Transmembrane helices for chlpn (Chlamydia pneumoniae)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

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Description of Chlamydia pneumoniae

taxonomy: Bacteria; Chlamydiales; Chlamydiaceae; Chlamydophila
Chlamydia are eubacterial pathogens of humans, many other mammals and birds and are considered to be the most ubiquitous pathogens in the animal kingdom. There are no known free-living chlamydiae, thus they are obligate pathogens. Natural chlamydial infections in humans are recognized as the leading cause of many important sexually transmitted diseases worldwide. C. pneumoniae, has been characterized as a common cause of acute respiratory infections and recently associated with atherosclerosis.
The total number of ORF of Chlamydia pneumoniae used in this study is 1052.

	Number of proteins			Percentage of proteins in entire genome			Cumulative percentage of proteins in entire genome
Nhtm	all	top=in	top=out	all	top=in	top=out	all	top=in	top=out
1	47	21	25	4.5	2.0	2.4	26.7	16.8	9.8
2	100	75	25	9.5	7.1	2.4	22.2	14.8	7.4
3	28	16	12	2.7	1.5	1.1	12.7	7.7	5.0
4	24	19	5	2.3	1.8	0.5	10.1	6.2	3.9
5	13	6	7	1.2	0.6	0.7	7.8	4.4	3.4
6	14	9	5	1.3	0.9	0.5	6.6	3.8	2.8
7	13	6	7	1.2	0.6	0.7	5.2	2.9	2.3
8	9	8	1	0.9	0.8	0.1	4.0	2.4	1.6
9	7	2	5	0.7	0.2	0.5	3.1	1.6	1.5
10	10	6	4	1.0	0.6	0.4	2.5	1.4	1.0
11	9	5	4	0.9	0.5	0.4	1.5	0.9	0.7
12	3	2	1	0.3	0.2	0.1	0.7	0.4	0.3
13	3	1	2	0.3	0.1	0.2	0.4	0.2	0.2
14	1	1	0	0.1	0.1	0.0	0.1	0.1	0.0

nHTM HTML ASCII

at least 10 HTMs HTML ASCII

7--9 HTMs HTML ASCII

4--6 HTMs HTML ASCII

3 HTMs HTML ASCII

2 HTMs HTML ASCII

1 HTM HTML ASCII

Last update: Nov 30, 1999 Contact CUBIC WWW administrator:
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