--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Chlamydia pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 235 aad18347 1 in 15 344 3 3 -3.20 99 MLTLGLESSCDETACAIVNE EIRICARYQWESVSPFSLAS 236 aad18623 1 in 11 1043 6 1 -6.20 61 MIKKRAIFERMFPIPPPHCP CLLPRNPRTEDQNSKPDSSN 237 aad18851 1 in 3 845 9 1 -12.00 565 MAVRLIVDEGPLSGVIFVLE IQPNAIFLEKEGLKYKIDYN 238 aad18956 1 in 3 123 9 9 -18.57 32 MKRQKRKQSITLIEMMVVIT LNDKGDDLVIFSKRVQSSNK 239 aad18246 1 in 2 169 9 8 -13.04 41 MQRLGLSNLFHCLLLFLRYY NQEIVSRRHHLWMEVISLDS 240 aad18957 1 in 2 148 9 9 -9.79 37 MSNIMGSRRKLKRSFLLIEV VELFPDQKQAVSVQRCLCVT 241 aad18966 1 in 2 185 1 9 -2.00 175 MPTLAKSFYINIRDSRFYSW ILRIIFSVLMLPVWFLFKCY 242 aad18203 1 in 1 105 7 9 -7.38 71 MRYAKHQTNWNDENVKANLG LRQSVSSDTVTNLLLLNNTL 243 aad18216 1 in 1 52 9 9 -9.68 49 MYANCKHNCLCLYDFSRHRS YSFTLGIFLGRCLSTSNIVL 244 aad18217 1 in 1 77 9 9 -13.92 65 MTKIQCSAQYYRSRPAERAQ ALLFLFVMLLPLAAGSYLLA 245 aad18228 1 in 1 83 9 9 -18.11 67 MKQQHNRKALSRKIGTVKKQ VDLVLRKSITCLDGITTFLF 246 aad18312 1 in 1 102 4 9 -4.17 42 MTPSGFSLATEEKVQVSTAE HPGFFALPTKYQSMYIQTSK 247 aad18314 1 in 1 275 4 5 -4.00 146 MITGVVLEKHEQRTMFSLTL AESSALSDLTQWLKRELTSG 248 aad18598 1 in 1 402 7 3 -7.38 50 MTHCLHGWFSVVRHHFVQAF REVSLNFANDTSVECGCAFY 249 aad18599 1 in 1 582 1 2 -1.38 51 MASCLSAWFSIVREHFYRAF QDESEIYVCNQLTAQQNFAC 250 aad18639 1 in 1 385 9 3 -12.00 300 MSSVNQSSGTPNPEEVTSPE GRNQPSRGDKQDSDSEEETE 251 aad18806 1 in 1 294 8 3 -8.00 269 MKKLILYFAAFVASLFCGVF ADNSVRVEYINAVTGKSFQD 252 aad18815 1 in 1 389 3 3 -4.00 158 MGTPISGNDGDRNTISDPLE LNYVICQFFCSERLTSIEPK 253 aad18922 1 in 1 135 2 9 -2.00 39 MKYRFTEEIEEEPLVNLTPL QNVKNAIEAAGFHELHVALQ 254 aad19035 1 in 1 295 8 4 -8.00 169 MQEKPRHVHRIIHISDVHFH LLDFDAPLEIANEATWDCQK 255 aad19100 1 in 1 486 2 4 -2.00 101 MHMSNPISLFSPAELIAKYN TYEPNKACIAYLLYVLKIIE 256 aad19122 1 out 24 346 2 4 2.68 204 MEADILDGKLKRVEVSKKGL KEKNFFETRVTEYQTAGNLS 257 aad19021 1 out 14 431 9 3 17.00 30 MTWLSGLYFICIASLIFCAI LKLLGDYGVERSSIILDDFG 258 aad18236 1 out 12 327 1 4 1.96 176 MSNQFDQLKKLSTIVCDSGD DTQILETAITEFIKQIAAEG 259 aad18943 1 out 10 255 2 4 2.32 149 MKTIAVNSFKGGTAKTSTTL ARASEDYFNLTKELLILLRD 260 aad18562 1 out 9 483 5 2 5.16 311 MDLKELLHGVQAKIYGKVRP KHQTVAFDDKQTVCEVLASY 261 aad18965 1 out 7 335 6 4 6.00 257 MVRRSISFCLFFLMTLLCCT TSDKDSSDKDAPEGSNEIEG 262 aad19022 1 out 2 117 9 9 27.27 50 MLSRIVTCFLFLLSSLPLFA GKVEVLKGAISEILKPNDNK 263 aad18168 1 out 1 297 9 6 14.00 40 MLLLISGALFLTLGIPGLSA AEKKLGMPRNVGRNLGKQSF 264 aad18181 1 out 1 261 9 7 10.00 100 MFLQFFHPIVFSDQSLSFLP TKDKKAGFGLLTFFPWKIYP 265 aad18279 1 out 1 759 9 2 16.00 42 MVFSYYCMGLFFFSGAISSC CKKLKVAQDRLSELESRLSR 266 aad18315 1 out 1 342 1 5 1.09 80 MKLYSISSDVDTPWIFQLMS FQGFQGIRIYWEDSYQPNKE 267 aad18373 1 out 1 181 9 7 16.00 113 MSKESIRSYSEISTPTPIFR LRNRVVEEGASENQTVREII 268 aad18376 1 out 1 126 8 9 8.29 119 MLIGRYSSDDQFTEATKNTP LFKIIFVILHCIFHLVIGFC 269 aad18377 1 out 1 80 5 9 5.69 59 MKPNSIIFLENTKHYPDIFR GAGRLYSVWYTSDEDWKKQV 270 aad18555 1 out 1 259 0 5 0.00 189 MILTAAFSPCPNDIFLFRSF SKTGKKALHMLWKANECCQY 271 aad18603 1 out 1 265 5 6 5.55 54 MACPSISSWFTVVRQHFVNA EVATVDFMITCYGKDQEVQD 272 aad18604 1 out 1 672 4 2 4.57 53 MACYISIWISTVKQHFIRAF AVCAACDSAQDAPSEENNTD 273 aad18677 1 out 1 119 9 9 11.83 31 MDNYLLGSLIFCCVLLSIGM DQGIKWCAALVLIWKVFRNK 274 aad18827 1 out 1 252 4 5 4.00 172 MLIVLAFRQVFFSHSRSQLD LKNWIKEKSKQLYLKKQLPK 275 aad18861 1 out 1 162 6 7 6.00 28 MTKFLYCGLFYSLGLLVLAF PDKEDSSSGGMKTLYLSLFR 276 aad18964 1 out 1 277 9 5 10.00 153 MTANTFGTLDILMKHSKEDD DHPYVDYFKSRLEQCMKVLV 277 aad18978 1 unk 1 441 0 3 0.00 21 MWLVILWALAASLAIALVAK LRKKLPLNDHHIVEVDALLA 278 aad19017 1 out 1 265 6 4 6.29 251 MQGFFPLASGSKGNSAYLGT ALAQGITSPIYFSRLEVACP 279 aad19051 1 out 1 62 9 9 24.80 59 MRRNCIYAFDLDGTLLKGNS CIYRFFRFKFFFGIFHPSII 280 aad19156 1 out 1 497 0 2 0.00 392 MTVSYQSISTPPPEGEFDIF MDNFLLNILQTEHDAARSLY 281 aad19192 1 out 1 276 9 7 14.00 36 MLFLISGALFLTLGISGLSA KTKILRDEEKILRICYLELR