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Transmembrane helices for camje (Campylobacter jejuni)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1cj020417in2|ali|phd|phdHtm|66500-0.4035,57,94,121,180,208,231,281,332,366, 397,427,471,533,557,619,660 MMYKKQNLPELTLRGLILGS
2cj0938c15in9|ali|phd|phdHtm|117060-6.0629,67,107,129,160,200,258,292,333,355, 398,424,474,711,869 MQKKSFLKIYGLIPFLLIAF
3cj0917c15out7|ali|phd|phdHtm|713707.4737,62,139,193,220,247,283,311,352,398, 491,540,575,602,688 LKIFYFLRRNMTQLSTKILW
4cj055515out1|ali|phd|phdHtm|430909.3020,43,68,115,144,166,197,219,242,275, 306,343,372,394,429 MIMVFLIISSIIVAIILGYI
5cj1568c14out78|ali|phd|phdHtm|596000.9351,92,128,150,185,219,257,286,337,382, 418,462,499,595 MQNLALISLFSPFVAFLFAS
6cj1566c14out11|ali|phd|phdHtm|462606.2634,62,97,133,155,181,222,258,286,318, 342,389,422,462 MLNNFLNLELLNISLSYPFL
7cj080114out3|ali|phd|phdHtm|4839011.2924,48,70,104,144,170,199,259,289,330, 368,410,432,463 MKSLVFKNFIINALGILFSR
8cj1013c13in15|ali|phd|phdHtm|108100-0.4833,66,95,489,524,795,828,859,926,974, 1007,1036,1072 MKNIIKSIGDLRVSVVLFLL
9cj0076c13in5|ali|phd|phdHtm|56010-1.2137,62,93,154,180,218,244,270,318,393, 428,462,550 LEQILTWQQIYDPFSNIWLS
10cj128313in3|ali|phd|phdHtm|44720-2.0332,56,92,148,170,206,246,279,303,325, 366,389,425 LKQFGLDRRTFKILLAGYII
11cj1567c13out64|ali|phd|phdHtm|495010.1320,42,87,124,169,217,248,279,302,328, 376,410,461 MLNYLIFFPLISAFVVLLLN
12cj1502c13out5|ali|phd|phdHtm|495818.8533,72,100,155,188,217,263,303,348,396, 424,450,474 MIKERLMEVVQINTPIAVMF
13cj1187c13out3|ali|phd|phdHtm|428414.6418,43,72,120,169,205,255,277,302,347, 373,396,425 MLAFFIFLSTLVLLFWRPWN
14cj056013out2|ali|phd|phdHtm|442101.1637,69,116,152,186,215,237,261,287,338, 377,400,429 MSSIFSTLSPFRLFVKYAVP
15cj0366c12in12|ali|phd|phdHtm|104090-9.9728,364,386,408,462,492,555,888,910,938, 986,1021 MFSKFFIERPVFASVVAIII
16cj1588c12in7|ali|phd|phdHtm|43190-15.6940,73,114,136,177,205,264,297,335,357, 389,424 MRKSKFGTKEIKILGLSSLG
17cj0981c12in6|ali|phd|phdHtm|41590-14.9134,65,107,129,170,197,254,286,325,347, 370,396 MQKKYKNIIYASLGGILEFY
18cj103312in6|ali|phd|phdHtm|100591-9.7428,340,364,386,437,465,526,853,875,899, 950,985 MFKLAINRPITVLMFFLALM
19cj0250c12in5|ali|phd|phdHtm|43690-13.8340,71,113,135,175,204,260,294,327,352, 386,422 MSKTLNQKDIKVLGLSSLGG
20cj1490c12in5|ali|phd|phdHtm|48891-10.4337,80,118,154,183,238,267,301,336,379, 414,464 MHPGNVLNYDYTVARYFMFA
21cj0035c12in3|ali|phd|phdHtm|40092-15.2933,69,107,129,158,185,247,273,313,335, 367,389 MQKHTKIHGFAKFKLIVILA
22cj1257c12in3|ali|phd|phdHtm|39490-16.8531,65,108,130,158,182,230,259,297,320, 357,380 MENFNRTLLVCWFGVFTTSM
23cj137512in3|ali|phd|phdHtm|43151-5.8129,58,95,117,149,174,231,257,290,312, 350,372 MLNNVLPLSFIVGTRFFGLF
24cj124112in1|ali|phd|phdHtm|39992-11.2932,65,97,121,149,176,226,255,295,317, 356,379 MQNYKKALFALALSAFCMGV
25cj168712in1|ali|phd|phdHtm|43492-15.0060,109,132,161,209,231,271,309,343,365, 398,425 LEYNKIKKVKIMNDKTYKFH
26cj136912out7|ali|phd|phdHtm|439616.1239,73,114,151,179,203,261,313,349,371, 405,437 MSFFKLKENNTSFKTEVIAG
27cj008812out5|ali|phd|phdHtm|445313.7230,67,117,158,188,248,281,313,352,374, 396,441 MDIMIILQVIVLLGAIFIGI
28cj033911in10|ali|phd|phdHtm|45302-0.3652,85,128,189,217,279,314,346,372,410, 434 MTNQQIDGIADKNFNTPEGR
29cj048411in5|ali|phd|phdHtm|42292-13.7250,86,124,146,176,208,276,310,352,394, 422 LETCYNLLKGKVMKHANSIK
30cj1625c11in5|ali|phd|phdHtm|41690-13.7143,65,107,150,177,216,262,309,356,382, 414 MNTPKWTSHDTRWVLSLFGT
31cj000611in4|ali|phd|phdHtm|43532-3.3237,82,108,131,165,207,265,304,346,375, 434 MILTLLTNPIIISVVLMTLL
32cj048611in4|ali|phd|phdHtm|41841-4.2530,68,104,126,161,205,256,294,344,380, 405 MTDSKNIKIAIVLVTSLFFL
33cj0999c11in3|ali|phd|phdHtm|36571-7.4434,61,98,123,154,184,206,252,288,324, 357 MKTSFLAHSVAIVRSNFKGL
34cj020311in2|ali|phd|phdHtm|44822-2.5124,46,102,133,166,217,280,322,370,412, 447 MEIFLALLGFFSLGLIVWLL
35cj137311in2|ali|phd|phdHtm|82331-3.7735,262,295,322,370,398,452,682,711,769, 800 MFAKLLKFFISRPKSTFFGT
36cj061911in1|ali|phd|phdHtm|43861-6.4336,71,107,160,182,209,259,288,327,364, 407 MAKKQLSLTRLSFPIFWDLL
37cj0935c11out13|ali|phd|phdHtm|444111.7457,110,159,189,233,270,310,332,359,399, 440 LSSKFSKIGFILAVAGSAVG
38cj161911out10|ali|phd|phdHtm|419122.0038,69,113,175,202,252,286,318,346,384, 408 MQELTRTKKIRSIIAASSGN
39cj0903c11out7|ali|phd|phdHtm|4889110.9046,94,118,172,224,253,282,339,389,432, 454 MNLDIMLDFANKASDIIANK
40cj0025c11out6|ali|phd|phdHtm|461828.4431,58,109,147,204,252,288,312,369,394, 423 MDKQFFQDFLMLSQAHTIAT
41cj067111out5|ali|phd|phdHtm|474525.8440,75,126,166,202,267,315,347,388,417, 467 MDFLTSLSEAGQFAIQIIIV
42cj0611c11out3|ali|phd|phdHtm|471020.3634,69,109,146,175,212,256,338,381,427, 459 LPYYGQISLWIEGMTYFSLE
43cj0850c11out2|ali|phd|phdHtm|395929.0933,75,112,160,182,217,258,286,309,350, 373 MSPKKIIKSMTALFAGMAFL
44cj1040c11out2|ali|phd|phdHtm|387727.1629,66,111,155,177,225,258,297,319,350, 376 MASFKKIFWINVTIVIIVAF
45cj1654c11out2|ali|phd|phdHtm|389232.5634,79,117,159,188,217,239,280,310,350, 379 MNNIVHKLKTLVLNEAFGGV
46cj1655c11out2|ali|phd|phdHtm|382333.3531,76,113,155,186,215,237,274,307,345, 376 MQMIKKMVLSETFPGILLIF
47cj1684c11out2|ali|phd|phdHtm|391818.2129,56,120,142,167,199,255,294,323,352, 383 LHQSVIDTQALIDLKILIVI
48cj0174c11out1|ali|phd|phdHtm|538616.4631,120,159,208,262,312,351,392,421,475, 525 MYKTLKYYKLGAILLALFLA
49cj1185c10in125|ali|phd|phdHtm|41632-3.2163,111,145,172,211,273,317,341,375,405 MAQIRKANGLVDWLDQRLAV
50cj1688c10in34|ali|phd|phdHtm|42192-10.7528,78,124,159,189,224,279,318,376,398 MNRALTNKILITLAFLFAYR
51cj119210in21|ali|phd|phdHtm|45851-5.4140,74,111,183,225,259,283,341,373,412 LETLSQTLAERKPPLYKRII
52cj119410in5|ali|phd|phdHtm|50879-7.1637,59,87,128,151,194,364,411,462,500 MQKDNLIAFVIFIISTIAFV
53cj109710in4|ali|phd|phdHtm|40732-3.7832,63,102,160,198,236,267,315,346,375 MFSKIIQSYAKGNLIVQICI
54cj123110in4|ali|phd|phdHtm|54131-3.7236,71,107,129,167,198,242,284,309,372 MDNFLEIFLITVAIAIVLNV
55cj1126c10in2|ali|phd|phdHtm|71300-0.9031,117,186,226,253,280,350,389,425,581 MLKKEYLKNPYLVLFAMIVL
56cj150010in2|ali|phd|phdHtm|40293-13.3535,97,131,160,215,246,286,313,351,388 LNSFKQKYLINFWDNSRSMI
57cj0385c10in1|ali|phd|phdHtm|31092-21.8729,56,95,117,140,173,202,243,281,303 MLKVIKHNLGIYFMILACLD
58cj0461c10in1|ali|phd|phdHtm|39531-3.9436,65,107,129,181,233,273,320,355,384 MNYIELLKNNKNIRILASVQ
59cj0557c10in1|ali|phd|phdHtm|36150-5.8850,98,127,170,214,238,261,283,307,340 VNKIEILKQHFKEIAKLNSS
60cj0601c10out25|ali|phd|phdHtm|447424.1259,107,163,190,235,272,315,360,400,442 MQRQTWSSTLTYILTVAGAT
61cj0934c10out10|ali|phd|phdHtm|446737.1658,113,161,189,233,270,319,362,401,442 MRTYFSKIGFVLTVAGGAVG
62cj086010out4|ali|phd|phdHtm|2909014.0520,53,83,111,136,168,198,226,248,280 MGVFLVLLGGIFWAISGVLA
63cj093710out3|ali|phd|phdHtm|337313.6053,82,113,146,181,214,243,274,304,333 LVFLKNLKNIKIFFKYKEYN
64cj0832c10out2|ali|phd|phdHtm|577212.1455,124,166,213,255,323,376,411,455,562 MNKFLVSLFLPLVAFANSSE
65cj043010out1|ali|phd|phdHtm|408727.6527,64,90,128,167,189,228,257,284,319 MEKIKNYKLIIILLSLDLLA

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