--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in C. elegans --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 CE06701 6 out 1 5170 2 0 2.67 424,922,2023,2634,3367,4134 MEIKYISFGGGDGGSVNFRK TEGNVTRTTFHREHDQQQPH 2 CE07282 5 in 32 309 0 0 -0.10 40,143,196,235,294 MDIDELELLQEEREEQPIRY QTVYYVGSAEKILGLEKGSR 3 CE02268 5 in 12 296 3 1 -3.25 89,129,186,228,283 MKIPDLTNYEHLIGGLCGGV AVVTFLTYENVKRLVGMTKQ 4 CE00946 5 in 1 2528 2 0 -2.00 270,771,854,1183,1304 MEISETSHNESGPPVQENGI YKHRYIQNTSAAKPVQQSPQ 5 CE15882 5 in 1 332 0 0 -0.19 26,90,161,194,264 MLTRKKFVVFYVTMSFLALL QFRDHNSYFMAKNVGVVNRT 6 CE23457 5 in 1 485 3 0 -3.67 122,226,270,397,427 MKFGGLLMLSLVFADFQEDL CLMFRITYLTNVQVDNRQCG 7 CE10358 5 out 39 294 0 0 0.30 35,133,186,223,281 MPHDSNEGKQRPSVVLSLSA AVGVSFTTYEKVLELVGHLK 8 CE01489 5 out 16 328 4 0 4.95 115,163,218,257,317 MPSPCESGKTTNCSGAPSSS PSCAIMISFYEYFKFLFQKN 9 CE06272 5 out 12 337 3 1 3.17 74,128,171,274,330 MYADFIAGWAAEQLYFLLSI RGFVVNAVIFVVYENTYSFF 10 CE02041 5 out 11 301 3 0 3.51 43,97,142,237,293 MHESGEPTTATGDASANHFK FASGCLFVAYEETRKFFHYV 11 CE00474 5 out 9 312 0 0 0.14 47,100,144,240,300 MSGIQPVPGAKPLSMWQQYG ITFMIYDSIIEFLDVYWKKQ 12 CE07745 5 out 1 471 0 0 0.54 119,147,206,393,459 MKTSLLLLETLDLFYPYSQQ WVFNWKIWKKLIFLDNVQNY 13 CE21619 5 out 1 254 3 1 3.68 49,136,179,211,233 MYFSPQAATTECSPAMAAGD IREAFFPDCSVLDTVCRMAV 14 CE22120 5 out 1 424 3 0 3.60 90,112,143,165,363 MALGSIGRRSIRNEMVNAAG FSPQFFQSQNRRRHAIRVFY 15 CE03474 4 in 107 492 4 0 -4.58 18,184,314,460 MSILIVAFLVSITVYIAYFY PVCGAVLTTKPYICELVPQA 16 CE08567 4 in 103 493 3 0 -3.66 18,182,317,460 MLFAQLVILVIIVMLFLCRF IDVITSSLRAPKPFTVRASR 17 CE12584 4 in 102 494 4 0 -4.23 18,184,319,461 MFFILVLVLTGISIYLFHLL LDKSKGITPRKFEPVLSRRH 18 CE17510 4 in 3 448 3 0 -3.15 22,288,351,448 MRFCFYFALFSCLVINILAD TKFSRSPSILISSFAIFYLI 19 CE02056 4 in 1 464 3 1 -3.56 19,232,259,421 MKLLLLLLILTISFCYAFNN DSSTIEVFDQFLRANIDFEY 20 CE06371 4 in 1 306 9 0 -23.49 24,55,77,226 MVIYMKRKLFVFFITLVAFL QSELSKVEKAQASINCSISK 21 CE08458 4 in 1 318 8 1 -8.04 153,191,262,300 MCYRLRARKVCRSLRSAVDK HFKCFTIDHTDEFPALSVYK 22 CE17422 4 in 1 464 3 0 -3.53 25,141,204,265 MDNRKFYVFLITFSSIFALF CRSQMDDLTEWIYDETENVF 23 CE18360 4 in 1 380 3 0 -3.38 77,99,128,156 MALESIGQRSKQFYYDHAAG FSSEFFYSQNRRRLAIRVFY 24 CE21493 4 in 1 487 9 0 -9.03 22,159,259,482 MRGPFMFILGVIFSGFLFSM GIFLSPLVVIGAIFRKLTMK 25 CE23710 4 in 1 163 7 0 -7.54 34,76,98,139 MSHIGQARYQKIINYTLVQV NRKLVLNLSTINSTLPSKLQ 26 CE09502 4 out 36 300 2 1 2.12 123,182,221,285 MNGGLAGIIGVSCVFPIDLV QTVYYIGVAEKILGIQKATH 27 CE05519 4 out 31 310 0 0 0.38 82,117,214,270 MSALLDLFAGSLGGAAGVLA KICAESQLLPFEELTLSYLI 28 CE02546 4 out 27 665 2 0 2.99 107,151,254,339 MAVLSKLQLLNSTLTYKNWS MDGRGSYRFEQIDDQSDQFG 29 CE02547 4 out 27 661 2 0 2.19 102,148,247,333 MAVFSKLQLLGQAIPPKQYA MDGRGSYRFEQIDDQSDQFG 30 CE03096 4 out 16 269 3 1 3.27 72,110,203,259 MPSEEGSVVRWLVCGATAGL GGGFVFFGAYETAMHFTKFL 31 CE10794 4 out 16 330 3 1 3.86 86,126,226,299 MSDVLLNFIAGGVGGSCTVI YFGIGGHPTPSTEVVPLPHD 32 CE01783 4 out 2 285 2 2 2.43 145,193,222,270 MKLLSASHFTRRLAFISNLS VAPCMSEFSRYSFPVMLHAS 33 CE04574 4 out 1 344 3 0 3.97 157,196,283,309 MTEVDIIDDEFILTYNPPND KIIKTDEKKVFGIRHCAHET 34 CE08159 4 out 1 413 0 0 0.74 93,288,343,401 MRKIEELIQRNTHTSRHIGL VPATTIYQDMIRFYQHKGIS 35 CE16242 4 out 1 496 7 0 7.54 20,74,417,495 MKFTPICALIALLFSVNANA SGAPRIFVIISFYFFIVLRL 36 CE18791 4 out 1 439 2 0 2.03 22,52,253,342 MTSVCVLGILIYELLIYLNI NETILYICTKYKEKTENANL 37 CE21288 4 out 1 1461 3 0 3.00 400,564,836,1091 MVNEDAPGTSTPAAQSRLQT DEVNVSNTINGLADAVQDMQ