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Transmembrane helices for camje (Campylobacter jejuni)-- Low Reliability Report

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN

28 cj1167 1 in 46 |ali|phd|phdHtm| 308 1 2 -2.00 127 MAKIGIVGLGYVGAASAYSI

29 cj1034c 1 in 27 |ali|phd|phdHtm| 268 3 3 -4.00 112 MQIVQTLETINVNTDDISVF

30 cj1727c 1 in 26 |ali|phd|phdHtm| 423 1 1 -1.48 95 MNFNKETLALHGAYNFDTQR

31 cj1393 1 in 24 |ali|phd|phdHtm| 348 4 2 -4.62 58 LEKYRELRKTDRVLSYGARG

32 cj1344c 1 in 17 |ali|phd|phdHtm| 335 4 3 -4.80 100 MKNLILAIESSCDDSSIAII

33 cj0827 1 in 16 |ali|phd|phdHtm| 241 4 3 -4.67 199 LMKIKIIFSYDGSAFLGSAT

34 cj1008c 1 in 13 |ali|phd|phdHtm| 351 5 2 -5.44 109 MQVEVKLKENAYKVYIDELE

35 cj0303c 1 in 4 |ali|phd|phdHtm| 249 2 4 -2.76 31 MKKFVVFFGILLFVSCLNAQ

36 cj0659c 1 in 4 |ali|phd|phdHtm| 182 4 4 -4.41 37 MNKIEVFLQNLNPREKFLFI

37 cj1302 1 in 4 |ali|phd|phdHtm| 520 3 1 -4.00 180 MNLFSPHLKRNELIKFAKEL

38 cj0365c 1 in 3 |ali|phd|phdHtm| 492 5 1 -5.00 324 MNKIISISAIASFTLLISAC

39 cj0034c 1 in 2 |ali|phd|phdHtm| 233 0 4 -0.79 24 MKTNNIFMALAIVLASLILA

40 cj0221 1 in 2 |ali|phd|phdHtm| 40 9 9 -10.17 36 LEFISGYVGAMDLKGDIASL

41 cj0983 1 in 2 |ali|phd|phdHtm| 372 4 2 -4.00 370 MKKGIFLSIGIAVLFSACGN

42 cj1630 1 in 2 |ali|phd|phdHtm| 227 4 3 -4.58 29 MKTLFLNHKYQASYITFIVF

43 cj0073c 1 in 1 |ali|phd|phdHtm| 218 9 4 -10.00 215 MSKIDEISSKSKANILEHLK

44 cj0099 1 in 1 |ali|phd|phdHtm| 217 2 4 -2.00 139 MEKGLKVKIVCVESIDSTHL

45 cj0181 1 in 1 |ali|phd|phdHtm| 248 4 3 -4.67 24 MKSSVIFGFVLSLILHTLVL

46 cj0353c 1 in 1 |ali|phd|phdHtm| 486 1 1 -1.71 437 MAKKTAVVDLGSNSIRMVIF

47 cj0431 1 in 1 |ali|phd|phdHtm| 204 9 4 -17.00 22 MIKAFSLLEFVFIILILGIV

48 cj0630c 1 in 1 |ali|phd|phdHtm| 321 9 2 -14.00 250 MYRKELQILLSKDSIPNFFF

49 cj0843c 1 in 1 |ali|phd|phdHtm| 541 6 1 -6.00 413 VIKKILVFLFIFSSLNATQY

50 cj0872 1 in 1 |ali|phd|phdHtm| 223 8 4 -8.50 34 LKILFNQGYNMRNFFCKFVL

51 cj0878 1 in 1 |ali|phd|phdHtm| 48 9 9 -17.31 44 MKNLSIQEKKDLDNCVFQNL

52 cj1113 1 in 1 |ali|phd|phdHtm| 265 1 3 -2.00 93 MQKEFFQELQDILYEKNITI

53 cj1289 1 in 1 |ali|phd|phdHtm| 271 8 3 -8.57 25 MKKILLSFAFFASLASANTI

54 cj1300 1 in 1 |ali|phd|phdHtm| 297 4 3 -4.00 116 MKENIEKLFQAIAQKNPIHS

55 cj1305c 1 in 1 |ali|phd|phdHtm| 405 9 2 -16.00 213 MLINQTFEIDSCDDVELNIK

56 cj1316c 1 in 1 |ali|phd|phdHtm| 378 2 1 -2.00 163 MKFCKKCVMPDTKPDLHFDE

57 cj1381 1 in 1 |ali|phd|phdHtm| 176 9 5 -13.00 22 MSKFALILSFFIALFMSACT

58 cj1410c 1 in 1 |ali|phd|phdHtm| 139 9 7 -20.72 54 MKRVRTKIRANFRRRVKRTL

59 cj1461 1 in 1 |ali|phd|phdHtm| 227 6 3 -6.00 113 MNDEFISVKDFFNHNEKRKK

60 cj1472c 1 in 1 |ali|phd|phdHtm| 195 4 4 -4.19 39 MQERIKELELRYKYFLLKKY

61 cj1552c 1 in 1 |ali|phd|phdHtm| 488 1 1 -1.07 60 MIRTVMDFKFVLRLLEANQF

62 cj1725 1 in 1 |ali|phd|phdHtm| 199 9 5 -12.59 172 MKKSIAIIGGSIAGLSAALF

63 cj0954c 1 unk 62 |ali|phd|phdHtm| 256 0 4 0.00 18 MTLVLIILVVLVFYWYYKTW

64 cj0127c 1 out 23 |ali|phd|phdHtm| 280 3 2 3.79 225 MNFADIFSKIRRQQPSVKEA

65 cj0192c 1 out 23 |ali|phd|phdHtm| 194 9 5 10.80 105 MFIPYVIEKSSRGERSYDIY

66 cj1076 1 out 20 |ali|phd|phdHtm| 243 5 3 5.76 170 MLYILANGSMATALAYGLKD

67 cj0534 1 out 19 |ali|phd|phdHtm| 289 8 3 8.04 96 MSILVNKNTKVIVQGFTGKE

68 cj1399c 1 out 16 |ali|phd|phdHtm| 497 7 1 7.80 374 MAKLSNEELKNILEDRIKKL

69 cj1267c 1 out 15 |ali|phd|phdHtm| 379 9 2 21.27 372 MIDYHQIESRLSALEKLPSL

70 cj1634c 1 out 15 |ali|phd|phdHtm| 362 4 2 4.14 344 VNTFGTRLKFTSFGESHGVA

71 cj0102 1 out 14 |ali|phd|phdHtm| 141 9 6 17.24 28 MFEDMHPSIMLATMAIFLAM

72 cj1652c 1 out 13 |ali|phd|phdHtm| 250 0 3 0.71 77 VKIGVFDSGVGGLSVLKSLY

73 cj0154c 1 out 10 |ali|phd|phdHtm| 274 9 3 13.40 129 MLYFIPTPIGNLSDISFRAL

74 cj0577c 1 out 7 |ali|phd|phdHtm| 342 8 2 8.81 314 MNKDLLLSSYDYTLANELIA

75 cj0683 1 out 7 |ali|phd|phdHtm| 145 2 6 2.86 26 MNKAFTLLELVFVILILGIL

76 cj0716 1 out 7 |ali|phd|phdHtm| 446 9 1 14.00 100 MWAKNSWKNYPIKQQPIYPD

77 cj1346c 1 out 7 |ali|phd|phdHtm| 356 7 2 7.92 101 MILFGSTGSIGVNALKLAAL

78 cj0453 1 out 5 |ali|phd|phdHtm| 430 9 2 10.68 323 MKTQMNYAKEGIFTKEMQIV

79 cj1150c 1 out 5 |ali|phd|phdHtm| 461 9 1 9.00 295 MLEFLSQQKPKILIIGDFMV

80 cj0641 1 out 4 |ali|phd|phdHtm| 286 8 3 8.80 216 MQNKIDYKNIKKIGLVTRPN

81 cj1553c 1 out 4 |ali|phd|phdHtm| 500 9 1 9.60 374 MAKKKEIKLEDALWKSADKL

82 cj1094c 1 out 3 |ali|phd|phdHtm| 90 9 9 24.00 25 MAENSILTSLLPLVVLFAIF

83 cj1433c 1 out 3 |ali|phd|phdHtm| 368 8 2 8.00 198 MQRFKKWFLSIIKNFKQHEK

84 cj0786 1 unk 2 |ali|phd|phdHtm| 57 0 9 0.00 18 MVFLIPLLIIIGVIFGIDYV

85 cj0811 1 out 2 |ali|phd|phdHtm| 308 5 3 5.38 42 MNEEKNYELWLDNYFFKPNF

86 cj0945c 1 out 2 |ali|phd|phdHtm| 447 9 2 11.24 63 MFDKLEKILAYDNVFLSGGA

87 cj0079c 1 unk 1 |ali|phd|phdHtm| 268 0 3 0.00 21 MQKIIVFILCCFMTFFLYAC

88 cj0177 1 unk 1 |ali|phd|phdHtm| 283 0 3 0.00 21 MKFYTILSILFISFMLSACA

89 cj0456c 1 out 1 |ali|phd|phdHtm| 319 0 2 0.00 171 MLFLLKKIFPQLFISIILED

90 cj0538 1 out 1 |ali|phd|phdHtm| 185 2 3 2.63 144 MKYQLRFGGEGGQGVITAGE

91 cj0566 1 out 1 |ali|phd|phdHtm| 488 9 1 16.00 345 MENICQFIIENIDKNSLNTK

92 cj0769c 1 unk 1 |ali|phd|phdHtm| 220 0 4 0.00 18 MKIIFLTFFIVINYIQAASL

93 cj0939c 1 out 1 |ali|phd|phdHtm| 126 9 8 10.95 80 MLIIGHKLLKNLDFSFIESV

94 cj1195c 1 out 1 |ali|phd|phdHtm| 392 8 2 8.00 316 MIIKNAKIYGDSLQDIEIKE

95 cj1275c 1 unk 1 |ali|phd|phdHtm| 397 0 2 0.00 21 MRKNILIFFCFFLFVDISLA

96 cj1281 1 out 1 |ali|phd|phdHtm| 31 9 9 11.11 22 LHFFLRGFDKFKILVYNYSF

97 cj1328 1 out 1 |ali|phd|phdHtm| 384 0 2 0.00 126 VSKRKICIVSATRAEWYLLR

98 cj1451 1 out 1 |ali|phd|phdHtm| 229 9 4 14.33 169 MTNIEILENMLKLQQKLNDE

99 cj1488c 1 out 1 |ali|phd|phdHtm| 87 2 8 2.90 51 MEHLSIVFDVIKNLITFDLA

100 cj1674 1 out 1 |ali|phd|phdHtm| 286 9 3 20.45 71 MKKITIAHSPDADDIFMYMA

num	id	nhtm	top	nali	ali\|phd\|phdHtm	len1	riTop	riMod	topD	htmCN	seqN
28	cj1167	1	in	46	\|ali\|phd\|phdHtm\|	308	1	2	-2.00	127	MAKIGIVGLGYVGAASAYSI
29	cj1034c	1	in	27	\|ali\|phd\|phdHtm\|	268	3	3	-4.00	112	MQIVQTLETINVNTDDISVF
30	cj1727c	1	in	26	\|ali\|phd\|phdHtm\|	423	1	1	-1.48	95	MNFNKETLALHGAYNFDTQR
31	cj1393	1	in	24	\|ali\|phd\|phdHtm\|	348	4	2	-4.62	58	LEKYRELRKTDRVLSYGARG
32	cj1344c	1	in	17	\|ali\|phd\|phdHtm\|	335	4	3	-4.80	100	MKNLILAIESSCDDSSIAII
33	cj0827	1	in	16	\|ali\|phd\|phdHtm\|	241	4	3	-4.67	199	LMKIKIIFSYDGSAFLGSAT
34	cj1008c	1	in	13	\|ali\|phd\|phdHtm\|	351	5	2	-5.44	109	MQVEVKLKENAYKVYIDELE
35	cj0303c	1	in	4	\|ali\|phd\|phdHtm\|	249	2	4	-2.76	31	MKKFVVFFGILLFVSCLNAQ
36	cj0659c	1	in	4	\|ali\|phd\|phdHtm\|	182	4	4	-4.41	37	MNKIEVFLQNLNPREKFLFI
37	cj1302	1	in	4	\|ali\|phd\|phdHtm\|	520	3	1	-4.00	180	MNLFSPHLKRNELIKFAKEL
38	cj0365c	1	in	3	\|ali\|phd\|phdHtm\|	492	5	1	-5.00	324	MNKIISISAIASFTLLISAC
39	cj0034c	1	in	2	\|ali\|phd\|phdHtm\|	233	0	4	-0.79	24	MKTNNIFMALAIVLASLILA
40	cj0221	1	in	2	\|ali\|phd\|phdHtm\|	40	9	9	-10.17	36	LEFISGYVGAMDLKGDIASL
41	cj0983	1	in	2	\|ali\|phd\|phdHtm\|	372	4	2	-4.00	370	MKKGIFLSIGIAVLFSACGN
42	cj1630	1	in	2	\|ali\|phd\|phdHtm\|	227	4	3	-4.58	29	MKTLFLNHKYQASYITFIVF
43	cj0073c	1	in	1	\|ali\|phd\|phdHtm\|	218	9	4	-10.00	215	MSKIDEISSKSKANILEHLK
44	cj0099	1	in	1	\|ali\|phd\|phdHtm\|	217	2	4	-2.00	139	MEKGLKVKIVCVESIDSTHL
45	cj0181	1	in	1	\|ali\|phd\|phdHtm\|	248	4	3	-4.67	24	MKSSVIFGFVLSLILHTLVL
46	cj0353c	1	in	1	\|ali\|phd\|phdHtm\|	486	1	1	-1.71	437	MAKKTAVVDLGSNSIRMVIF
47	cj0431	1	in	1	\|ali\|phd\|phdHtm\|	204	9	4	-17.00	22	MIKAFSLLEFVFIILILGIV
48	cj0630c	1	in	1	\|ali\|phd\|phdHtm\|	321	9	2	-14.00	250	MYRKELQILLSKDSIPNFFF
49	cj0843c	1	in	1	\|ali\|phd\|phdHtm\|	541	6	1	-6.00	413	VIKKILVFLFIFSSLNATQY
50	cj0872	1	in	1	\|ali\|phd\|phdHtm\|	223	8	4	-8.50	34	LKILFNQGYNMRNFFCKFVL
51	cj0878	1	in	1	\|ali\|phd\|phdHtm\|	48	9	9	-17.31	44	MKNLSIQEKKDLDNCVFQNL
52	cj1113	1	in	1	\|ali\|phd\|phdHtm\|	265	1	3	-2.00	93	MQKEFFQELQDILYEKNITI
53	cj1289	1	in	1	\|ali\|phd\|phdHtm\|	271	8	3	-8.57	25	MKKILLSFAFFASLASANTI
54	cj1300	1	in	1	\|ali\|phd\|phdHtm\|	297	4	3	-4.00	116	MKENIEKLFQAIAQKNPIHS
55	cj1305c	1	in	1	\|ali\|phd\|phdHtm\|	405	9	2	-16.00	213	MLINQTFEIDSCDDVELNIK
56	cj1316c	1	in	1	\|ali\|phd\|phdHtm\|	378	2	1	-2.00	163	MKFCKKCVMPDTKPDLHFDE
57	cj1381	1	in	1	\|ali\|phd\|phdHtm\|	176	9	5	-13.00	22	MSKFALILSFFIALFMSACT
58	cj1410c	1	in	1	\|ali\|phd\|phdHtm\|	139	9	7	-20.72	54	MKRVRTKIRANFRRRVKRTL
59	cj1461	1	in	1	\|ali\|phd\|phdHtm\|	227	6	3	-6.00	113	MNDEFISVKDFFNHNEKRKK
60	cj1472c	1	in	1	\|ali\|phd\|phdHtm\|	195	4	4	-4.19	39	MQERIKELELRYKYFLLKKY
61	cj1552c	1	in	1	\|ali\|phd\|phdHtm\|	488	1	1	-1.07	60	MIRTVMDFKFVLRLLEANQF
62	cj1725	1	in	1	\|ali\|phd\|phdHtm\|	199	9	5	-12.59	172	MKKSIAIIGGSIAGLSAALF
63	cj0954c	1	unk	62	\|ali\|phd\|phdHtm\|	256	0	4	0.00	18	MTLVLIILVVLVFYWYYKTW
64	cj0127c	1	out	23	\|ali\|phd\|phdHtm\|	280	3	2	3.79	225	MNFADIFSKIRRQQPSVKEA
65	cj0192c	1	out	23	\|ali\|phd\|phdHtm\|	194	9	5	10.80	105	MFIPYVIEKSSRGERSYDIY
66	cj1076	1	out	20	\|ali\|phd\|phdHtm\|	243	5	3	5.76	170	MLYILANGSMATALAYGLKD
67	cj0534	1	out	19	\|ali\|phd\|phdHtm\|	289	8	3	8.04	96	MSILVNKNTKVIVQGFTGKE
68	cj1399c	1	out	16	\|ali\|phd\|phdHtm\|	497	7	1	7.80	374	MAKLSNEELKNILEDRIKKL
69	cj1267c	1	out	15	\|ali\|phd\|phdHtm\|	379	9	2	21.27	372	MIDYHQIESRLSALEKLPSL
70	cj1634c	1	out	15	\|ali\|phd\|phdHtm\|	362	4	2	4.14	344	VNTFGTRLKFTSFGESHGVA
71	cj0102	1	out	14	\|ali\|phd\|phdHtm\|	141	9	6	17.24	28	MFEDMHPSIMLATMAIFLAM
72	cj1652c	1	out	13	\|ali\|phd\|phdHtm\|	250	0	3	0.71	77	VKIGVFDSGVGGLSVLKSLY
73	cj0154c	1	out	10	\|ali\|phd\|phdHtm\|	274	9	3	13.40	129	MLYFIPTPIGNLSDISFRAL
74	cj0577c	1	out	7	\|ali\|phd\|phdHtm\|	342	8	2	8.81	314	MNKDLLLSSYDYTLANELIA
75	cj0683	1	out	7	\|ali\|phd\|phdHtm\|	145	2	6	2.86	26	MNKAFTLLELVFVILILGIL
76	cj0716	1	out	7	\|ali\|phd\|phdHtm\|	446	9	1	14.00	100	MWAKNSWKNYPIKQQPIYPD
77	cj1346c	1	out	7	\|ali\|phd\|phdHtm\|	356	7	2	7.92	101	MILFGSTGSIGVNALKLAAL
78	cj0453	1	out	5	\|ali\|phd\|phdHtm\|	430	9	2	10.68	323	MKTQMNYAKEGIFTKEMQIV
79	cj1150c	1	out	5	\|ali\|phd\|phdHtm\|	461	9	1	9.00	295	MLEFLSQQKPKILIIGDFMV
80	cj0641	1	out	4	\|ali\|phd\|phdHtm\|	286	8	3	8.80	216	MQNKIDYKNIKKIGLVTRPN
81	cj1553c	1	out	4	\|ali\|phd\|phdHtm\|	500	9	1	9.60	374	MAKKKEIKLEDALWKSADKL
82	cj1094c	1	out	3	\|ali\|phd\|phdHtm\|	90	9	9	24.00	25	MAENSILTSLLPLVVLFAIF
83	cj1433c	1	out	3	\|ali\|phd\|phdHtm\|	368	8	2	8.00	198	MQRFKKWFLSIIKNFKQHEK
84	cj0786	1	unk	2	\|ali\|phd\|phdHtm\|	57	0	9	0.00	18	MVFLIPLLIIIGVIFGIDYV
85	cj0811	1	out	2	\|ali\|phd\|phdHtm\|	308	5	3	5.38	42	MNEEKNYELWLDNYFFKPNF
86	cj0945c	1	out	2	\|ali\|phd\|phdHtm\|	447	9	2	11.24	63	MFDKLEKILAYDNVFLSGGA
87	cj0079c	1	unk	1	\|ali\|phd\|phdHtm\|	268	0	3	0.00	21	MQKIIVFILCCFMTFFLYAC
88	cj0177	1	unk	1	\|ali\|phd\|phdHtm\|	283	0	3	0.00	21	MKFYTILSILFISFMLSACA
89	cj0456c	1	out	1	\|ali\|phd\|phdHtm\|	319	0	2	0.00	171	MLFLLKKIFPQLFISIILED
90	cj0538	1	out	1	\|ali\|phd\|phdHtm\|	185	2	3	2.63	144	MKYQLRFGGEGGQGVITAGE
91	cj0566	1	out	1	\|ali\|phd\|phdHtm\|	488	9	1	16.00	345	MENICQFIIENIDKNSLNTK
92	cj0769c	1	unk	1	\|ali\|phd\|phdHtm\|	220	0	4	0.00	18	MKIIFLTFFIVINYIQAASL
93	cj0939c	1	out	1	\|ali\|phd\|phdHtm\|	126	9	8	10.95	80	MLIIGHKLLKNLDFSFIESV
94	cj1195c	1	out	1	\|ali\|phd\|phdHtm\|	392	8	2	8.00	316	MIIKNAKIYGDSLQDIEIKE
95	cj1275c	1	unk	1	\|ali\|phd\|phdHtm\|	397	0	2	0.00	21	MRKNILIFFCFFLFVDISLA
96	cj1281	1	out	1	\|ali\|phd\|phdHtm\|	31	9	9	11.11	22	LHFFLRGFDKFKILVYNYSF
97	cj1328	1	out	1	\|ali\|phd\|phdHtm\|	384	0	2	0.00	126	VSKRKICIVSATRAEWYLLR
98	cj1451	1	out	1	\|ali\|phd\|phdHtm\|	229	9	4	14.33	169	MTNIEILENMLKLQQKLNDE
99	cj1488c	1	out	1	\|ali\|phd\|phdHtm\|	87	2	8	2.90	51	MEHLSIVFDVIKNLITFDLA
100	cj1674	1	out	1	\|ali\|phd\|phdHtm\|	286	9	3	20.45	71	MKKITIAHSPDADDIFMYMA

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