--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Bacillus subtilis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 210 fhub 9 in 34 384 4 3 -4.04 81,132,166,188,219,263,314,352,374 MHFHFCSKHSIKSAEKSDIL LTSLIGVPFFFYLARRERRG 211 yfha 9 in 34 343 2 3 -2.76 36,86,118,148,177,223,274,311,334 MKLRFGVTAAEKKAWIVFLV VFTAAIGAPYFIYLLYKTRN 212 yfiz 9 in 31 333 2 4 -2.06 31,80,114,137,169,213,265,301,324 MICKKASSKWIVLVCLIFIL VMTAIIGMPVFVYIARRGAK 213 yvrb 9 in 31 353 4 3 -4.26 38,94,128,154,185,229,280,316,341 MRKAFTRIRLRNNRYAAYII LAGAPVFALILIRQHRGGRS 214 fhug 9 in 30 336 3 3 -3.06 29,80,112,143,172,218,270,306,329 MKTKTNKPLIVMAVTFLLIV VGLVISVLGAPYFIYLLMKA 215 glvc 9 in 24 527 2 0 -2.83 30,77,104,153,193,231,328,350,403 MMQKIQRFGSAMFVPVLLFA QVIIGLSVPQMRERVEKILN 216 feub 9 in 21 334 2 4 -2.88 29,79,113,135,168,211,263,298,321 MYSKQWTRIILITSPFAIAL SIIGVPFFLYLIKRKGGEQN 217 spove 9 in 20 366 1 3 -1.29 30,65,95,129,171,203,293,329,355 MTTKKTSPDLLLVIITLLLL SLTLMLMAVGVLLNVSRYSR 218 yxac 9 in 6 301 6 3 -6.88 25,54,80,148,176,207,238,263,291 MKVIRIILQVLILYVFFMIG AGFSGVILGPLFLKCVAYAA 219 yvfl 9 in 5 418 1 0 -1.52 48,89,144,209,244,266,295,348,405 MQHRQVALLLSIIPGLGQFY VFVISIALWQFRQTKSFKEE 220 yuxj 9 in 4 356 4 0 -4.67 21,66,114,136,190,218,265,287,338 MERLCVRHYILMAFLVSPFW AGACMLWIMQKLRKDSYAKA 221 ykcb 9 in 3 716 9 0 -9.86 101,133,176,198,224,395,434,510,539 MEKKKRELDIVLLLILLASA KMGGPGGMNQSATLYELHAD 222 ywkb 9 in 3 319 6 1 -6.50 23,61,90,149,200,230,259,283,319 MSILDILILLAPIFFVIVLG AFVVSAILSLISLPIIIALT 223 nasa 9 in 2 421 3 2 -3.85 38,69,98,121,162,184,232,265,296 MKLSELKTSGHPLTLLCSFL FRILTDTRLCVSFLFSLDFQ 224 spoiiiae 9 in 2 405 6 0 -6.70 21,128,158,192,228,267,298,343,377 MKRFQWVLLLAVLIIAGRAE PYCHNHSRKPHDDDEMKEAG 225 ybas 9 in 2 283 7 1 -7.14 18,50,85,113,141,182,208,240,266 MGCAWIFAFITFAGSLSANF LAALFGYMLNRFELKPMLQK 226 yclo 9 in 2 315 4 3 -4.64 26,59,89,118,146,193,240,281,306 MRNQMKIALLVGLAIVCIGL IINFAGGIYFIYLLLKENKS 227 ydek 9 in 2 287 1 0 -1.46 29,53,87,109,142,165,194,228,278 MNKTTNGWINGFIGVLIFSG ALVAVNIAVIMCVAAARRFA 228 yetk 9 in 2 330 1 1 -1.90 48,75,110,164,196,227,260,283,313 MKKRLSLDRRFLPYIKKAGG FVTVIKKKQPDAYPAAEEKT 229 ytvi 9 in 2 371 5 0 -5.97 30,52,90,189,248,277,303,332,359 MNQSYITIFFRTLFVISMTA QAFITTGALKEIWSYITVQQ 230 yvbv 9 in 2 305 2 3 -2.13 27,51,84,114,158,200,231,260,284 MKQLPKTRTALLLAFLVIMW VNTKSKAQKAAAIGINEKAA 231 yfkf 9 in 1 391 1 2 -1.91 28,60,96,172,255,291,313,344,373 MSRFHFFILVLLVSISGFSQ LALVLGKPKSWSPAETYSSS 232 ykos 9 in 1 564 9 0 -14.61 32,115,140,202,233,295,329,366,388 MLRLMRQQKKETYYLWIALF ALVKTFDHKDSAWRIYLYET 233 ykrp 9 in 1 340 9 0 -10.16 32,55,90,128,159,181,205,241,305 MSKSRDSYFDNAKFLLIFLV ELRMTSLLQFVRGTGKNAYL 234 yrdr 9 in 1 321 2 0 -2.63 31,55,91,119,149,176,223,253,293 MKKGQLFIGALTCLVASMSW YQRKEDYKQVLQKEKTNLTI 235 ytrc 9 in 1 328 2 2 -2.85 36,78,132,161,190,231,253,295,318 MVDRGLLYREWKQNQVVILL IIGAVAGFFVSYFSIYKKTK 236 yufp 9 in 1 348 6 1 -6.58 31,53,78,128,152,208,254,299,334 MVKRLSHLLVPLIAIILGLA FVASSYAIRFVMGKLKKKGA 237 yxxf 9 in 1 311 9 2 -9.34 34,60,97,120,146,177,212,259,291 MQQDPSISSKQKSTAVIKMV LVRRQGKANVTAEGTDIEQI 238 rbsc 9 out 25 322 5 3 5.00 42,74,106,135,189,237,269,292,315 MKTEQLQTEQKRIHFDGVMQ QLVVKGIVILIAVLLDRKKS 239 ylao 9 out 17 403 2 2 2.35 32,68,97,131,173,205,305,341,368 MLKKMLKSYDYSLIFAIVLL KKEPLAPKGMKKKQLKKTVY 240 ykab 9 out 14 328 1 0 1.73 22,62,102,132,156,214,237,284,325 MDILLILTILIVICALAFDF SLHGSSRFRFQRHLVPSPTL 241 mray 9 out 11 324 4 2 4.84 25,72,94,135,166,208,247,269,320 MLEQVILFTILMGFLISVLL VTFWAAGLLLAVLGIYIEVW 242 feuc 9 out 10 394 0 3 -0.01 25,74,106,136,168,214,265,301,327 MAKKYALFIALILVVSYFSL QFFVPKPNRITRKRLSTAKA 243 cyda 9 out 9 468 9 2 12.42 36,72,113,145,201,233,349,383,432 MSELVLARIQFASTTLFHFL HHDVPVSTDPFSQEVYHGIS 244 yufq 9 out 5 319 9 3 10.54 30,57,89,117,172,221,244,266,300 MDIVQILSIIVPATLVYAAP GFIGRADAPKANGVPYIKGK 245 yded 9 out 4 319 9 0 16.27 58,94,123,148,184,206,240,270,293 MNTSNRRMGLFYVITGATCW EPSMESEKSILKIRNHANRD 246 ytha 9 out 4 438 9 2 14.72 31,69,108,138,193,232,335,371,417 MARSLFGTTMGFHIIFATLG YVLLYYFRKHPVDEDLNTAE 247 yhjn 9 out 3 384 3 0 3.04 41,112,171,215,244,277,303,325,360 MKKDENLLKDLWFIAISAAG LLHHLHGEKKDKKSSISGSS 248 yvac 9 out 3 631 2 0 2.56 56,91,125,169,364,386,422,444,482 MNKTAANNQRIMPIVKDAFR YPRISKELSALYSGLRTAFE 249 ecsb 9 out 2 408 2 1 2.19 47,75,131,153,201,306,328,374,396 MNNMLDIWQSRLQEHIKETR VLIFVVLPAYMTTRLKKHGK 250 ytrd 9 out 2 325 3 1 3.51 36,77,130,161,194,223,251,290,317 MPDSGLLYKEWRQNKVALVI TGAVIGFLISYFAIYKKMKL 251 yxdm 9 out 2 622 9 1 9.52 40,77,133,174,244,297,521,578,612 MTFLQFAYKNVTRNKRAYLA FIFQLLFFLAVRSSYLKKMN 252 yfis 9 out 1 417 9 2 10.17 70,104,179,239,275,299,329,369,395 MEKPLFRNQKGLMTLLASQT GKKIAESRRYLVTKSNKGAQ 253 yjla 9 out 1 324 6 3 6.75 21,55,91,113,152,178,217,247,300 MKAIVIGILASLFFAVTFIL LHTFASQPRKPKKKAQSNLT 254 ykvi 9 out 1 347 9 0 12.92 58,102,137,161,211,235,269,312,334 MEQSKGSASQLAFVYVGTVV YVSLAFIGALLCKKAPRRRS 255 ythb 9 out 1 346 9 2 10.38 28,78,102,137,182,222,254,286,332 MEISTDALIAISIIWGFVFI PGFFFFWKMFMRDKRYIRQE 256 yxjc 9 out 1 454 0 1 -0.91 28,73,113,135,196,257,305,351,389 MELIIILLALGLLMFTAYRG SGRDGFDPPAILSRYFCDHA 257 yyad 9 out 1 338 9 3 9.53 56,100,130,152,194,226,266,305,330 MLWRAGMKWMLLILGSLIGA GMLNLYLLVCLLLYPILSKW 258 yyca 9 out 1 685 5 1 5.13 94,128,188,224,384,426,476,498,527 MKTKRFDAALILILLAAAFL SVQGMRRGPGGESQQTLYLV 259 ylob 8 in 183 890 3 0 -3.03 69,91,266,288,723,785,851,880 MKFHEMGQTDLLEATNTSMK VIGMSAIPTFLLAGSLLTRK 260 yfme 8 in 34 333 3 4 -3.30 33,82,124,167,212,263,299,323 MKKTTRKQKRPLLAILILAV LTAVIGAPYFLYLLKFEARK 261 yfmd 8 in 31 333 3 4 -3.53 34,83,126,170,213,263,300,323 MYHSAKRRSSSRLMMFIIAL VTAIIGTPFFLYLARKGRNL 262 frua 8 in 23 635 3 0 -3.32 329,370,410,449,484,526,586,623 MKITELLTKHTIKLNIESKE VIGAVVMAIILGIVKKPVTE 263 yjdd 8 in 23 589 1 1 -1.82 150,192,240,278,311,354,413,451 MKLLAITSCPNGIAHTYMAA SEAVREPSVAFGIKRSGVDW 264 mtla 8 in 20 610 2 0 -2.98 45,72,109,162,188,271,313,337 MQQQEQQQGGMKVKVQRFGS EHLDILSNIAIICSEEETLN 265 ytgc 8 in 14 435 2 2 -2.78 38,63,85,116,164,207,248,275 MFESLWLQLQHPNTQWVLAG RMPERRKASHDAEKGQIANE 266 yvdh 8 in 8 435 7 1 -7.17 52,94,153,217,251,310,363,421 MNKHHTLTKQKRKAGLLSII VIGISLIAFKKSNAFGNEEV 267 cydb 8 in 7 338 9 2 -9.51 23,87,139,176,215,245,275,321 MASLHDLWFILVAVLFVGFF SQIWSYYVFRKRVSHKEPMT 268 ytgd 8 in 7 295 2 3 -2.07 30,52,75,106,164,205,249,272 MSFEAWIIATGVLVGVSCGL PANGVITKKLRTLNMQKERA 269 spoiie 8 in 4 827 2 0 -2.62 59,89,118,143,177,211,251,325 MEKAERRVNGPMAGQALEKL NTPKWASIPVPAIFQNKQEI 270 yuef 8 in 4 369 9 3 -14.04 36,58,94,180,248,291,323,345 MLKSKVHFWTLQILFVLLII IVRLIKLRQRSRLEENAKPA 271 yune 8 in 3 273 3 4 -3.54 29,68,97,122,183,208,236,267 MSFVILVVLGLIAGTVGSLI MIMRIVLILIGCQLIYEGIF 272 yxah 8 in 3 402 1 2 -1.84 36,86,133,168,242,306,345,371 MSSLQPTLTNERIGVLDVLR EWLWRSATYLSWQPIAKKTK 273 ctaa 8 in 2 306 9 2 -17.04 26,77,115,139,180,235,268,292 MNKALKALGVLTTFVMLIVL FGVLCYFLLLIARFRYESRQ 274 yoje 8 in 2 263 2 4 -2.46 30,55,95,122,159,199,233,258 MQHAETKKGVIYTAVSFIMW VGILQYIAPTITLLIGLFCL 275 yrko 8 in 2 405 2 3 -2.60 41,79,117,158,224,298,341,365 MIVQKEGRGQPVSLRERVHF YGKVNGSPKATPLHSEKSIQ 276 ycnj 8 in 1 541 9 0 -17.18 24,163,200,246,274,312,353,386 MKRNRWWIILLLFLVFLPKT IKVHGLTGDFNEINIMFTKT 277 yjna 8 in 1 254 5 3 -5.91 29,58,96,119,171,201,226,254 MSVSIILMGLFVGALVGLTG SPRPLQFIMASIILVSGLKL 278 yndj 8 in 1 546 8 2 -8.13 38,95,141,164,198,224,253,285 MKRNGIVSALCFIGFLAAEA GIKFLTVHYSITHINQPIER 279 yrkj 8 in 1 261 9 4 -9.10 31,70,96,124,174,197,226,259 MDIAFITTLFIIGFIGAFIS LQWVLAQLIGATAIKIWLEL 280 ythq 8 in 1 385 7 2 -7.01 45,84,135,157,193,215,326,383 MNGRTLFFRRLFDYYKYQFK ILHYAFAACCFLAAAVSLLF 281 yvax 8 in 1 323 9 0 -18.88 44,89,111,134,175,241,270,292 MKILNSLEGYIDTYNPWKNT KRNFKRIGGESVKFLTKLFH 282 yvod 8 in 1 312 5 3 -5.10 33,59,83,110,133,189,270,293 MKKIFLAGLAAGFQTTWTLG TMAIAHTWKKWKPSAVGKEA 283 yyak 8 in 1 299 9 2 -15.83 43,85,124,159,193,223,248,286 MNSFIRPIEGNNTLWRYFFA LVFAGIALWYHKKSKSKQQG 284 cdsa 8 out 9 269 7 0 7.04 38,73,97,125,154,191,217,269 MVDMKQRILTGVLAAIVFLF DRFDSFLFVMPFLYFLLALF 285 yocs 8 out 9 321 1 3 1.57 50,94,116,150,180,213,243,291 MDIIRKISHFAGQTFGIWVI TYWSKKVKKKQAGSKSSNLS 286 ctab 8 out 8 305 0 0 0.40 48,77,137,176,202,236,265,302 MANSRILNDTAIDGQIEETT FVYSLNYMTIYFVAMVVLTL 287 yjdk 8 out 7 329 0 2 0.07 59,90,150,189,215,261,285,325 MQFWGRRLFLENTRDSAAIS IYFCLLFFIMMIDSFMMFLI 288 ywab 8 out 5 311 1 0 1.69 58,80,131,155,198,251,273,309 MNQTNKGEGQTAPQKESMGQ AQTNTFFGFLLSIGLLISYF 289 ycln 8 out 3 316 2 1 2.43 21,65,112,154,197,247,276,305 MKLRYLFILLIILAVTSVFI MVGIIGSGIFLFMLLRRKAY 290 ycgr 8 out 2 294 0 5 -0.63 34,75,109,137,199,235,260,286 MTAQSSFLQLNSIFISILIE VFLLITYIVVIVLAGSLLVK 291 yqew 8 out 2 310 3 3 3.78 22,75,123,152,195,224,261,302 MNRMLILISFTALILSFLAG LLFLPLTNLFYRLIHLLIPA 292 hemx 8 out 1 276 9 3 20.43 30,59,90,112,155,211,236,267 MIDTAMARLNEGTIVIYALS FLVLMINYFLLGSLSQFHWF 293 ywbl 8 out 1 481 9 0 22.24 21,244,279,307,360,389,415,464 MARGLALILFSLLMVFGSAA LLIALVSEAAKHFTNGKELT 294 yxki 8 out 1 562 4 1 4.21 26,49,71,120,150,303,424,447 MPMGTHLFLFMLLGLGFYLI KGHGVLKRWLRDRLKESITL 295 resc 7 in 19 352 9 1 -9.75 28,54,80,119,280,314,344 MGQHWNHPFYCRFFLPPRIF AIIMFNLIFVNLVLAGLHSY 296 yqgh 7 in 10 309 5 2 -5.62 56,112,151,182,235,264,300 MINNRENMSVSERLISSRQN LLVMSFLFILLIRYLSSRRK 297 amyd 7 in 7 303 3 3 -3.95 44,103,136,158,186,234,291 MSEIARDVHVKQVKPKKQSS VILIISFCALAYFKRKETEM 298 ywbg 7 in 5 241 9 3 -10.21 18,47,80,109,134,162,221 MFIGIVSLFLTVLVYLGAKK CFHLCKKLSSRGQFFLCASP 299 yplq 7 in 4 213 7 5 -7.39 35,57,97,124,152,174,206 MFTIKEEIANAITHGIGVLL GGSAAMFFCVLFYCVKVPFL 300 yqff 7 in 4 711 9 1 -9.02 42,296,328,369,401,433,466 MLKKKAKTKSSSKKWSSFKN ATLKGIFHSRIEYPEATKKV 301 yrhl 7 in 3 634 4 0 -4.10 55,168,190,259,288,347,401 MYHKTQHHRYIPGLDGLRAF VHLVPKGAKTLTALIVQAMK 302 yuba 7 in 3 388 9 4 -11.32 41,70,108,194,260,306,349 METLQTWSGRFKRFFLDNKF FKMQSHLYDEEKNENTPGHK 303 yybs 7 in 3 309 7 4 -7.30 34,80,122,190,232,262,295 MKQTRALMEGAILISLFAII MAAIRILGVLDMGFHIRNKV 304 ypdc 7 in 2 218 7 2 -7.32 18,52,85,126,148,177,200 MFAIISAGIAPGIALLSYFY FLWWFGLRKAKKARSVNMMQ 305 yrri 7 in 2 353 4 4 -4.11 36,59,90,178,247,288,338 MLQKPVQLLLWVAICLLVLL VPATAVLKVMMIHFLRMRTE 306 natb 7 in 1 386 7 3 -7.55 37,193,250,292,322,346,374 MLSHIYKKEMIDALRDRKTI IAIFFLLARACFLKDKWVLP 307 ybct 7 in 1 311 2 1 -2.10 68,90,129,166,238,265,289 MTVELQGGRISYIGTEQEIL PLWQFKLQKHMHHDQPKHTS 308 yddg 7 in 1 815 9 0 -11.85 27,146,174,338,360,390,419 MVVMKKKRILIVSAIVLLFL EIARRSSSKVEDRLRRDERT 309 yhfn 7 in 1 426 9 2 -18.27 26,83,119,166,198,305,347 MRKWIAAAGLAYVLYGLFFY MERIQHAEKEENAPEHQDAD 310 ytnm 7 in 1 300 1 0 -1.95 22,44,66,121,215,252,281 MKKLIVFAFIGLLSQLIDGS LSKIGNRNIVKTAVDVHLKE 311 atpb 7 out 38 244 5 1 5.15 35,94,131,165,187,209,231 MNHGYRTIEFLGLTFNLTNI QAFIFTMLTMVYMSHKISHD 312 arap 7 out 10 313 0 3 0.28 56,110,140,162,197,245,301 MKPVKTGTVHPVPSAAKQSG IVILVVSLISLKLSGSFKGE 313 yubb 7 out 9 276 7 2 7.10 70,113,136,179,212,250,272 MTLWELFVAAILGIVEGLTE KLVPFAIYRIILGVILLLIM 314 lgt 7 out 8 269 9 3 18.73 36,73,111,134,198,220,255 MNEAIEPLNPIAFQLGPLAV LAVAAIIFRRVKGYSKERYA 315 levf 7 out 6 269 4 4 4.91 19,58,83,112,163,198,230 MSSLQIILLLIIAAITGIAS AAASDSGSVAVYDDDDDDLD 316 ycea 7 out 6 280 5 5 5.81 31,72,107,151,191,235,264 MEMFDLEFMRRAFLAGGMIA FAVQGVWTFIKKEAQRKKRS 317 ysbb 7 out 5 231 9 2 10.37 27,52,83,114,137,166,225 MESTMSPYFGIVVSLAAFGI VVVVGVVTVLVIPVFVQLIG 318 yvgt 7 out 5 202 8 1 8.51 22,45,79,108,131,162,184 MAWELLSVIGIIAFAVSGAI CRVCSYMFNWKLPNRSFRLD 319 opuab 7 out 3 282 8 3 8.50 59,86,111,154,176,229,268 MDRLPRIPLADIIDRFVDWI AITLDRITQNIKVKKKSRGN 320 yhap 7 out 3 419 0 3 0.80 38,205,253,302,339,362,393 MNKFWIMLSHTYKNKIMAKS LIYGNSSAFKAIKQALRLAK 321 yjka 7 out 3 250 9 2 9.73 23,54,76,108,131,205,234 MDYLSLSLTMIFVLIALFLS ILSVLTYPSLFTVHQQLKQN 322 ctag 7 out 2 297 9 0 14.71 30,63,94,134,166,208,274 MNQLEIFGFRAMWSPYLFCI VKKEREKDGQEEPPYIQQTI 323 tagg 7 out 1 275 0 0 0.43 56,92,137,166,195,233,263 MNDLLRILREQITSFPLILR LLLLVGSILHMKFRDKFVDF 324 ydah 7 out 1 269 0 0 0.13 24,51,107,129,181,211,264 MHVITTQVLFIFCFLLLIHS LLAQLMFIPGAYYIAWLTKW 325 ydfk 7 out 1 229 7 2 7.47 20,51,76,114,150,200,226 MFGTIFNTVMIIAGSIIGGI LPSLLIPPVVIFVIHAFGLR 326 ydhb 7 out 1 259 0 3 0.87 26,49,90,115,160,198,220 MLIILVMFLLGIILGFIGAG CRPAVVILNKTKNLTSCQVF 327 yoat 7 out 1 264 4 3 4.12 33,55,87,159,181,207,243 MRAIKQIVHFGWEQALSCLF ASLKQVKEQSPTKAEMDESF