--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Chlamydia pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 135 aad18961 2 in 16 95 9 9 -9.97 43,79 MLAFFATSFKSVLFEYSYQS WLSNMILRFAGQIFQNFYKW 136 aad18369 2 in 6 145 9 9 -10.35 46,78 MNPVTFDRIQVDFIPEDTSL GIIEEKLRIAEKFRYSDSVF 137 aad18254 2 in 4 264 1 5 -1.46 37,79 MPFDITYYTTPLLEIILIWV RSILSPKEHKRKPLFSWIWK 138 aad18319 2 in 4 111 3 9 -3.75 54,83 MSESINRSIHLEASTPFFIK SKIKELPKVDELSVVETDST 139 aad18515 2 in 4 119 9 9 -11.10 64,90 MPVSSAPLPTSHRPSSGNLG KTEGTTAEQQIKRKLSSKSI 140 aad18263 2 in 3 636 9 1 -15.17 98,616 MKQHYSLNKSRHILRSTYKL YVYYQKRRRLFPKKEEKNHK 141 aad18300 2 in 3 149 9 9 -9.27 63,92 MAVQSIKEAVTSAATSVGCV EAGRGGGSPLTQLDLNSGAG 142 aad18374 2 in 3 136 0 9 -0.16 65,115 MVNRYKSSAEFSADHYYDDN FTPCLLCYFMYSAAYSDFHP 143 aad18457 2 in 3 121 8 9 -8.10 47,76 MATVAQTPQTTQPQPSVSHK ISAPAAATVQKQKLEDRYSS 144 aad18202 2 in 2 160 5 8 -5.06 66,138 MLHQPYYDKILTGNTIYIPG STYESIKNYISKHICWKSNA 145 aad18220 2 in 2 367 4 3 -4.39 55,81 MAVEGRVNSSQALNQDCQEV FLEQQEDREYPSRAAQDQFW 146 aad18283 2 in 2 165 9 9 -14.32 44,73 MVKCSSIIHENKKPAQLLPE IFLKDPDFLIKSALANWKIL 147 aad18326 2 in 2 91 9 9 -11.00 52,75 MDFSVFPDRFVESTSPSPIE LIVLVLLIIECRNRECCRRI 148 aad18327 2 in 2 156 6 9 -6.88 74,113 MIMTTISNSPSPALNPELSL IEALRGAPRAESPTESPSTW 149 aad18516 2 in 2 105 0 9 -0.36 63,88 MSSPVVTGTSSASPVEQTKL AIMLISMYKITHPSQNTPIS 150 aad18576 2 in 2 101 4 9 -4.17 58,81 MDPASPVAPHVLQDHVQLSS CACWRYKISNALEKTKVAHE 151 aad18584 2 in 2 212 6 7 -6.07 69,95 MATSVAPSPVPESSPLSHAT QKSFMRSIKHLSKNPVILFD 152 aad18696 2 in 2 196 7 7 -7.41 99,121 MSSNLHPVGGTGTGAAAPES VLNDGRGTPVLSPLVSKIAR 153 aad18972 2 in 2 154 9 6 -11.77 123,145 MPFAKETEMQRTCWKCEGSV AYFYGIIGAAVAYRGYRKLP 154 aad19203 2 in 2 118 5 9 -5.12 31,81 MSLNKEIGMTVLFYAFLFIF LPAAEESDTQASSESVEADE 155 aad18159 2 in 1 93 2 9 -2.63 26,63 MLGKIIRGLSSLIVILCALN RHSHGDSCSSGGCHSHHSDK 156 aad18170 2 in 1 241 9 5 -13.56 59,81 MTAAPAILHVSPTPPEETKF KAVVHEFIVLTTMARELEFF 157 aad18179 2 in 1 288 9 5 -16.13 60,85 MSHLIPSLRNSVTSYFHKPQ SPPPVQRKAILPWFCKQPTD 158 aad18187 2 in 1 416 9 3 -10.62 80,102 MAEISTPSLPDSSIVSQKTP VSVNSISQVPLQTACRALFL 159 aad18196 2 in 1 642 7 2 -7.27 50,76 MQVPLSPQLPPPPPDHSVGA ASQCIQRVPKGFKFRNGSMY 160 aad18277 2 in 1 485 9 2 -17.24 25,47 MLGILLIASGIIFLAVAIPG QELLEKEELPLVAARMSLEN 161 aad18284 2 in 1 344 9 3 -9.38 64,86 MENAMSSSFVYNGPSWILKT KALLKNPQGISIKDLKQFLV 162 aad18299 2 in 1 161 9 8 -9.85 66,88 MSSSEVVFQTVHGLGFGGLS LEELQAEIQAVTQAIDQMSD 163 aad18317 2 in 1 167 9 1 -16.67 60,82 MTRSTIESSDSLCSRSFSQK HETDGIILKRYMKGAKMYFY 164 aad18322 2 in 1 264 9 5 -10.35 58,80 MKNVGSECSQPLVMELNTQP YRDGYLTPLRAGPRYIINRA 165 aad18339 2 in 1 390 9 4 -12.90 58,85 MSSPVNNTPSAPNIPIPAPT GGTPPVSQPSSPVDRATGDG 166 aad18365 2 in 1 393 9 4 -12.28 57,86 MVVSIYSEILSFSELTSCKH VHTKTLELEIAQLYVDILLE 167 aad18368 2 in 1 419 9 4 -12.07 51,82 MSSAIARDCFPSPSPQPSST ESESLDGNDSVFEDAHDDFL 168 aad18379 2 in 1 134 0 8 -0.13 73,121 MPYYANTLEFIQGTQSLCPL LATFIMAMPGLKRVATFLFY 169 aad18383 2 in 1 226 9 5 -9.52 63,90 MSSQPLVTTSSSLSRYVVLT EAKKEAKNASKTNPLWEGLG 170 aad18395 2 in 1 144 4 2 -4.97 57,108 MACSIFFRMSQGDYDDEPLS AIVFMQAPILQLAGMSGLIK 171 aad18426 2 in 1 169 9 9 -9.02 104,133 MIINVRAPAFGITSVQQFST EPIEVKTLISPDKPYPTVVY 172 aad18433 2 in 1 165 7 8 -7.50 60,82 MNIPAPQVPVIDEPVVNNTS LDEQGRPNESREEDSHTSKI 173 aad18434 2 in 1 515 9 3 -11.67 55,81 MFNLFFFTANKETTASHELI ITQAIASGKILDLLLQHLFD 174 aad18440 2 in 1 176 9 8 -13.89 121,165 MSAPIPTPQELSDQITCLNV CLCTFVANSLIKPVITVRTT 175 aad18441 2 in 1 203 6 8 -6.61 155,191 MTSPIPFQSSGDASFLAEQP IALIGTLGLILTNKNTPLPA 176 aad18499 2 in 1 433 9 3 -11.54 52,75 MSMTIVPHALFKNHCECHST YDVNFVTGARIHRKTSIFFK 177 aad18501 2 in 1 283 9 3 -9.43 51,74 MVNIQPVYRNTQVNYSQATQ LNADYEQFDSLLHLIFSHKL 178 aad18510 2 in 1 155 5 7 -5.34 74,108 MGYLPVSATDVLFESPAAPL QTPTLGTIFSGIVYAESQAQ 179 aad18511 2 in 1 245 9 5 -17.42 60,83 MTKTTSIPDVHENQSHLSVD KGLSVGECRSAPWINRDWTN 180 aad18514 2 in 1 371 5 2 -5.64 62,84 MSTTEPNLTNVNLTMLISSE NQNQPWVIILTTLARHPLIT 181 aad18548 2 in 1 339 8 3 -8.00 145,167 MSLLSGHRLEGFPPIAEVMA RSHPGRVERRDLEDEEEEVM 182 aad18575 2 in 1 111 3 9 -3.94 58,92 MTTLPKYVPRSRQNPDTLTF IASKIATACKKPPSISRIEI 183 aad18583 2 in 1 175 9 9 -10.45 67,94 MSSTLNGVFPSSLPEESADL QSTLYQKRFELSHKNEKTNQ 184 aad18621 2 in 1 536 9 2 -9.52 59,81 MATSVPVTSSTSVGEANSSN LFESFPVFNRMKEFLGESLG 185 aad18629 2 in 1 290 2 3 -2.39 218,268 MQIPRSIGTHDGSFHADEVT WTNRESCQRALRLTLQDRGI 186 aad18657 2 in 1 279 9 6 -15.38 61,90 MSSLLSCGRIEPTRVTCSLK SRPGEGYREGLLRMYGGKGA 187 aad18663 2 in 1 110 8 9 -8.46 54,76 MASSATPGFDGTAPSLFPPA VVPDHSKLQDMRSHSPIFSD 188 aad18664 2 in 1 359 3 2 -3.48 55,295 MSGPSRTESSQVSVLSYVPR SLLVILQDPFNTIESQSRSE 189 aad18694 2 in 1 96 9 9 -11.46 53,83 MYEGKSRMASPTPGQLHLQQ IALGILLINCVCDLKQYLTS 190 aad18705 2 in 1 366 9 1 -14.71 68,90 MKFPRISISDLIPTQMVIWW HSVTPISLSGFVGEQESYTF 191 aad18724 2 in 1 651 5 2 -5.13 72,99 MATPAQKSPTFQDPSFVREL QEENAQLRAEVERLEQEQFQ 192 aad18728 2 in 1 252 3 2 -3.18 144,217 MQICVTGVVLRSRPLGKNHT RNSSEDPYHEILRLSKVVHP 193 aad18732 2 in 1 362 0 2 -0.41 32,107 MAFKRKTRWLWQVLILSVGL NGLNHHRLFPGKVLKLPAKQ 194 aad18740 2 in 1 106 9 9 -12.00 59,94 MDEITPNYPLLRQDSLWNRV LLIIGIIVLLYGIYLFPQQR 195 aad18844 2 in 1 280 2 0 -2.00 117,139 MELKKTAESLYSAKTDNHTV NQKQKQDDKEQDSYKIEEAR 196 aad18908 2 in 1 264 9 1 -9.50 180,202 MEKLEFVTSLSSPDDDLITF YARKRKLENVRWKQIYQSYF 197 aad18931 2 in 1 635 7 2 -7.74 31,324 MIPFTKTIGFRLWLACAVAI FVGNSHQHDDITLLILKVLE 198 aad18971 2 in 1 158 4 9 -4.32 77,129 MADETPKENSSKESSSQFDS SCSTCSKDHCDKHQDTSNKP 199 aad18998 2 in 1 341 4 3 -4.00 33,270 MFFQNLAKKLTALGISPLGC AEALLNRLPEDLKHQVLKYK 200 aad19042 2 in 1 357 5 1 -5.00 115,279 MMKKIRKVALAVGGSGGHIV LAAYSQQRSTKTFHAFICEC 201 aad19068 2 in 1 158 7 8 -7.27 55,77 MSELAPCSTGLQMVPHTQVH PRFMLGSYLALRKDMDRQAL 202 aad19076 2 in 1 158 5 7 -5.08 19,50 MLPISILLFYVILGCLSAYI KDWQRVKDVPSLQQALKEAS 203 aad19106 2 in 1 106 9 9 -11.11 48,71 MGLYDRDYIQDSRVQGTFAS VLAKGMEIDCPRNLAKSVTV 204 aad19114 2 in 1 344 0 4 -0.11 81,333 MMEVYSFSPSVRTSFQHRVM VIFLICPDSLALQIPFLRNQ 205 aad19119 2 in 1 411 1 2 -1.12 26,301 MNLPVSLACLLLSGCVFFLG FPHTCDIDTNLAVIESLEKQ 206 aad19164 2 in 1 527 9 3 -11.67 56,86 MPGSVSSPPLSPVIVRERVP RPDLDVDSMWVWHPPVPKGP 207 aad19188 2 in 1 103 9 9 -16.96 68,90 MTPKSIQQLHLIKTIDPVRK LHFITLPWICKEDPRIIRKN 208 aad19191 2 in 1 811 8 2 -8.93 52,79 MQVLLSPQLPPPPQHSVGSI PEEKPSLLDKARSLFTREDH 209 aad19208 2 in 1 480 2 1 -2.44 337,373 MVCPNNSWFRMCGNFNCEWV RILECSGHLQTLFLGIKINK 210 aad19110 2 out 16 386 1 0 1.36 276,331 MHLHEYQAKDLLASYDVPIP IPCQFVSSMEEGARRAVELS 211 aad18378 2 out 4 223 4 6 4.56 53,75 MTKNAINSQTTTPQPNLTDA QQMAADQEALRKRKEEVAKR 212 aad18905 2 out 3 98 7 9 7.74 25,88 MLSYLLRTAINVYSFLILAY LRVLRFIILNIFHSPWLLQY 213 aad18303 2 out 2 1537 3 1 4.00 108,868 MASSSNNSTKQDGIPSWVNP IDSSVDKQKELLGLLGREEA 214 aad18310 2 out 2 142 5 1 5.39 82,130 MNIYQFSPGASPNWQASLMA TVSPLFYSLPKKYQLMKVET 215 aad18364 2 out 2 98 1 9 1.09 56,87 MSYPDISNVQASSIQSALLH LGLLLLAGGVGLLVEEAKSL 216 aad18572 2 out 2 320 5 0 5.67 35,198 MSKGSSKHTVRINQTWYIVS ACYRQLLINFSNLTHEKKTG 217 aad18752 2 out 2 333 3 2 3.05 39,163 MKTLWHFVSKAFLSIVGLCC IKHDILPLSHDAAYIPPYLA 218 aad18194 2 out 1 449 9 0 12.00 19,43 MLLLISGALFLTLGIPGLTA EKAHESIDKHYQSCVREQEL 219 aad18198 2 out 1 574 9 0 20.00 21,44 MLLLISGALFLTLGVPGLAA KLAKVEPYCQESVDYKSGFR 220 aad18215 2 out 1 461 9 0 11.18 35,442 MMSSKRTSKIAVLSILLTFT IIANATESQTTSDPTPPTPT 221 aad18261 2 out 1 185 1 9 1.94 72,120 MSIFNEEVFIISHRHTPLGQ GFKDPFLDDLLQEDKKKAPH 222 aad18356 2 out 1 265 1 0 1.52 78,161 MNTYTFSPTLQKSFSLFLLE HFHQHGRYGPIRSSGPIMKE 223 aad18367 2 out 1 404 9 4 12.00 21,49 MVVVALFILGIFFLSGSLAF VIKSLELELIHKIKDIVTEE 224 aad18371 2 out 1 159 5 5 5.13 79,123 MSKKVFFESYEDFANVASSW QNLSFTERMLEGIGEAVNFL 225 aad18559 2 out 1 426 0 1 0.00 21,148 MTLIFVIIIVWCNAFLIKLC VMLIFEKKVTSEKGRFFTKM 226 aad18600 2 out 1 695 9 0 11.52 23,64 MFVSNFIFFVVMPIPYISSW DPTRPVPNPDSNPDSSQNEG 227 aad18826 2 out 1 217 9 1 14.19 31,63 MQKLVHNIWKKFYSFSSAIA QFERMYSDGEWTLSKRFGKK 228 aad18893 2 out 1 401 5 1 5.49 38,60 MLLVRKWLHTCFKYWIYFLP GPLCYHVLGVLYPLHKEVLQ 229 aad18904 2 out 1 463 3 1 3.00 188,318 MNFKLPVYHIGLTKAENNTI QHVSESLEDQRSFKLQFTLS 230 aad19065 2 out 1 380 9 2 33.78 73,95 MIPSPTPINFRDDTILETDP RLAAVISNYLDSENRKSQQP 231 aad19067 2 out 1 369 1 0 1.86 72,188 MAPIHGSNAFVEDILHSHPS IDPIDSKTRVALATPILKKL 232 aad19113 2 out 1 368 2 0 2.48 79,202 MMLVYCFDPSVPTSPEHRLM VLFYTIFSPPKLPPAASSVY 233 aad19115 2 out 1 343 3 1 3.55 78,336 MEVYSFHPAVRTSFQHRVMA VGAGLIIYTEAIQLQIPFSR 234 aad19209 2 out 1 289 7 2 7.52 150,247 MLKIQKKRMCVSVVITVGAI GLQVISDEVAQLTLNALPKM