--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Campylobacter jejuni --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 210 cj0844c 3 in 88 93 2 6 -2.96 27,61,83 MVIDSFIISIFQVLQIVINI IIVLALQFLGIFLGNILRSI 211 cj0260c 3 in 13 84 9 7 -16.81 19,41,70 LITISLIISKEFLMVKNLII ALFLSFFCNLSCYRYQRCSC 212 cj0257 3 in 9 118 9 2 -15.27 55,77,116 MKPKYHFLNNARYALEGLFA VFFSVLLALFVWGFILYNIY 213 cj0522 3 in 3 167 8 7 -8.37 67,113,143 VAILLIGMTNLGIGFKVFSG FKHIIDLSRFDFAGFKGVFV 214 cj0707 3 in 2 385 5 1 -5.25 23,137,299 LIFFYYFLTWTAFLFCAVFI KENLDLIIQTIQKGIDARKS 215 cj1610 3 in 2 166 3 8 -3.25 50,107,153 MQKLFLTFFYSGSVKKASGT IYGFLLKFNLVFWDINLKDL 216 cj0014c 3 in 1 174 9 4 -20.28 29,97,128 MKKYFQKRYTLAFFIGILAG LWGMEIVRRDIRNRITKEIE 217 cj0232c 3 in 1 136 4 9 -4.90 36,61,113 MKTKAKISSRWLRFRALLID VRKDRLNLHDILTQSCIATK 218 cj0396c 3 in 1 332 6 0 -6.35 179,222,288 MKKIFLTLFCLIFLCACGTK DKISFMGNGKFYYGDKILDL 219 cj0889c 3 in 1 429 9 0 -13.42 29,157,409 MLKTKNIFIVFFVVLALIFG YLEISSTLGYGSSFSFKLSQ 220 cj0952c 3 in 1 239 1 3 -1.63 28,156,196 MMFKTIGFKVSAAIFVVLLI LKARISVKGQDEIALACGYI 221 cj1022c 3 in 1 168 9 1 -11.48 39,85,163 MLEKIFESLLVRSRIVTILP FLAGSILALCVGLYFLHKGG 222 cj1440c 3 in 1 407 2 2 -2.33 232,262,399 VKTVGVVIPIYNVEKYLREC IYFKIFKINIIKKYIRYLFF 223 cj1533c 3 in 1 345 3 0 -3.74 56,94,322 LKVLNFFYENHPKFEVSYER NFFEQGVKFEVISFDKFSLG 224 cj0607 3 out 210 641 2 2 2.61 534,589,620 MIFLKNICKNIGENAILKNV FGFFPARNAANLNPISALSK 225 cj1579c 3 out 56 129 8 9 8.27 31,84,114 MSHIDASHPYFGIFLMLVLA LLGVGFLYAYKKGAFAWQSI 226 cj1569c 3 out 28 98 8 9 8.05 33,55,79 MIEKYFFVAILMFVIGLVGI CVLWYRRKGTLELKSLKEVE 227 cj0179 3 out 18 253 9 5 10.86 74,179,218 MLKKCFYFVFLLLNLNAEAN LDELANFVYILFHRSYFNDK 228 cj0109 3 out 17 184 9 7 12.75 36,120,159 MNFEAIFHFFNSSSIITYIV RKAFELLSIIDSEIKVISSS 229 cj0523 3 out 6 91 8 3 8.56 39,61,83 LLTGVIQSSTVIMAIIVAAL AFLIVLIFPYFIHFLIFYPL 230 cj0679 3 out 5 606 5 1 5.72 403,439,480 MQRQSPEQILKKLEVKAKEE TLPNANAMYLPIEDGKKLKG 231 cj0886c 3 out 5 946 9 1 11.77 35,75,110 MLAPGMGEWVYKANLFLFGE EQLTQNGILSEPDAKGQREI 232 cj0052 3 out 4 93 0 8 0.94 36,59,86 LLPLQLIYQQCFLFFIVQLA IVDIVVMIAVGLFWWKILGF 233 cj1395 3 out 3 258 9 1 9.87 115,140,182 MFYSEILADFIFNLQYENIP KCFGIEQECDKTELDKGLGE 234 cj1147c 3 out 2 316 9 1 9.99 39,61,248 VYKAGEAITVSPNQVGRCIK LFEVLEKEEFDLQRRVDEAR 235 cj0544 3 out 1 129 9 2 9.87 40,62,92 MNYKLSLSPLFVLEIIASVL KQEYQNSNEEIIDVEIIEDR 236 cj1007c 3 out 1 523 1 2 1.87 240,286,314 MKKIIILTFFVVFAFGDVNR LNQNHFEQHHENMYFHARNK 237 cj1236 3 out 1 316 4 3 4.96 47,75,215 MKFSDFFHAWLHESYYKNAV QAKILFFNFDEKFHFFEFQK 238 cj1432c 3 out 1 1031 9 0 10.02 640,959,1022 MIKKILLITPELEYTGALNS LAIVILPYKIAQLYRKKFKK 239 cj1484c 3 out 1 212 5 4 5.56 39,111,200 LVGFDRKSSSYRMKKILQDG ICFALLYYAQRRIKRKKNVR