--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Borrelia burgdorferi --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 177 BB0769 1 in 15 346 5 3 -5.80 99 MKVLGIETSCDDCCVAVVEN RIENYKNQYRGKNNEKNFSN 178 BB0262 1 in 9 417 9 4 -16.00 126 MIIPKKKQRVEKRKKNFLFN NHLHFTIFKNGKTENPMKYL 179 BB0732 1 in 8 932 6 1 -6.31 34 MKLNSPNLKKINTHKLLIYL NNNENEKINNKDVNGEDIQL 180 BB0031 1 in 7 326 9 4 -13.60 63 MYLRRLDKFASFLVHIVEKY KNKVLGRTLIIYLPFSRVGF 181 BB0280 1 in 5 260 9 4 -22.36 40 MALRIKKPSKCDEGSPDYML RRIDILITTDASLSFPKEIK 182 BB0770 1 in 4 293 7 5 -7.27 31 MFVFYIKKNKFIIVIFIIIS PDLNQEFEFDNLLNLYEETI 183 BB0048 1 in 3 56 5 9 -5.71 41 MLNKILDKLVEAYSIIFRTR FKHNSYSQQALLSLENLLSL 184 BB0263 1 in 3 168 9 8 -11.73 29 MRIFKAHKYELASILAACLF DSRDYGFIKIDNILGKIIYY 185 BB0279 1 in 3 178 4 8 -4.72 48 MPNKDDDNLDMGDSNVSRKG SILRNGEIKEIALTQIDIFD 186 BB0106 1 in 2 569 9 2 -10.73 40 MVYLMLCLKIWRVVLKKNKT DEGRLYKNMIDTLRERNLNF 187 BB0150 1 in 2 30 9 9 -11.17 28 MFGCLRIHVFKIYFIFLIIH FKIYFIFLIIHYILFSILLM 188 BB0395 1 in 2 56 9 9 -14.97 51 MFRFIKDSILELKKVTWPKY FVSIFLGIVDYLMFLVVTYV 189 BB0718 1 in 2 599 9 2 -11.00 28 MGVITNFRYKFGIFFLIVIM GIFANQSYEDILKGYRPWYI 190 BB0750 1 in 2 47 9 9 -11.60 45 MFDINFNLKDISVKPNNILS LSWYILIIFIFICFSFNAFY 191 BB0082 1 in 1 432 9 3 -16.00 162 MNSSKTSEDRIKIYLSKLKK EIYPTIEKDFSSIKIYNVMI 192 BB0100 1 in 1 261 1 4 -2.00 86 MKNFKEVIIIFDSGIGGLSY NLTFYQNFCKKYNLRFKGMI 193 BB0126 1 in 1 203 2 7 -2.29 25 MAKNNLLVFFIAIIFVFVSI PYENNLYINMANNKILELKQ 194 BB0185 1 in 1 217 4 6 -4.00 93 MVNTLAFEYSYKALIVYCRI DDILSGPLYIRQSDAEVNFH 195 BB0326 1 in 1 931 4 1 -4.00 354 MPDVDKIIQFKREILDNLSN IFKNSFSKSNVLFYENLSEK 196 BB0381 1 in 1 475 9 2 -12.00 395 MNKKMFPKIYYYDQDFIDIY KKEKTLPIPSGRCSMLLDKL 197 BB0441 1 in 1 119 9 9 -17.82 97 MRKRNISLKSKIEIQKIFKE SIESLMKGLVLRCERGIGES 198 BB0617 1 in 1 122 2 9 -2.45 77 MRQADFFVKKCKKIILNNND TLESNKLNKFASALVSLKIL 199 BB0625 1 in 1 697 9 2 -10.22 36 MITLFKILALRKSKTFCILQ KLRDQDSKILANGILKILEN 200 BB0654 1 in 1 380 9 4 -24.00 259 MKFFDFGSLGFYRFFDFQKY EYRSGWEANLKNFGHLFSET 201 BB0661 1 in 1 123 9 9 -24.00 118 MRNFRLAKVNFEVFCEQCGE ILLYLFSSFLFVILFLYIVY 202 BB0709 1 in 1 343 4 5 -5.00 30 MLIKIGKVFILFFFLGSILS SEYSSHLLGAKDYIKNFITK 203 BB0751 1 in 1 357 8 3 -8.24 51 MDLLDLLEKEKQINKNKGVF KDDISSNDNQEDHHEHHNNA 204 BB0783 1 in 1 394 9 3 -21.33 24 MRKDLIFLFLIVLIIASVVI INPDVIVILGDDFDGRYVKS 205 BB0846 1 in 1 37 6 9 -6.25 34 MVIKNSNQHDPPYNFSNPIA NPIAWLFILFLNLHVTTIDN 206 BB0016 1 out 9 125 9 9 13.24 22 MAMNYARFAVLIVLLFFYIW FKNVFVAGTLKDMPQAKKEV 207 BB0745 1 unk 9 222 0 6 0.00 18 MYIFYFCFVFIMFYNFFMIN CTSRNVNCDNCFLEKFAPRV 208 BB0651 1 out 6 105 9 9 24.38 39 MYSMGGFVFLLQEFSGNSSF SPNNEAVFIKNSIDKVLSEK 209 BB0204 1 out 5 323 2 6 2.71 32 MKFIINLLLSTIKIITFTVI KDKRKIFSTDMDFFQYLHKR 210 BB0506 1 out 5 263 0 4 0.16 167 MKGFRNNLLNILCKRYPEKT VVKSSVLRIASSMQLLSNIE 211 BB0203 1 out 4 311 2 4 2.09 35 MFDIKQIFNKTYEYLIIIIT KDNIELIDKNFKNFLPFKEV 212 BB0474 1 unk 4 33 0 9 0.00 26 MAYLFLINLMFLALKIDFRF ALKIDFRFFVNLFLSVIVCL 213 BB0052 1 out 3 218 9 5 12.20 173 MDDDVLKRIGVLSKFITDEK RLKYYRQVVKNYQFIENLIN 214 BB0331 1 out 3 51 0 9 -0.76 36 MSNLIFNKMYFLFLIFYLKF CKILSKIIIESYTLFMYFCF 215 BB0504 1 unk 3 510 0 2 0.00 21 MIYIIFSSIFAGFILGFLVR RYPGKIKVTIIRETRVIEYA 216 BB0692 1 unk 3 37 0 9 0.00 28 MVFKAKWLFLYLLFLNPINF PINFIDEFLCKNDFIPFFVK 217 BB0286 1 out 2 207 0 8 -0.67 34 MKVNNFLSFFFRAFFLLFLI SLMDSKKAAILIRKMSVSSL 218 BB0635 1 out 2 481 9 2 14.68 134 MKNLSLFTDFYEISMMNAYF VSISKNLRKLKNKLTKDIKN 219 BB0748 1 out 2 152 9 9 10.40 133 MTIYKKIAMSFYSGILSYFI CIIQTKKITKINKLASNNSK 220 BB0260 1 out 1 337 9 4 18.67 307 MKGFLAIKLSNNEYYPVLNL VSYYFEYDKNRIKRYEKDQY 221 BB0261 1 out 1 460 9 3 36.00 25 MLSLFIVISSLTVFILVFLF DLVEGKKLAQILKKINISKY 222 BB0310 1 unk 1 45 0 9 0.00 21 MFFLIKIFLGCCLNVWFNLI RGFYMFYYKDFNVLFIRRVN 223 BB0320 1 out 1 35 8 9 8.33 31 MRSSVDRIINFLISFGGFIF FGGFIFYSLLLIFYLTFMAL 224 BB0542 1 out 1 192 5 6 5.50 34 MDNLNSINSIKDLSKFFMYK KELNHPIPSGAEEIVSSILK 225 BB0546 1 out 1 286 0 5 0.89 36 MKDLNENNDNNKGFFVALTS DFKKIAGIGEFKETYILPVN 226 BB0555 1 out 1 155 7 8 7.23 65 MTLINFNLNGESISKKISLS MDVNTFLSLYLKAEELYRKN 227 BB0664 1 out 1 227 9 5 24.31 31 MLHNTMLIARIMNINTLFYG ESNNELKEDQIEEELQEIKA 228 BB0665 1 out 1 319 0 4 0.00 269 MRLPGSGYSYTVIQSKNNYS SLRFKGDLKSAIELWENDII 229 BB0667 1 out 1 183 1 7 1.25 50 MKNNISDIFFKYNVVIYKFL YPGKIKKIVILVEGCILKEQ 230 BB0687 1 out 1 317 3 4 4.00 128 MDLISFSVPGNLLLMGEYTI LSKIISIVLENEGIKFESDK 231 BB0794 1 out 1 1465 5 1 5.71 33 MNLLFLRSKTFILLILPFFI FMKKGLDGIGNNIGISWKFK 232 BB0796 1 out 1 185 2 6 2.44 27 MINAMEKFVFFLILPLFFLL STVDITNDVVKHLLEKDNKN 233 BB0817 1 out 1 468 6 2 6.00 298 MKVDFDDLNNIFFVGIKGSG ISGDLFITMGAGNNFILHDF 234 BB0848 1 unk 1 34 0 9 0.00 24 MYFCIIDLEFVGVLPYFFIY LPYFFIYKFGEFYFSFFGKW