--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Chlamydia pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 aad18431 14 in 3 468 4 0 -4.67 33,58,84,109,150,172,210,252,274,299,355,380,421,456 MHSHSKPTKPLGTFTVGMLS SLNCLIPFGIYFTHKRLSKK 2 aad18439 13 in 13 494 2 0 -2.56 36,62,109,161,188,233,271,305,333,370,398,441,478 MNKKHASFSSRLGFIFSMIG ILWKFNKQLYLRFSRYNHEI 3 aad18360 13 out 7 470 3 0 3.61 27,56,102,134,156,203,234,296,339,377,408,439,463 MNKKKRFLSLLFLTAVLLGI IVNIVIWIGIGSLWWKALGL 4 aad18869 13 out 2 547 3 0 3.10 60,114,145,176,207,248,288,328,374,400,430,479,515 MSRKDNEVSLARSIFNILSG EYWRGQRGLLQRQHVMQDTQ 5 aad19168 12 in 7 485 6 1 -6.30 33,61,115,155,183,226,261,311,360,383,434,479 MTSRTKSSKNLGTIALAGMV TFIGLLALTAIFLFLTGRIK 6 aad18704 12 in 5 1402 5 0 -5.54 28,933,955,977,1030,1056,1109,1254,1279,1307,1363,1387 MKQKVKRNFAIIICVFALAL SSLYIAPPLLLFMVRKENRS 7 aad19152 12 out 1 420 5 0 5.61 26,48,80,123,155,192,236,261,309,335,381,412 MLKLQLCALFLFGYLAIVFE LASYFGGLFSYFVLESLNFF 8 aad19105 11 in 6 396 7 2 -7.37 28,50,102,143,169,200,238,291,337,359,391 MSNKVLGGSLLIAGSAIGAG FALFLMFLLIVINVVSIYHE 9 aad19107 11 in 6 396 7 2 -7.37 28,50,102,143,169,200,238,291,337,359,391 MSNKVLGGSLLIAGSAIGAG FALFLMFLLIVINVVSIYHE 10 aad18819 11 in 5 426 5 2 -5.57 19,56,101,128,157,195,227,283,328,376,419 MLPLIIFVLLCGFYTSWNIG TLPAGALLSILFFFALRALF 11 aad18495 11 in 2 515 4 0 -4.91 44,84,113,160,205,243,302,348,377,403,485 MTKTEEKPFGKLRSFLWPIH LAQSALKEQEVAQEDSAPAS 12 aad19092 11 in 1 450 0 3 -0.53 30,81,122,167,206,232,288,331,365,406,436 MILPPYSYSLKIGAAVLFFC ISLGVFWLLKNVPEFLYCFF 13 aad18804 11 out 7 455 1 1 1.01 50,88,128,182,204,279,320,351,380,412,442 MNVWTKFFQPPKHIKEIEDQ IALLLFLPTWNATEKNTRSK 14 aad19014 11 out 5 458 9 0 11.48 34,82,109,165,202,231,260,321,366,401,428 MLYFIEQLNKLSTSFCVFPM DVALLKERECSVADPVRNLD 15 aad18676 11 out 3 449 9 1 9.14 33,86,112,166,201,230,252,322,371,399,426 MNRLLSLLSVFDDFFWSYVA RKEVIFPARAASLTETSLST 16 aad18626 11 out 2 460 6 0 6.16 33,76,105,133,156,181,214,327,377,419,447 MLKGNIFHLGCGVLYFMNFS VAFSFVGFIEITWKNKVKTQ 17 aad18768 10 in 33 457 9 2 -12.69 35,90,137,179,210,250,303,343,403,431 MTTLRQFFLITELRQKLFYT AFLLMRRYDSVLKTDRTKGR 18 aad19041 10 in 16 385 9 0 -10.83 23,62,89,124,158,187,209,285,322,351 MKWFVISCLLGIFSLGLIMV GCRRFRRPHCPSSLGKGSFF 19 aad18438 10 in 6 395 4 0 -4.18 30,61,98,156,201,238,265,315,342,369 MKKQRSHYKKNNLLLLLSIL IDMIETSLNVWSDCCVVSLA 20 aad19151 10 in 2 565 1 0 -1.84 58,97,121,147,200,222,272,355,377,412 MKVPWAFKNFIPKLYTSIKE ALLFAQALTNLESKTSTRHL 21 aad18188 10 in 1 487 1 0 -1.23 70,93,258,287,316,340,378,413,435,470 MWNRCQVFSSFFFRYPISSW RTNVSPYASISATSYRFIET 22 aad18442 10 in 1 925 0 0 -0.26 39,75,104,132,190,251,297,331,382,408 MQRVLRLLFNLHHGEEKRAF NQEHEDFRTEESETLISFLS 23 aad18668 10 out 22 414 3 2 3.99 21,53,90,157,196,238,261,318,347,370 MKLWMKIFIGLFVGVTLGLV ASGEGELSPYESIKQESVET 24 aad19005 10 out 14 415 2 2 2.35 31,66,107,132,167,199,243,341,374,404 MHIGFCHCVRGGNFFYFVIN ISTMASLGVLQSIYSHRFAK 25 aad18753 10 out 2 540 2 1 2.83 45,82,114,168,242,310,355,383,409,493 MQSSEVKPFSRLRAYLCPIY PSSSIVREAQESVEQEEMAV 26 aad18974 10 out 1 386 9 2 9.31 46,86,124,149,194,248,298,327,360,382 MFFGAGNIVFPLALGYHYNA RYSPVLFYLTLSLTIVLKLV