--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Campylobacter jejuni --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 240 cj1683c 2 in 28 435 1 0 -1.11 274,404 LLELIKVTIKGAKMSNSVTI EQESLKIVRPRQLYLGETSK 241 cj0819 2 in 15 78 1 9 -1.68 26,64 VYFTMLEFIFTLILDFTFYS LELFLLLYLFLGILFLRFYK 242 cj1675 2 in 13 89 4 9 -4.27 38,72 MDESTLVALGVQTFKITLLL MTTTMIDFTENILNQIPTFI 243 cj0051 2 in 11 87 6 9 -6.79 38,74 VKKSFSVFLSRFYFYGLELW ALVMMATLLGKLGVTQFLAE 244 cj0657c 2 in 11 71 5 8 -5.25 18,59 MFFLGLTFIVIGTGFFKTNA FIAPLICGFVQAKWNYHLGF 245 cj1124c 2 in 9 200 4 3 -4.20 32,179 MYEKVFKRIFDFILALVLLV LKRSGVSKEGHVTTEKFNGK 246 cj1184c 2 in 9 374 9 1 -13.00 22,366 MREIKIFLVVVVFTALVYWG FFVILSIFAIGWKRSVWSKL 247 cj0050 2 in 6 74 9 9 -17.69 20,67 MFLPGIAVMLLMPLMLYFLS VFVSLLLLWAGALGLFFWNF 248 cj0318 2 in 6 560 9 1 -9.28 41,463 MDFKNMLHQIGQLYQNLTRK EIAALLQNLIQNDSEFGEKD 249 cj0655c 2 in 5 104 9 9 -12.55 42,91 LVIYFIYLFVFKALNKREKQ SYIWIFLEKKIYIFLPLENL 250 cj0294 2 in 4 219 7 1 -7.85 45,212 MMNDRFTRIKWLVGEEKFQK TASFGLALASLALRKVLAKK 251 cj0726c 2 in 4 327 9 4 -10.09 284,319 MLYIYIKTQNALVQRINFNL LGVMVISIILPLVVFKKKGW 252 cj1506c 2 in 4 700 4 2 -4.06 29,348 MFKSLNIGLKLIFSVAAVVV ITNEVNQIAAAILEDVNKKR 253 cj0018c 2 in 3 55 9 9 -12.00 20,51 MEFLELLLVLIALILIIKKP LLMVFFYVGHKTGALLTIMN 254 cj0267c 2 in 3 176 5 9 -5.08 37,64 VEKLREIVLFYTTHLYLVDY IAFENFNYENNYTIRLVSEC 255 cj0423 2 in 3 75 6 9 -6.28 25,59 MEGASGGSIFVTILLFILYM LIWSFTGSFKQTIIIKEKNE 256 cj0606 2 in 3 390 9 2 -12.67 23,326 MKKKIVLIILIAILGSVGAY DEELIVSSSADGLAPKMKLR 257 cj0068 2 in 2 298 4 2 -4.92 40,145 MQILKSFFKALGCGIKFINT LISKSLIEIAYKTNSSFINA 258 cj1445c 2 in 2 372 9 4 -12.71 40,362 MEENKTLLEKIKDLSIFDSF VLSLIFGIVKFIKMIIEEHK 259 cj1520 2 in 2 108 4 9 -4.11 37,74 VEFQSTRVYFSPFLNFFMVK ECAKKNGLKCFSPFLNFFMV 260 cj0019c 2 in 1 592 8 2 -8.92 30,260 MTNKKSSFLIKFIILSTLVL NISQNVLNGASKLSEKLSSF 261 cj0038c 2 in 1 215 9 0 -23.91 46,68 MDLKSLENNRLYILKRLGIL LESNFKDLEENLNSIKNKLF 262 cj0062c 2 in 1 118 9 9 -17.14 28,50 MRPENYVAFFTVCGFFIGLA EREELKKNEFKERRRNAKRA 263 cj0080 2 in 1 89 0 9 -0.29 33,63 MFYFVVFKGRIYMYLKHLYF IFKSDKEKSTFVLKNLTLEG 264 cj0124c 2 in 1 328 9 5 -21.88 25,64 MKIKLFLLASFIYIALIFAF FKAFLALREKNIKIDLNQLI 265 cj0131 2 in 1 457 7 2 -7.71 27,378 MAKRKGKTYLSVLILVLIAI WIENNIYNVLNDGKKIILGK 266 cj0144 2 in 1 659 3 2 -3.16 31,305 MKSVKLKVSLIANLIAVVCL ISSTVSDIANNILEDVKKKR 267 cj0235c 2 in 1 123 0 9 -0.53 21,68 MITLLIILQFIIVVVICIAV PNTNSIAPSAPQLPSDVNSS 268 cj0246c 2 in 1 375 3 1 -3.00 116,258 MQEYTFALKIGEDYLISPME FEKNVNQLKCYEDVLAKLNQ 269 cj0248 2 in 1 285 1 3 -1.58 92,158 MIGDMNELLLKSVEVLPPLP DLNNLLSKLPNKAKENLNKE 270 cj0673 2 in 1 86 0 9 -0.78 19,80 MLEILITLIIAFILALIFGN AFNALVAIFSFVIFYLQDKL 271 cj0691 2 in 1 163 9 7 -11.75 68,94 MKKFKEFSLRFLFKVSEQPV KEEIPKANLEQYVLDKIIHS 272 cj0784 2 in 1 304 7 0 -8.00 21,137 MKKFLFILSLFCVLSYAYEL NNKDFIVSGFGDSIMFRSID 273 cj0852c 2 in 1 109 9 4 -10.58 50,76 MSNILKEEKNHLENSNSKRQ YEEFKERDELIKEKIQKEKN 274 cj0875 2 in 1 108 9 4 -12.96 43,72 LNKKDYFPQIFFLGSLACGP PHNNKVKTIENLFINFPPYF 275 cj1011 2 in 1 255 9 1 -20.51 200,234 MLELHENLKKILQAKNLETF YSKKTKEFDLDEGKKAKKQT 276 cj1115c 2 in 1 205 6 1 -6.72 39,115 MKDFIAKDGYLSLIILSLVF TRIHIGLNDEIKAGSLLGYF 277 cj1219c 2 in 1 846 0 0 -0.61 26,143 MKKIFYGIVAFVVVLLIALY GAKSTGDKVDKAVNKLLNKI 278 cj1226c 2 in 1 415 9 3 -18.30 26,155 MNKSSIFYTITFIFIFAGVS LYEDGVNLFYFRNLKSVIVK 279 cj1245c 2 in 1 398 0 2 -0.71 18,50 LILAGIIFIFNLILAYLSID VLSDVSRNDLITLLRKYLPK 280 cj1262 2 in 1 411 9 3 -9.44 29,153 MTKNYSIHTKLIILFVVTFF LIYFYDDGKHCFKIFFGDKE 281 cj1376 2 in 1 269 7 2 -7.00 84,178 MKKILFLFCSFFLAFAKPSL ETHGSVISKAMLWMKKLLDL 282 cj1436c 2 in 1 426 6 1 -6.43 35,165 MLLKKYKNLLKNKEVFTLFD ASRTLEENDMVLKSICDVFK 283 cj1522c 2 in 1 296 1 5 -1.96 64,200 MSYDEAFKTLLISSNAKLNL VANFKNALLYEDELKIVKFD 284 cj1564 2 in 1 662 8 2 -8.00 38,312 MLKITKIKRKIMNSIKIKLS ISSTVSDIANNILEDVKKKR 285 cj1623 2 in 1 176 9 9 -25.51 126,152 VILMAFMNFSGFFYARNDLR SFSKEEMKEFLSQRMKKYTK 286 cj0936 2 out 58 112 4 9 4.13 58,104 MKKVLFLLLACTAVAFAAET VIYALVIALIALYANPFIVL 287 cj0533 2 out 16 387 1 0 1.81 276,330 MNIHEYQAKAIFVDNGIPTL KNIKAATNLKNGAELVKSLV 288 cj0672 2 out 10 62 1 9 1.41 26,51 MRKGYPMDIIFALLLLLAFG LVLSLILALYLFYALLYPEK 289 cj0986c 2 out 5 62 9 9 13.85 19,49 MSAFWSITFVILSFNLWVVS ISAILAQFVLPRREKFIQGE 290 cj0288c 2 out 4 364 9 1 17.50 279,301 LKTFLVCALEPSANLHLKEV FLKEYLQFGSAKNLAKILNE 291 cj0656c 2 out 4 86 3 9 3.67 30,81 MWFCSSKMELSFRIWLGGLG SLLSIIGFFLMFINLVNINP 292 cj0188c 2 out 3 456 8 0 8.50 175,254 MKAIIDNIKILEQNAINKGL KYKFNKNSFDALKLIKGLKC 293 cj0516 2 out 3 230 5 1 5.46 28,181 MIYKKIKALYFWIFFVLSVA WLENTRKKMQELLDQERAKL 294 cj0564 2 out 3 68 2 9 2.88 26,55 MGIILGILSLIAGFVAIVLM NIIFCAIYLITILALVLWRK 295 cj1077 2 out 2 100 1 7 1.32 30,75 MKKAFILIESISAITIISLI GIFQFQKLYFQDQNYSVYFK 296 cj1487c 2 out 2 287 9 4 16.05 30,82 MQWLNLEDNVNLLSLIGAIL TLNDIQKEAVGEYVISLSRG 297 cj1527 2 out 2 94 5 6 5.32 28,83 MALKIVISSYAGLLLLACIY YSVITYVVVNCHLDSFLFYL 298 cj1535c 2 out 2 406 1 2 1.11 197,378 MLNNTLFFKQSEIHTISSYA NTYDQPGVEVGKLILKNILN 299 cj0262c 2 out 1 665 2 1 2.24 34,315 MQSINSGKSVGISAKLTLWV ISSTVSDIANNILEDVKKKR 300 cj0266c 2 out 1 172 9 8 18.94 29,59 VFLMHFTIFHIIAFIILLIC ASVPFPPTFNNPEFYHTLKC 301 cj0278 2 out 1 49 0 9 0.00 22,46 LNENFIKNLKFLYVLFPRLK ISIISKFIKLIFVIISPNLC 302 cj0352 2 out 1 265 9 2 16.00 20,170 MRLLVLFFLILPLYSVELIS FEENKKRIQNLIEQRQKGKK 303 cj0362 2 out 1 150 9 6 13.39 109,150 MTEWINDYYFWIKWVHYLAF YNEFPTIMFIIIALMMVVRP 304 cj0515 2 out 1 398 3 1 4.00 18,324 LKILLTLIFSIVVLFGRGEI IKVLFSDGKIGWVNKDDLQK 305 cj0690c 2 out 1 1250 1 0 2.00 285,1131 MNYYQELKKYLNNNLFTSYS ISTFKVLNEKQSEYITLLKT 306 cj0757 2 out 1 271 0 0 0.50 178,260 VLDMKENMMKSRDKKDLILE ILAGSVYTDYKKILQYIKEA 307 cj0808c 2 out 1 101 4 4 4.06 22,91 MELDQILLYAFIFLNLFALF LNFIFLLALLSVFLGWKLKL 308 cj0818 2 out 1 75 3 1 3.78 21,56 MKKVAFFLLFLFLSCTVLNA APAPGGSTYNSKIDMMAARC 309 cj1042c 2 out 1 296 3 2 3.50 109,183 MNKILSLPEDLKQLKGVNYK KYEQTPKQYQKTKNLYFLSK 310 cj1053c 2 out 1 116 9 1 15.73 22,48 MSRVFLYFLIILILALITFA DNNQSFNSLIIDIKDCRLND 311 cj1127c 2 out 1 365 2 1 2.91 37,287 MQKLGIFIYSLGSGGAERVV TRAKAFDKVKIARDALKYLL 312 cj1134 2 out 1 301 2 3 2.04 47,146 LPKAYLMKNSDRIYLSLYYI EYFFFHRRFASYNKEIYKDA 313 cj1342c 2 out 1 413 9 0 19.00 207,229 MIVSKAYEIDSCDDVELGIK EDLLYQFSEKDDKMSLKIDK 314 cj1356c 2 out 1 200 9 3 17.33 170,200 LFCQNITNFDNQKGVKMINK KQFAVLGVGVVVTLLLAYLS 315 cj1390 2 out 1 151 9 9 15.53 51,118 VIAICQYIDHGPGSGNVIMA TAIKMNVPVSNGDFNFCGYY 316 cj1469c 2 out 1 138 1 3 1.25 76,127 SKLLFFYGFFFAFKNGISIS LFLALGIFLPMWELSSGVNF