEAGELRYKQLVN 20 3328719 1 in 1 171 8 4 -8.81 45 MVNHLLRLGLLSLLRYLLSF LSRSHHLWMEVISLKAFSQL 21 3328771 1 in 1 566 3 1 -4.00 444 MGLSRLAFISFLSFTLSASC MKKTHYKNIPILSGLLMRIV 22 3329008 1 in 1 174 9 4 -28.15 31 MFRKIKKKRAFLLSELLIAC LVRKVGALPPRTLSYIFAVG 23 3329086 1 in 1 255 9 3 -9.00 30 MNTLGPYHKRVRFITYLFVA GRGDPIWKPEASILSGTILV 24 3329118 1 in 1 149 3 7 -3.00 99 MADLDVFKEDFALLFEAGMV LAKSVLDWHDGLVAKSGGPL 25 3329177 1 in 1 260 3 3 -4.00 98 MMIPFYPFPLWGSFPARSLR LFRAHVYPLLEIKVDEQSLL 26 3329191 1 in 1 448 3 1 -4.00 103 MLINFTFRNCLLFLVTLSSV DIFSENVAVQIHLNGTVSIH 27 3329312 1 in 1 321 9 2 -13.65 52 MITRLFENDKQLEGFFSSLD LRLRNRTVLVKARGVIIESI 28 3328997 1 out 56 465 1 1 1.72 194 MNEAFDCVVIGAGPGGYVAA VWAESALLAVDTPLHMPPAK 29 3328861 1 out 23 192 9 5 10.00 100 MPEGEMMHKLQDVIDRKLLD SANEAMEFGLLDGILFSFND 30 3329161 1 out 23 203 9 5 10.64 106 MTLVPYVVEDTGRGERAMDI YGLIDKVISSAKETKDKSIA 31 3329291 1 out 18 291 6 3 7.00 96 MLELLSKDLPIITQGITGKA VTVVESLALIGEAVASVLKP 32 3329025 1 out 13 255 2 3 2.92 150 MKTIAVNSFKGGTAKTSTTL ARASEDYLKLTEELLFLLRN 33 3328681 1 out 10 483 5 2 5.36 311 MHLDQLLQNIPAKIYGKVES KHQTIVFDDREVVCEALAAL 34 3329241 1 out 9 377 1 2 1.56 91 MKEALSIDFITNDFLGFSRS TGSTSTMQRTLEDNFAAANA 35 3328465 1 out 7 379 9 2 10.76 112 MKHLALIGSTGSIGRQVLQV CLSLEEILSVDAEARARAQE 36 3328830 1 out 6 269 9 3 9.91 256 MEFIGKNNARVKSALALKRQ SSSVAAVAYEVVRQRSIRNL 37 3328621 1 out 4 242 8 3 8.53 227 MSKQPENSFSSDKFFPIKQK AEVWVGYADGSIVRKKEHNE 38 3328970 1 out 3 153 8 7 8.56 77 MNEKPVLGIQDIQNLLPHRY VGSQVVAEGELSFVLVKKES 39 3328395 1 out 1 316 2 2 2.00 142 MLKVLFHTMTLFGHLLSTPI DEKIYKFGSSLFFGASANLH 40 3328589 1 out 1 148 6 6 6.58 100 MNIAKQQQAFLGIDYGKKRI PSDSLAATLILSSFLDSRKL 41 3328815 1 out 1 408 9 2 16.00 251 MMKPLRFGYFFCAIYFTLLQ HEGQFVREECDYYGFRLSYG 42 3328895 1 out 1 329 9 2 16.00 25 MFVSVGITASLTTILAAPVL WKRIRFCSPPEICLMRCLYE 43 3329001 1 out 1 278 4 3 4.00 152 MTANTFGILNILMKQAKADD DSPHNEYFRERLEHCISILV 44 3329047 1 out 1 130 9 7 17.00 104 MKFTVAVFGEAEKGSFESAY LKSLLLFSDQDLYDFLTFKD 45 3329127 1 out 1 356 0 2 0.00 184 MLPNHILTAIATIKHSLRTE VIAQIRAKATKPQAERLIIR 46 3522901 1 unk 1 49 0 9 0.00 19 MGWGFFVWVAIVRGLFLWLV GYRGIYPQEERGGEEKYRFL