--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Borrelia burgdorferi --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 55 BB0240 6 in 44 254 3 4 -3.53 29,67,110,162,195,243 MNYTKFQEFISEFLGTFILL PIIGAILGATIYEFTLKNNK 56 BB0332 6 in 28 306 9 4 -10.25 28,118,157,192,254,297 MLKFTLKKILGIIPTLLVII IILLISILISDIIYKILDPR 57 BB0333 6 in 23 349 9 2 -9.54 48,166,210,232,284,332 MNSLEKQNEENNSKLERRAW LLFMNFLGDGLRDAFDPKDS 58 BB0653 6 in 5 299 9 3 -10.07 33,161,190,212,258,287 MQRVINFSKYGSNVLIVSAV GTYSSVFIASPILLNLYKKI 59 BB0192 6 in 2 217 9 0 -9.66 51,92,123,150,178,206 MSLFLLTSLPLILKIYMNIR ALIILGLALISMTINNKYTE 60 BB0580 6 in 2 192 2 2 -3.00 28,51,80,114,136,182 MVVLIQILMVFLQIYRILIL FIIIIEQVVFAIRALGTYLP 61 BB0674 6 in 2 348 0 0 -0.38 38,60,89,117,163,276 MVKKFSIFLKAIIIFSIFEL SKIPLEIEKVKKIINKNQEI 62 BB0050 6 in 1 224 9 4 -10.85 33,62,104,145,182,211 MFNEFLWFGVLFTTYSFLII AVAGVLGTPFIYFAKYIKLE 63 BB0071 6 in 1 490 9 2 -9.39 166,195,243,268,319,476 MVRFLGFLYLITTIPLIKSC AIRFTILLNINEKTYKKYIQ 64 BB0249 6 in 1 234 3 5 -3.85 28,55,95,159,204,226 MKNINLILAWLVHIFTASGL ILYFAYLTLASIYLTYKTRN 65 BB0353 6 in 1 599 6 2 -6.69 29,69,113,518,558,587 MKREIYAFLSNFIIFMCFFL SALLFFLIFKIITLNYKERL 66 BB0616 6 in 1 451 1 0 -1.59 139,168,213,302,355,377 MVKVISLKNIHKFAYLKLDP QDIKKIIKQEYKEINDIYFL 67 BB0746 6 in 1 286 3 5 -3.65 25,104,136,165,214,272 MKTDTIIKKIYIVLFNIFIV NIILAIINFKLRKKMKHLIS 68 BB0753 6 in 1 244 9 5 -10.62 44,72,123,157,187,234 MKIDLKQSLSLSKKELKILF ITFTVTFLILSTHSITLKKW 69 BB0807 6 in 1 429 8 3 -8.85 41,70,119,364,392,423 MKILKNSYESYIIAEFFKYF ILPNLILIIAGAILFLRLLK 70 BB0816 6 in 1 316 2 0 -2.22 79,147,197,219,254,298 MMSMNFQNFSSDFFLKKILS IDIVIHKFYDKKDYLEESYE 71 BB0271 6 out 43 697 2 1 2.00 48,88,141,226,267,318 MLDARKNSILGYLGLNNKSD SVLEVPQNIKVNVLKTVEVE 72 BB0051 6 out 3 233 5 3 5.57 27,51,74,109,147,222 MNKDMFDLSLWTGMFLFIYT IIAIDTIFYLFINSWKKIKE 73 BB0073 6 out 1 186 9 0 11.40 23,57,86,122,144,182 MTNNLIACLIINNLTLIHFV YFFIIFILSLIPNIIILIYN 74 BB0418 6 out 1 342 4 0 4.74 21,89,135,205,249,296 MLIKKICFCLLLLQAKIILS IATGNSYFYYDSIGMSITYK 75 BB0416 5 in 8 404 1 0 -1.96 104,284,310,339,395 MDNKKENTETEDCFSHVSKF VNLGSTIGTIVGLKFLLNVF 76 BB0380 5 in 5 454 3 2 -3.45 296,322,374,411,445 MIDIDELRIFLKEKSYSKIK DAITLIAYFNIAKWVLVSYA 77 BB0017 5 in 3 319 9 3 -20.76 61,95,121,153,208 MKKKKKIRCRRIKKKLKLLL NTNEITGGKIITDPISLKQE 78 BB0301 5 in 3 247 9 0 -10.57 34,56,122,207,229 MIFERKFLIKYIYFLTSLIF LKGKPGVIDLRSGDIILLGE 79 BB0652 5 in 3 586 3 1 -3.88 27,444,473,534,558 MKKGSKLILILLVTFFACLL ISVRKSKFISISWSSKYAKS 80 BB0037 5 in 2 250 5 6 -5.20 35,66,110,132,216 MIIVFMKILRSIITYFNVLL KENLTSIIRDQIVKKLETIK 81 BB0442 5 in 2 544 8 0 -8.61 30,358,431,483,530 MNQSRRILRTVYLSLFLIGL YWITTNIFTILQQYYIKMHL 82 BB0079 5 in 1 220 9 5 -9.49 84,107,136,167,199 MNIDYFIKNKILHNSGINYQ SSMKATKKIGSQKNIETING 83 BB0081 5 in 1 416 0 3 -0.73 46,288,329,352,402 MILRLPEITKIAYLIFKNST ILTTLIPLNIVSNLKEKEIL 84 BB0170 5 in 1 682 9 1 -23.71 35,433,455,580,605 MVEKNRRESSCSKRRLVIFF SYGLQGWIHKNFVVSLKDDL 85 BB0173 5 in 1 341 0 1 -0.24 32,83,113,196,335 MKNLIEVLMLTFNEPLYLFL LAFCLLLVYFIFSKIFLKEI 86 BB0373 5 in 1 255 7 0 -7.08 30,57,79,199,249 MVEKIRLGFNIIFLGLFIYF SNLFFVVFYYIYDFSKKDVF 87 BB0413 5 in 1 207 9 3 -13.64 42,64,108,174,198 MMFDEFKRTILREDIKYEIF LFLPLVVSASSYFLTSFFYS 88 BB0717 5 in 1 160 9 0 -11.15 18,46,81,117,143 MATFFTYFISSAFLGKIFQH NFLYPIQNYFTRNFYSFKED 89 BB0469 5 out 6 170 9 3 11.69 28,59,88,112,159 MSAKSKQYFNIFVFIISLIF VIGMILFLVYDFFIKRKVLN 90 BB0721 5 out 5 209 1 3 1.59 40,62,107,149,195 MNNLIKVITPNKITLVRIAL AILSFLEYVLIFLNVKKYEN 91 BB0250 5 out 2 204 6 5 6.05 36,78,130,158,189 MTKMYINTIIEYIDSNIAYS IATTIIIYVIKKNKKVDKNL 92 BB0451 5 out 1 177 9 3 12.18 18,67,96,129,172 MILINLFITFLKIGLLNFGG FYNKISPALVIILSGFFYTL 93 BB0452 5 out 1 234 8 4 8.59 78,121,150,182,219 MTQYFKDTIKHIFITAAQQQ LLIFFLVYTFKYITIKKILT 94 BB0275 4 in 27 254 1 5 -1.37 68,111,207,240 MRKCFNFFLFFSVTSLSFAQ ILFVMVDGWTLITSGLIKSF 95 BB0257 4 in 10 787 6 0 -6.47 36,63,97,137 MKDFYQYFQFLFFFMLSVIS IMEDMGYVGPVNGSKPREVL 96 BB0281 4 in 9 260 6 4 -6.80 25,48,169,200 MNLASIIGWGVGFGAILISM KLMTFLTPKDRSQLNSSIGG 97 BB0246 4 in 8 341 9 1 -11.25 32,54,85,201 MKKRIRFKIILGFKGILKFF RVGSQVINPDMYLNLATGAS 98 BB0272 4 in 7 372 9 4 -10.43 73,123,185,223 MIKDEFLIKSWYIPLDFFSA EYWEIVSKILVRVYSITKKF 99 BB0001 4 in 2 190 4 1 -4.07 63,120,154,188 MILMKYSAILLICSVNLFCF YKLSTSFKEFILLDLGISIF 100 BB0234 4 in 2 275 9 4 -19.10 37,59,165,191 MRDLFFNNVKLISLFVFNVV ISYSMQKVFEYINQNYCTKL 101 BB0030 4 in 1 211 9 3 -9.52 43,74,108,206 MAPYLTFEQRLLRKRQRKVF INKNAIVSFLVLKVVDYKIV 102 BB0304 4 in 1 464 1 0 -1.77 113,209,310,451 MRIKIKDILISSKDVKFVGN VFIVIKGSRFNRLERILNIF 103 BB0360 4 in 1 141 9 8 -17.78 49,71,98,127 MLNSHPKKTQSLYRAGLVVL VYLVFNVTILVLIKAKIKNL 104 BB0409 4 in 1 209 1 2 -1.52 95,147,169,194 MKKTPNTCIFLTLLIISNLN FNISFNFTIRYNFKDKNEME 105 BB0595 4 in 1 208 9 5 -9.26 49,85,137,187 MQKKTFYNTEKYLKSHLMLF NMLTKIKEKKMNKSVKEEKN 106 BB0766 4 in 1 162 6 6 -6.35 28,51,89,127 MIINDPVKITGIVDILIIII SKLLDYLNPGINYLFKISKT 107 BB0202 4 out 3 412 0 2 0.68 18,74,105,142 MLELIIILLFIILSAIFSAS YFIKEIQNNKIETITFIKSK 108 BB0453 4 out 3 280 9 1 9.36 43,92,121,155 MFKEFFIFQDYFNYIIEGVV NVLLDMKIKVPICFVPFDKL 109 BB0157 4 out 1 138 9 4 14.54 31,67,89,133 MIQIYFMSVSLNILGGIILA IGIISITIGIIHFLAAEIPL 110 BB0509 4 out 1 419 2 0 2.18 19,133,160,360 MRYIFLFLIFKSLNLFALES VKVPENLPIVPIPIKANNQS 111 BB0532 4 out 1 295 9 2 16.11 25,49,74,123 MDTQIYELIFLTSFSIFLIV ANILNEKADIASTETDIQNM 112 BB0545 4 out 1 454 5 2 5.94 88,142,266,348 MNALSIDIGTSVLKAALVSS HEEYLEKYQKYINNYSLFVN 113 BB0576 4 out 1 182 9 9 12.61 37,88,122,161 MPKMKGKIMLIKFMFSNINL SYKILQFENTTNINFGNLPT