Bottom -
Previous -
Next -
CUBIC -
PP home
Transmembrane helices for camje (Campylobacter jejuni)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 240 | cj1683c | 2 | in | 28 | |ali|phd|phdHtm| | 435 | 1 | 0 | -1.11 | 274,404 | LLELIKVTIKGAKMSNSVTI |
| 241 | cj0819 | 2 | in | 15 | |ali|phd|phdHtm| | 78 | 1 | 9 | -1.68 | 26,64 | VYFTMLEFIFTLILDFTFYS |
| 242 | cj1675 | 2 | in | 13 | |ali|phd|phdHtm| | 89 | 4 | 9 | -4.27 | 38,72 | MDESTLVALGVQTFKITLLL |
| 243 | cj0051 | 2 | in | 11 | |ali|phd|phdHtm| | 87 | 6 | 9 | -6.79 | 38,74 | VKKSFSVFLSRFYFYGLELW |
| 244 | cj0657c | 2 | in | 11 | |ali|phd|phdHtm| | 71 | 5 | 8 | -5.25 | 18,59 | MFFLGLTFIVIGTGFFKTNA |
| 245 | cj1124c | 2 | in | 9 | |ali|phd|phdHtm| | 200 | 4 | 3 | -4.20 | 32,179 | MYEKVFKRIFDFILALVLLV |
| 246 | cj1184c | 2 | in | 9 | |ali|phd|phdHtm| | 374 | 9 | 1 | -13.00 | 22,366 | MREIKIFLVVVVFTALVYWG |
| 247 | cj0050 | 2 | in | 6 | |ali|phd|phdHtm| | 74 | 9 | 9 | -17.69 | 20,67 | MFLPGIAVMLLMPLMLYFLS |
| 248 | cj0318 | 2 | in | 6 | |ali|phd|phdHtm| | 560 | 9 | 1 | -9.28 | 41,463 | MDFKNMLHQIGQLYQNLTRK |
| 249 | cj0655c | 2 | in | 5 | |ali|phd|phdHtm| | 104 | 9 | 9 | -12.55 | 42,91 | LVIYFIYLFVFKALNKREKQ |
| 250 | cj0294 | 2 | in | 4 | |ali|phd|phdHtm| | 219 | 7 | 1 | -7.85 | 45,212 | MMNDRFTRIKWLVGEEKFQK |
| 251 | cj0726c | 2 | in | 4 | |ali|phd|phdHtm| | 327 | 9 | 4 | -10.09 | 284,319 | MLYIYIKTQNALVQRINFNL |
| 252 | cj1506c | 2 | in | 4 | |ali|phd|phdHtm| | 700 | 4 | 2 | -4.06 | 29,348 | MFKSLNIGLKLIFSVAAVVV |
| 253 | cj0018c | 2 | in | 3 | |ali|phd|phdHtm| | 55 | 9 | 9 | -12.00 | 20,51 | MEFLELLLVLIALILIIKKP |
| 254 | cj0267c | 2 | in | 3 | |ali|phd|phdHtm| | 176 | 5 | 9 | -5.08 | 37,64 | VEKLREIVLFYTTHLYLVDY |
| 255 | cj0423 | 2 | in | 3 | |ali|phd|phdHtm| | 75 | 6 | 9 | -6.28 | 25,59 | MEGASGGSIFVTILLFILYM |
| 256 | cj0606 | 2 | in | 3 | |ali|phd|phdHtm| | 390 | 9 | 2 | -12.67 | 23,326 | MKKKIVLIILIAILGSVGAY |
| 257 | cj0068 | 2 | in | 2 | |ali|phd|phdHtm| | 298 | 4 | 2 | -4.92 | 40,145 | MQILKSFFKALGCGIKFINT |
| 258 | cj1445c | 2 | in | 2 | |ali|phd|phdHtm| | 372 | 9 | 4 | -12.71 | 40,362 | MEENKTLLEKIKDLSIFDSF |
| 259 | cj1520 | 2 | in | 2 | |ali|phd|phdHtm| | 108 | 4 | 9 | -4.11 | 37,74 | VEFQSTRVYFSPFLNFFMVK |
| 260 | cj0019c | 2 | in | 1 | |ali|phd|phdHtm| | 592 | 8 | 2 | -8.92 | 30,260 | MTNKKSSFLIKFIILSTLVL |
| 261 | cj0038c | 2 | in | 1 | |ali|phd|phdHtm| | 215 | 9 | 0 | -23.91 | 46,68 | MDLKSLENNRLYILKRLGIL |
| 262 | cj0062c | 2 | in | 1 | |ali|phd|phdHtm| | 118 | 9 | 9 | -17.14 | 28,50 | MRPENYVAFFTVCGFFIGLA |
| 263 | cj0080 | 2 | in | 1 | |ali|phd|phdHtm| | 89 | 0 | 9 | -0.29 | 33,63 | MFYFVVFKGRIYMYLKHLYF |
| 264 | cj0124c | 2 | in | 1 | |ali|phd|phdHtm| | 328 | 9 | 5 | -21.88 | 25,64 | MKIKLFLLASFIYIALIFAF |
| 265 | cj0131 | 2 | in | 1 | |ali|phd|phdHtm| | 457 | 7 | 2 | -7.71 | 27,378 | MAKRKGKTYLSVLILVLIAI |
| 266 | cj0144 | 2 | in | 1 | |ali|phd|phdHtm| | 659 | 3 | 2 | -3.16 | 31,305 | MKSVKLKVSLIANLIAVVCL |
| 267 | cj0235c | 2 | in | 1 | |ali|phd|phdHtm| | 123 | 0 | 9 | -0.53 | 21,68 | MITLLIILQFIIVVVICIAV |
| 268 | cj0246c | 2 | in | 1 | |ali|phd|phdHtm| | 375 | 3 | 1 | -3.00 | 116,258 | MQEYTFALKIGEDYLISPME |
| 269 | cj0248 | 2 | in | 1 | |ali|phd|phdHtm| | 285 | 1 | 3 | -1.58 | 92,158 | MIGDMNELLLKSVEVLPPLP |
| 270 | cj0673 | 2 | in | 1 | |ali|phd|phdHtm| | 86 | 0 | 9 | -0.78 | 19,80 | MLEILITLIIAFILALIFGN |
| 271 | cj0691 | 2 | in | 1 | |ali|phd|phdHtm| | 163 | 9 | 7 | -11.75 | 68,94 | MKKFKEFSLRFLFKVSEQPV |
| 272 | cj0784 | 2 | in | 1 | |ali|phd|phdHtm| | 304 | 7 | 0 | -8.00 | 21,137 | MKKFLFILSLFCVLSYAYEL |
| 273 | cj0852c | 2 | in | 1 | |ali|phd|phdHtm| | 109 | 9 | 4 | -10.58 | 50,76 | MSNILKEEKNHLENSNSKRQ |
| 274 | cj0875 | 2 | in | 1 | |ali|phd|phdHtm| | 108 | 9 | 4 | -12.96 | 43,72 | LNKKDYFPQIFFLGSLACGP |
| 275 | cj1011 | 2 | in | 1 | |ali|phd|phdHtm| | 255 | 9 | 1 | -20.51 | 200,234 | MLELHENLKKILQAKNLETF |
| 276 | cj1115c | 2 | in | 1 | |ali|phd|phdHtm| | 205 | 6 | 1 | -6.72 | 39,115 | MKDFIAKDGYLSLIILSLVF |
| 277 | cj1219c | 2 | in | 1 | |ali|phd|phdHtm| | 846 | 0 | 0 | -0.61 | 26,143 | MKKIFYGIVAFVVVLLIALY |
| 278 | cj1226c | 2 | in | 1 | |ali|phd|phdHtm| | 415 | 9 | 3 | -18.30 | 26,155 | MNKSSIFYTITFIFIFAGVS |
| 279 | cj1245c | 2 | in | 1 | |ali|phd|phdHtm| | 398 | 0 | 2 | -0.71 | 18,50 | LILAGIIFIFNLILAYLSID |
| 280 | cj1262 | 2 | in | 1 | |ali|phd|phdHtm| | 411 | 9 | 3 | -9.44 | 29,153 | MTKNYSIHTKLIILFVVTFF |
| 281 | cj1376 | 2 | in | 1 | |ali|phd|phdHtm| | 269 | 7 | 2 | -7.00 | 84,178 | MKKILFLFCSFFLAFAKPSL |
| 282 | cj1436c | 2 | in | 1 | |ali|phd|phdHtm| | 426 | 6 | 1 | -6.43 | 35,165 | MLLKKYKNLLKNKEVFTLFD |
| 283 | cj1522c | 2 | in | 1 | |ali|phd|phdHtm| | 296 | 1 | 5 | -1.96 | 64,200 | MSYDEAFKTLLISSNAKLNL |
| 284 | cj1564 | 2 | in | 1 | |ali|phd|phdHtm| | 662 | 8 | 2 | -8.00 | 38,312 | MLKITKIKRKIMNSIKIKLS |
| 285 | cj1623 | 2 | in | 1 | |ali|phd|phdHtm| | 176 | 9 | 9 | -25.51 | 126,152 | VILMAFMNFSGFFYARNDLR |
| 286 | cj0936 | 2 | out | 58 | |ali|phd|phdHtm| | 112 | 4 | 9 | 4.13 | 58,104 | MKKVLFLLLACTAVAFAAET |
| 287 | cj0533 | 2 | out | 16 | |ali|phd|phdHtm| | 387 | 1 | 0 | 1.81 | 276,330 | MNIHEYQAKAIFVDNGIPTL |
| 288 | cj0672 | 2 | out | 10 | |ali|phd|phdHtm| | 62 | 1 | 9 | 1.41 | 26,51 | MRKGYPMDIIFALLLLLAFG |
| 289 | cj0986c | 2 | out | 5 | |ali|phd|phdHtm| | 62 | 9 | 9 | 13.85 | 19,49 | MSAFWSITFVILSFNLWVVS |
| 290 | cj0288c | 2 | out | 4 | |ali|phd|phdHtm| | 364 | 9 | 1 | 17.50 | 279,301 | LKTFLVCALEPSANLHLKEV |
| 291 | cj0656c | 2 | out | 4 | |ali|phd|phdHtm| | 86 | 3 | 9 | 3.67 | 30,81 | MWFCSSKMELSFRIWLGGLG |
| 292 | cj0188c | 2 | out | 3 | |ali|phd|phdHtm| | 456 | 8 | 0 | 8.50 | 175,254 | MKAIIDNIKILEQNAINKGL |
| 293 | cj0516 | 2 | out | 3 | |ali|phd|phdHtm| | 230 | 5 | 1 | 5.46 | 28,181 | MIYKKIKALYFWIFFVLSVA |
| 294 | cj0564 | 2 | out | 3 | |ali|phd|phdHtm| | 68 | 2 | 9 | 2.88 | 26,55 | MGIILGILSLIAGFVAIVLM |
| 295 | cj1077 | 2 | out | 2 | |ali|phd|phdHtm| | 100 | 1 | 7 | 1.32 | 30,75 | MKKAFILIESISAITIISLI |
| 296 | cj1487c | 2 | out | 2 | |ali|phd|phdHtm| | 287 | 9 | 4 | 16.05 | 30,82 | MQWLNLEDNVNLLSLIGAIL |
| 297 | cj1527 | 2 | out | 2 | |ali|phd|phdHtm| | 94 | 5 | 6 | 5.32 | 28,83 | MALKIVISSYAGLLLLACIY |
| 298 | cj1535c | 2 | out | 2 | |ali|phd|phdHtm| | 406 | 1 | 2 | 1.11 | 197,378 | MLNNTLFFKQSEIHTISSYA |
| 299 | cj0262c | 2 | out | 1 | |ali|phd|phdHtm| | 665 | 2 | 1 | 2.24 | 34,315 | MQSINSGKSVGISAKLTLWV |
| 300 | cj0266c | 2 | out | 1 | |ali|phd|phdHtm| | 172 | 9 | 8 | 18.94 | 29,59 | VFLMHFTIFHIIAFIILLIC |
| 301 | cj0278 | 2 | out | 1 | |ali|phd|phdHtm| | 49 | 0 | 9 | 0.00 | 22,46 | LNENFIKNLKFLYVLFPRLK |
| 302 | cj0352 | 2 | out | 1 | |ali|phd|phdHtm| | 265 | 9 | 2 | 16.00 | 20,170 | MRLLVLFFLILPLYSVELIS |
| 303 | cj0362 | 2 | out | 1 | |ali|phd|phdHtm| | 150 | 9 | 6 | 13.39 | 109,150 | MTEWINDYYFWIKWVHYLAF |
| 304 | cj0515 | 2 | out | 1 | |ali|phd|phdHtm| | 398 | 3 | 1 | 4.00 | 18,324 | LKILLTLIFSIVVLFGRGEI |
| 305 | cj0690c | 2 | out | 1 | |ali|phd|phdHtm| | 1250 | 1 | 0 | 2.00 | 285,1131 | MNYYQELKKYLNNNLFTSYS |
| 306 | cj0757 | 2 | out | 1 | |ali|phd|phdHtm| | 271 | 0 | 0 | 0.50 | 178,260 | VLDMKENMMKSRDKKDLILE |
| 307 | cj0808c | 2 | out | 1 | |ali|phd|phdHtm| | 101 | 4 | 4 | 4.06 | 22,91 | MELDQILLYAFIFLNLFALF |
| 308 | cj0818 | 2 | out | 1 | |ali|phd|phdHtm| | 75 | 3 | 1 | 3.78 | 21,56 | MKKVAFFLLFLFLSCTVLNA |
| 309 | cj1042c | 2 | out | 1 | |ali|phd|phdHtm| | 296 | 3 | 2 | 3.50 | 109,183 | MNKILSLPEDLKQLKGVNYK |
| 310 | cj1053c | 2 | out | 1 | |ali|phd|phdHtm| | 116 | 9 | 1 | 15.73 | 22,48 | MSRVFLYFLIILILALITFA |
| 311 | cj1127c | 2 | out | 1 | |ali|phd|phdHtm| | 365 | 2 | 1 | 2.91 | 37,287 | MQKLGIFIYSLGSGGAERVV |
| 312 | cj1134 | 2 | out | 1 | |ali|phd|phdHtm| | 301 | 2 | 3 | 2.04 | 47,146 | LPKAYLMKNSDRIYLSLYYI |
| 313 | cj1342c | 2 | out | 1 | |ali|phd|phdHtm| | 413 | 9 | 0 | 19.00 | 207,229 | MIVSKAYEIDSCDDVELGIK |
| 314 | cj1356c | 2 | out | 1 | |ali|phd|phdHtm| | 200 | 9 | 3 | 17.33 | 170,200 | LFCQNITNFDNQKGVKMINK |
| 315 | cj1390 | 2 | out | 1 | |ali|phd|phdHtm| | 151 | 9 | 9 | 15.53 | 51,118 | VIAICQYIDHGPGSGNVIMA |
| 316 | cj1469c | 2 | out | 1 | |ali|phd|phdHtm| | 138 | 1 | 3 | 1.25 | 76,127 | SKLLFFYGFFFAFKNGISIS |
Top -
Previous -
Next -
CUBIC -
PP home