--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Chlamydia pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 17 aad19173 1 in 12 384 3 2 -3.76 123 MLQTMMSETIITTPHVVKLI SPNMEILYDILWSECHVMRH 18 aad18563 1 in 5 653 9 1 -11.62 27 MSYRKRSTLIVLGVFALYAL AAALKRLYEEWNRSPKQGGT 19 aad18479 1 in 2 158 9 5 -27.47 139 MRIIRFDPYGALSAQSIAKD ARNKGVLETASTLFYQKDEE 20 aad18678 1 in 2 100 9 9 -16.54 38 MFRNNHKPKKTKCKRFRWLR LAKNISHELQDFKKGILDDK 21 aad18936 1 in 2 337 9 2 -10.40 30 MKKTCCQNYRSIGVVFSVVL TIVGKFETELGECHAFIYLD 22 aad18340 1 in 1 266 9 3 -14.00 131 MHSKFLSRRKKNSSHKEETS AENLCRKEFPLFLMISCIKI 23 aad18579 1 in 1 476 9 2 -25.50 26 MMSRLRFRLAALGIFFILLV SWYFHSVHHTLGHLQLTYMP 24 aad19000 1 in 1 384 9 2 -16.00 88 MEKPQNRKAPRIFWLNNQVA KLARAMHDAIKHLTPLLGSS 25 aad19040 1 in 1 233 2 3 -2.57 25 MNRRDMVITAVVVNAILLVA MNDLDEYKARRLKPGDQLRI 26 aad19077 1 in 1 156 1 5 -1.24 47 MEKQNLKLDVKEIEFPETVF EEVSVQDLPSPEDFLLENSE 27 aad19205 1 in 1 298 9 3 -16.00 155 MPPPFVVTLTTSAQNNLRDQ ELLAKISKTHFKTFDEICSG 28 aad19207 1 in 1 456 8 2 -8.00 355 MTFPCGNCNCYYRETPPPNP PCQCLRCWRKLPTEKRPNRW 29 aad18970 1 out 58 461 2 1 2.64 191 MTQEFDCVVIGAGPSGYVAA EVWAEGALLATNHPLHFPPK 30 aad18985 1 out 23 203 9 4 10.64 106 MTLVPYVVEDTGRGERAMDI YGLIDKVVTSAKETNKDTSS 31 aad18660 1 out 22 191 9 5 10.16 99 MADGEVHKLRDIIEKELLEA TANEAKDFGLLDGILFSFND 32 aad19111 1 out 18 293 7 4 7.04 96 MFHSLSKNTPIITQGITGKA VVESPAHIGKTVDAVLRAKE 33 aad18789 1 out 10 279 0 2 0.64 164 MASIHPTAIIEPGAKIGKDV SIDKQALEEESADKEGVLIE 34 aad19184 1 out 9 264 3 4 3.44 120 MGSSMHVGVIGCSGRTGKVI GDTLELVLRNEHCLLKKTTD 35 aad18447 1 out 8 335 7 3 7.44 132 MWFSVNKNKKAAIWATGSYL YLLLVAFGGGLSWGAVVLKQ 36 aad18993 1 out 8 334 0 2 0.80 201 MKQHIGYLGMGIWGFCLASL NLDLKEGIALLLQRNTKEEF 37 aad18489 1 out 7 379 9 2 10.64 111 MKHLAVLGSTGSIGRQTLEI CHSLEDILEVDGEARALAQE 38 aad18790 1 out 5 153 7 5 7.83 77 MNQPSVIKLRELLDLLPHRY VDSQLVTEAELSFALVDKES 39 aad18578 1 out 4 729 9 1 9.11 65 MRIYQQDLFCRLCRDPAWFF QLDEELLGSYMERFIEQGVV 40 aad19083 1 out 4 197 9 4 10.00 112 MRIALSLLSLLMIFPIFGEE SEQTTEVESTSELQSEDPAI 41 aad18362 1 out 3 79 8 9 8.68 63 METYSFSTELQKNTSLYIME ILKVLSFPRSLLRTTSLWYR 42 aad18413 1 out 3 192 9 5 17.68 103 MKRYVVGISGASGVILAVKL GKILAYLNIPSDLTKQWSNP 43 aad18526 1 out 3 238 9 3 12.00 139 MTLYLLPNTLGTRAVETLPS LGSVKQSITKVPTIFLFHIP 44 aad18567 1 out 3 142 4 5 4.75 113 MLDNEWKAILGWGDDELEEL DAEALLMSYSKATKKNAALV 45 aad18669 1 out 3 365 1 2 1.60 43 MKKRFPSTLFLFYRRVTIAI NQDDTLSLLNMIEQIHKNRG 46 aad18999 1 out 3 266 0 3 0.68 96 MTLPLEPMIFWSSLSAKVMK AYIYPELQVKVDESSLNLSH 47 aad18183 1 out 1 213 8 3 8.00 80 MYFYKYVIIDTSGYYPFLAC FMFVEYDKQLSPDYRSYSCI 48 aad18385 1 out 1 297 4 2 4.00 101 MRRFLFLILSSLPLVAFSAD ASKIYMDTLLKSVLKELCSS 49 aad18405 1 out 1 268 0 4 0.00 260 MKTLGVKDQNLFIDQATLSV LMSLSTCVIWFPFPSNFVEV 50 aad18612 1 out 1 775 0 1 0.00 391 MASGIGGSSGLGKIPPKDNG GLVATTKILLQKGWPRGESN 51 aad18717 1 unk 1 320 0 2 0.00 20 MLISISLATLPILAFSWASF GLKRIRFCSPPEICYITCSY 52 aad18729 1 unk 1 199 0 3 0.00 21 MGFACRYLFFFIVLFASGSF GFSEVTLIFNVSSEGGTITF 53 aad18735 1 out 1 173 3 5 3.11 63 MADDTLIPKLMKNSLSQACS ERNYVLGPVIHEILLKFENS 54 aad18814 1 out 1 384 9 2 12.00 79 MILDFQFSIGYYLRVLELAI EYYNPHPSFWRQFLRLWQRR 55 aad18920 1 out 1 431 8 2 8.00 151 MLRQLCFQVFFFCFASLVYA VGEKRFPSWGAFPQQPIKRT 56 aad18921 1 out 1 262 9 3 11.50 26 MMKYLPYIAITACIHGGILL LEKYKVSKNISFHIKLVSNE 57 aad19155 1 out 1 244 0 4 0.00 43 MSYFNYQKNSVVLRSLGLLA SCSVRFPWGKTIAYKNIRKG