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Transmembrane helices for chlpn (Chlamydia pneumoniae)-- Low Reliability Report

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN

17 aad19173 1 in 12 |ali|phd|phdHtm| 384 3 2 -3.76 123 MLQTMMSETIITTPHVVKLI

18 aad18563 1 in 5 |ali|phd|phdHtm| 653 9 1 -11.62 27 MSYRKRSTLIVLGVFALYAL

19 aad18479 1 in 2 |ali|phd|phdHtm| 158 9 5 -27.47 139 MRIIRFDPYGALSAQSIAKD

20 aad18678 1 in 2 |ali|phd|phdHtm| 100 9 9 -16.54 38 MFRNNHKPKKTKCKRFRWLR

21 aad18936 1 in 2 |ali|phd|phdHtm| 337 9 2 -10.40 30 MKKTCCQNYRSIGVVFSVVL

22 aad18340 1 in 1 |ali|phd|phdHtm| 266 9 3 -14.00 131 MHSKFLSRRKKNSSHKEETS

23 aad18579 1 in 1 |ali|phd|phdHtm| 476 9 2 -25.50 26 MMSRLRFRLAALGIFFILLV

24 aad19000 1 in 1 |ali|phd|phdHtm| 384 9 2 -16.00 88 MEKPQNRKAPRIFWLNNQVA

25 aad19040 1 in 1 |ali|phd|phdHtm| 233 2 3 -2.57 25 MNRRDMVITAVVVNAILLVA

26 aad19077 1 in 1 |ali|phd|phdHtm| 156 1 5 -1.24 47 MEKQNLKLDVKEIEFPETVF

27 aad19205 1 in 1 |ali|phd|phdHtm| 298 9 3 -16.00 155 MPPPFVVTLTTSAQNNLRDQ

28 aad19207 1 in 1 |ali|phd|phdHtm| 456 8 2 -8.00 355 MTFPCGNCNCYYRETPPPNP

29 aad18970 1 out 58 |ali|phd|phdHtm| 461 2 1 2.64 191 MTQEFDCVVIGAGPSGYVAA

30 aad18985 1 out 23 |ali|phd|phdHtm| 203 9 4 10.64 106 MTLVPYVVEDTGRGERAMDI

31 aad18660 1 out 22 |ali|phd|phdHtm| 191 9 5 10.16 99 MADGEVHKLRDIIEKELLEA

32 aad19111 1 out 18 |ali|phd|phdHtm| 293 7 4 7.04 96 MFHSLSKNTPIITQGITGKA

33 aad18789 1 out 10 |ali|phd|phdHtm| 279 0 2 0.64 164 MASIHPTAIIEPGAKIGKDV

34 aad19184 1 out 9 |ali|phd|phdHtm| 264 3 4 3.44 120 MGSSMHVGVIGCSGRTGKVI

35 aad18447 1 out 8 |ali|phd|phdHtm| 335 7 3 7.44 132 MWFSVNKNKKAAIWATGSYL

36 aad18993 1 out 8 |ali|phd|phdHtm| 334 0 2 0.80 201 MKQHIGYLGMGIWGFCLASL

37 aad18489 1 out 7 |ali|phd|phdHtm| 379 9 2 10.64 111 MKHLAVLGSTGSIGRQTLEI

38 aad18790 1 out 5 |ali|phd|phdHtm| 153 7 5 7.83 77 MNQPSVIKLRELLDLLPHRY

39 aad18578 1 out 4 |ali|phd|phdHtm| 729 9 1 9.11 65 MRIYQQDLFCRLCRDPAWFF

40 aad19083 1 out 4 |ali|phd|phdHtm| 197 9 4 10.00 112 MRIALSLLSLLMIFPIFGEE

41 aad18362 1 out 3 |ali|phd|phdHtm| 79 8 9 8.68 63 METYSFSTELQKNTSLYIME

42 aad18413 1 out 3 |ali|phd|phdHtm| 192 9 5 17.68 103 MKRYVVGISGASGVILAVKL

43 aad18526 1 out 3 |ali|phd|phdHtm| 238 9 3 12.00 139 MTLYLLPNTLGTRAVETLPS

44 aad18567 1 out 3 |ali|phd|phdHtm| 142 4 5 4.75 113 MLDNEWKAILGWGDDELEEL

45 aad18669 1 out 3 |ali|phd|phdHtm| 365 1 2 1.60 43 MKKRFPSTLFLFYRRVTIAI

46 aad18999 1 out 3 |ali|phd|phdHtm| 266 0 3 0.68 96 MTLPLEPMIFWSSLSAKVMK

47 aad18183 1 out 1 |ali|phd|phdHtm| 213 8 3 8.00 80 MYFYKYVIIDTSGYYPFLAC

48 aad18385 1 out 1 |ali|phd|phdHtm| 297 4 2 4.00 101 MRRFLFLILSSLPLVAFSAD

49 aad18405 1 out 1 |ali|phd|phdHtm| 268 0 4 0.00 260 MKTLGVKDQNLFIDQATLSV

50 aad18612 1 out 1 |ali|phd|phdHtm| 775 0 1 0.00 391 MASGIGGSSGLGKIPPKDNG

51 aad18717 1 unk 1 |ali|phd|phdHtm| 320 0 2 0.00 20 MLISISLATLPILAFSWASF

52 aad18729 1 unk 1 |ali|phd|phdHtm| 199 0 3 0.00 21 MGFACRYLFFFIVLFASGSF

53 aad18735 1 out 1 |ali|phd|phdHtm| 173 3 5 3.11 63 MADDTLIPKLMKNSLSQACS

54 aad18814 1 out 1 |ali|phd|phdHtm| 384 9 2 12.00 79 MILDFQFSIGYYLRVLELAI

55 aad18920 1 out 1 |ali|phd|phdHtm| 431 8 2 8.00 151 MLRQLCFQVFFFCFASLVYA

56 aad18921 1 out 1 |ali|phd|phdHtm| 262 9 3 11.50 26 MMKYLPYIAITACIHGGILL

57 aad19155 1 out 1 |ali|phd|phdHtm| 244 0 4 0.00 43 MSYFNYQKNSVVLRSLGLLA

num	id	nhtm	top	nali	ali\|phd\|phdHtm	len1	riTop	riMod	topD	htmCN	seqN
17	aad19173	1	in	12	\|ali\|phd\|phdHtm\|	384	3	2	-3.76	123	MLQTMMSETIITTPHVVKLI
18	aad18563	1	in	5	\|ali\|phd\|phdHtm\|	653	9	1	-11.62	27	MSYRKRSTLIVLGVFALYAL
19	aad18479	1	in	2	\|ali\|phd\|phdHtm\|	158	9	5	-27.47	139	MRIIRFDPYGALSAQSIAKD
20	aad18678	1	in	2	\|ali\|phd\|phdHtm\|	100	9	9	-16.54	38	MFRNNHKPKKTKCKRFRWLR
21	aad18936	1	in	2	\|ali\|phd\|phdHtm\|	337	9	2	-10.40	30	MKKTCCQNYRSIGVVFSVVL
22	aad18340	1	in	1	\|ali\|phd\|phdHtm\|	266	9	3	-14.00	131	MHSKFLSRRKKNSSHKEETS
23	aad18579	1	in	1	\|ali\|phd\|phdHtm\|	476	9	2	-25.50	26	MMSRLRFRLAALGIFFILLV
24	aad19000	1	in	1	\|ali\|phd\|phdHtm\|	384	9	2	-16.00	88	MEKPQNRKAPRIFWLNNQVA
25	aad19040	1	in	1	\|ali\|phd\|phdHtm\|	233	2	3	-2.57	25	MNRRDMVITAVVVNAILLVA
26	aad19077	1	in	1	\|ali\|phd\|phdHtm\|	156	1	5	-1.24	47	MEKQNLKLDVKEIEFPETVF
27	aad19205	1	in	1	\|ali\|phd\|phdHtm\|	298	9	3	-16.00	155	MPPPFVVTLTTSAQNNLRDQ
28	aad19207	1	in	1	\|ali\|phd\|phdHtm\|	456	8	2	-8.00	355	MTFPCGNCNCYYRETPPPNP
29	aad18970	1	out	58	\|ali\|phd\|phdHtm\|	461	2	1	2.64	191	MTQEFDCVVIGAGPSGYVAA
30	aad18985	1	out	23	\|ali\|phd\|phdHtm\|	203	9	4	10.64	106	MTLVPYVVEDTGRGERAMDI
31	aad18660	1	out	22	\|ali\|phd\|phdHtm\|	191	9	5	10.16	99	MADGEVHKLRDIIEKELLEA
32	aad19111	1	out	18	\|ali\|phd\|phdHtm\|	293	7	4	7.04	96	MFHSLSKNTPIITQGITGKA
33	aad18789	1	out	10	\|ali\|phd\|phdHtm\|	279	0	2	0.64	164	MASIHPTAIIEPGAKIGKDV
34	aad19184	1	out	9	\|ali\|phd\|phdHtm\|	264	3	4	3.44	120	MGSSMHVGVIGCSGRTGKVI
35	aad18447	1	out	8	\|ali\|phd\|phdHtm\|	335	7	3	7.44	132	MWFSVNKNKKAAIWATGSYL
36	aad18993	1	out	8	\|ali\|phd\|phdHtm\|	334	0	2	0.80	201	MKQHIGYLGMGIWGFCLASL
37	aad18489	1	out	7	\|ali\|phd\|phdHtm\|	379	9	2	10.64	111	MKHLAVLGSTGSIGRQTLEI
38	aad18790	1	out	5	\|ali\|phd\|phdHtm\|	153	7	5	7.83	77	MNQPSVIKLRELLDLLPHRY
39	aad18578	1	out	4	\|ali\|phd\|phdHtm\|	729	9	1	9.11	65	MRIYQQDLFCRLCRDPAWFF
40	aad19083	1	out	4	\|ali\|phd\|phdHtm\|	197	9	4	10.00	112	MRIALSLLSLLMIFPIFGEE
41	aad18362	1	out	3	\|ali\|phd\|phdHtm\|	79	8	9	8.68	63	METYSFSTELQKNTSLYIME
42	aad18413	1	out	3	\|ali\|phd\|phdHtm\|	192	9	5	17.68	103	MKRYVVGISGASGVILAVKL
43	aad18526	1	out	3	\|ali\|phd\|phdHtm\|	238	9	3	12.00	139	MTLYLLPNTLGTRAVETLPS
44	aad18567	1	out	3	\|ali\|phd\|phdHtm\|	142	4	5	4.75	113	MLDNEWKAILGWGDDELEEL
45	aad18669	1	out	3	\|ali\|phd\|phdHtm\|	365	1	2	1.60	43	MKKRFPSTLFLFYRRVTIAI
46	aad18999	1	out	3	\|ali\|phd\|phdHtm\|	266	0	3	0.68	96	MTLPLEPMIFWSSLSAKVMK
47	aad18183	1	out	1	\|ali\|phd\|phdHtm\|	213	8	3	8.00	80	MYFYKYVIIDTSGYYPFLAC
48	aad18385	1	out	1	\|ali\|phd\|phdHtm\|	297	4	2	4.00	101	MRRFLFLILSSLPLVAFSAD
49	aad18405	1	out	1	\|ali\|phd\|phdHtm\|	268	0	4	0.00	260	MKTLGVKDQNLFIDQATLSV
50	aad18612	1	out	1	\|ali\|phd\|phdHtm\|	775	0	1	0.00	391	MASGIGGSSGLGKIPPKDNG
51	aad18717	1	unk	1	\|ali\|phd\|phdHtm\|	320	0	2	0.00	20	MLISISLATLPILAFSWASF
52	aad18729	1	unk	1	\|ali\|phd\|phdHtm\|	199	0	3	0.00	21	MGFACRYLFFFIVLFASGSF
53	aad18735	1	out	1	\|ali\|phd\|phdHtm\|	173	3	5	3.11	63	MADDTLIPKLMKNSLSQACS
54	aad18814	1	out	1	\|ali\|phd\|phdHtm\|	384	9	2	12.00	79	MILDFQFSIGYYLRVLELAI
55	aad18920	1	out	1	\|ali\|phd\|phdHtm\|	431	8	2	8.00	151	MLRQLCFQVFFFCFASLVYA
56	aad18921	1	out	1	\|ali\|phd\|phdHtm\|	262	9	3	11.50	26	MMKYLPYIAITACIHGGILL
57	aad19155	1	out	1	\|ali\|phd\|phdHtm\|	244	0	4	0.00	43	MSYFNYQKNSVVLRSLGLLA

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